Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_00422 Corylus avellana HOM05D003663 ORTHO05D005327 5.4e-128 461.1 244 100.0
Cfa016035 Carpinus fangiana HOM05D003663 ORTHO05D005327 5.3e-99 364.8 245 82.4
CiPaw.06G032900 Carya illinoinensis HOM05D003663 ORTHO05D005327 1.4e-78 297.0 256 68.8
QL09p023778 Quercus lobata HOM05D003663 ORTHO05D005327 1.8e-67 260.0 254 61.4
Hma1.2p1_1680F.1_g297170 Hydrangea macrophylla HOM05D003663 ORTHO05D005327 5.9e-58 228.4 251 53.8
Sabra19G0059300 Salix brachista HOM05D003663 ORTHO05D005327 1.5e-56 223.8 250 58.0
Lalb_Chr05g0220821 Lupinus albus HOM05D003663 ORTHO05D005327 3.2e-56 222.6 248 54.8
Potri.019G049600 Populus trichocarpa HOM05D003663 ORTHO05D005327 2.3e-54 216.5 250 55.2
TAR374G1477 Trochodendron aralioides HOM05D003663 ORTHO05D005327 1.4e-51 207.2 243 52.7
Lj4g0026545 Lotus japonicus HOM05D003663 ORTHO05D005327 1.8e-51 206.8 241 51.9
Glyma.17G149700 Glycine max HOM05D003663 ORTHO05D005327 2.4e-51 206.5 228 53.5
VMungo0251G1526 Vigna mungo HOM05D003663 ORTHO05D005327 2.0e-50 203.4 231 51.5
Duzib177G0557 Durio zibethinus HOM05D003663 ORTHO05D005327 8.5e-49 198.0 248 49.6
Rhsim09G0213000 Rhododendron simsii HOM05D003663 ORTHO05D005327 8.5e-49 198.0 225 53.3
Manes.09G126900 Manihot esculenta HOM05D003663 ORTHO05D005327 2.5e-48 196.4 239 51.5
CANSAT21G0248 Cannabis sativa HOM05D003663 ORTHO05D005327 4.2e-48 195.7 248 51.6
MBI04_g20973_MAGBIO Magnolia biondii HOM05D003663 ORTHO05D005327 9.4e-48 194.5 246 50.4
CSS0037566 Camellia sinensis var. sinensis HOM05D003663 ORTHO05D005327 2.1e-47 193.4 174 64.9
Nn3g19378 Nelumbo nucifera HOM05D003663 ORTHO05D005327 4.7e-47 192.2 180 58.9
Medtr4g099150 Medicago truncatula HOM05D003663 ORTHO05D005327 6.1e-47 191.8 247 47.4
Duzib106G1874 Durio zibethinus HOM05D003663 ORTHO05D005327 2.3e-46 189.9 242 50.8
Psat4g076520 Pisum sativum HOM05D003663 ORTHO05D005327 3.0e-46 189.5 238 47.9
TWI34G0428 Tripterygium wilfordii HOM05D003663 ORTHO05D005327 1.5e-45 187.2 227 52.0
Phvul.003G226500 Phaseolus vulgaris HOM05D003663 ORTHO05D005327 4.4e-45 185.7 232 50.0
Oeu027885.1 Olea europaea HOM05D003663 ORTHO05D005327 9.8e-45 184.5 230 51.3
vmacro22176 Vaccinium macrocarpon HOM05D003663 ORTHO05D005327 9.8e-45 184.5 256 49.2
COL.COLO4_06064 Corchorus olitorius HOM05D003663 ORTHO05D005327 1.3e-44 184.1 217 54.8
TPR.G17125 Trifolium pratense HOM05D003663 ORTHO05D005327 1.7e-44 183.7 249 47.8
Gohir.A11G303600 Gossypium hirsutum HOM05D003663 ORTHO05D005327 3.7e-44 182.6 231 49.8
Lj3P887T57 Lonicera japonica HOM05D003663 ORTHO05D005327 6.3e-44 181.8 204 53.4
Gohir.D11G318900 Gossypium hirsutum HOM05D003663 ORTHO05D005327 8.3e-44 181.4 237 48.9
Gorai.007G348900 Gossypium raimondii HOM05D003663 ORTHO05D005327 8.3e-44 181.4 165 60.0
DCAR_010543 Daucus carota HOM05D003663 ORTHO05D005327 2.4e-43 179.9 224 46.9
Aqoxy3G02161 Aquilegia oxysepala HOM05D003663 ORTHO05D005327 4.1e-43 179.1 180 56.7
Cpa.g.sc504.5 Carica papaya HOM05D003663 ORTHO05D005327 1.2e-42 177.6 240 48.8
Ah.13g072750 Amaranthus hybridus HOM05D003663 ORTHO05D005327 4.5e-42 175.6 222 52.3
EL10Ac3g05074 Beta vulgaris HOM05D003663 ORTHO05D005327 7.7e-42 174.9 180 54.4
Oeu060390.1 Olea europaea HOM05D002083 ORTHO05D000332 7.7e-42 174.9 207 51.2
Duzib128G0448 Durio zibethinus HOM05D003663 ORTHO05D005327 2.9e-41 172.9 201 52.2
Peaxi162Scf00815g00311 Petunia axillaris HOM05D003663 ORTHO05D005327 5.0e-41 172.2 206 50.0
Sc13g0010870 Simmondsia chinensis HOM05D003663 ORTHO05D005327 5.0e-41 172.2 218 52.8
AUR62002065 Chenopodium quinoa HOM05D003663 ORTHO05D005327 8.6e-41 171.4 245 49.4
CAN.G65.131 Capsicum annuum HOM05D003663 ORTHO05D005327 2.8e-39 166.4 223 46.6
Ciclev10021912m.g Citrus clementina HOM05D003663 ORTHO05D005327 2.8e-39 166.4 246 48.0
Nitab4.5_0001762g0070 Nicotiana tabacum HOM05D003663 ORTHO05D005327 2.8e-39 166.4 248 45.6
Migut.F00942 Erythranthe guttata HOM05D003663 ORTHO05D005327 1.8e-38 163.7 194 49.5
PSO782G5365 Papaver somniferum HOM05D003663 ORTHO05D005327 6.8e-38 161.8 215 48.4
BcaC03g18525 Brassica carinata HOM05D003663 ORTHO05D005327 3.4e-37 159.5 169 56.2
C02p08670 Brassica napus HOM05D003663 ORTHO05D005327 3.4e-37 159.5 169 56.2
BolC2t06783H Brassica oleracea HOM05D003663 ORTHO05D005327 3.4e-37 159.5 201 51.2
Sopen06g029160 Solanum pennellii HOM05D003663 ORTHO05D005327 3.4e-37 159.5 171 50.3
A02p03870 Brassica napus HOM05D003663 ORTHO05D005327 4.4e-37 159.1 169 56.2
SalBow2G0094 Salvia bowleyana HOM05D003663 ORTHO05D005327 4.4e-37 159.1 209 46.9
SGA_v2.0_scaffold50G18444 Striga asiatica HOM05D003663 ORTHO05D005327 4.4e-37 159.1 187 51.3
HanXRQChr14g0462981 Helianthus annuus HOM05D003663 ORTHO05D005327 7.5e-37 158.3 181 49.2
PSO063G6858 Papaver somniferum HOM05D003663 ORTHO05D005327 9.8e-37 157.9 215 47.4
BcaNung00434 Brassica carinata HOM05D003663 ORTHO05D005327 1.3e-36 157.5 169 56.2
PGR142G2930 Punica granatum HOM05D003663 ORTHO05D005327 1.3e-36 157.5 241 44.8
CARHR196240 Cardamine hirsuta HOM05D003663 ORTHO05D005327 2.2e-36 156.8 247 44.9
BraA02t05351Z Brassica rapa HOM05D003663 ORTHO05D005327 2.8e-36 156.4 169 56.2
Nitab4.5_0000021g0580 Nicotiana tabacum HOM05D003663 ORTHO05D005327 3.7e-36 156.0 234 44.9
Rhsim03G0221600 Rhododendron simsii HOM05D003663 ORTHO05D005327 8.3e-36 154.8 204 47.5
Eucgr.K00086 Eucalyptus grandis HOM05D003663 ORTHO05D005327 1.1e-35 154.5 225 44.0
PGSC0003DMG400027034 Solanum tuberosum HOM05D003663 ORTHO05D005327 2.4e-35 153.3 218 45.0
Thecc.05G213800 Theobroma cacao HOM05D003663 ORTHO05D005327 4.1e-35 152.5 234 47.9
Carub.0006s1513 Capsella rubella HOM05D003663 ORTHO05D005327 7.0e-35 151.8 180 51.1
Sp6g27190 Schrenkiella parvula HOM05D003663 ORTHO05D005327 9.2e-35 151.4 255 42.7
Lsat_1_v5_gn_2_136720 Lactuca sativa HOM05D003663 ORTHO05D005327 1.6e-34 150.6 194 49.0
AT5G16920 Arabidopsis thaliana HOM05D003663 ORTHO05D005327 5.9e-34 148.7 158 55.1
Thhalv10014405m.g Eutrema salsugineum HOM05D003663 ORTHO05D005327 1.0e-33 147.9 225 47.1
THA.LOC104827213 Tarenaya hassleriana HOM05D003663 ORTHO05D005327 1.7e-33 147.1 215 47.4
ECA233G1163 Erigeron canadensis HOM05D003663 ORTHO05D005327 1.9e-32 143.7 217 40.6
Cc00_g28240 Coffea canephora HOM05D003663 ORTHO05D005327 7.3e-32 141.7 224 41.5
AL6G27920 Arabidopsis lyrata HOM05D003663 ORTHO05D005327 1.6e-31 140.6 254 42.1
Prupe.2G326500 Prunus persica HOM05D003663 ORTHO05D005327 1.0e-30 137.9 229 42.8
Actinidia33794 Actinidia chinensis HOM05D003663 ORTHO05D005327 1.3e-28 131.0 184 45.7
Os12g0233900 Oryza sativa ssp. japonica HOM05D003663 ORTHO05D005327 1.6e-26 124.0 250 36.8
Aqoxy3G02718 Aquilegia oxysepala HOM05D003663 ORTHO05D005327 3.9e-25 119.4 178 39.9
arahy.Tifrunner.gnm1.ann1.5NF29Y Arachis hypogaea HOM05D003663 ORTHO05D005327 1.5e-24 117.5 153 40.5
Lalb_Chr16g0386341 Lupinus albus HOM05D003663 ORTHO05D005327 1.5e-24 117.5 93 63.4
arahy.Tifrunner.gnm1.ann1.CR9YGF Arachis hypogaea HOM05D003663 ORTHO05D005327 3.3e-24 116.3 149 40.3
ATR0829G139 Amborella trichopoda HOM05D003663 ORTHO05D005327 1.2e-23 114.4 226 38.1
Prupe.4G006800 Prunus persica HOM05D003663 ORTHO05D005327 2.8e-23 113.2 128 41.4
Psat1g178200 Pisum sativum HOM05D003663 ORTHO05D005327 8.0e-23 111.7 140 39.3
Nn1g03229 Nelumbo nucifera HOM05D003663 ORTHO05D005327 1.1e-22 111.3 149 40.3
A09p05770 Brassica napus HOM05D003663 ORTHO05D005327 3.1e-22 109.8 152 37.5
BraA09t36218Z Brassica rapa HOM05D003663 ORTHO05D005327 3.1e-22 109.8 152 37.5
TAR627G0054 Trochodendron aralioides HOM05D003663 ORTHO05D005327 4.0e-22 109.4 150 40.0
TPR.G10569 Trifolium pratense HOM05D003663 ORTHO05D005327 5.2e-22 109.0 139 38.8
C09p06370 Brassica napus HOM05D003663 ORTHO05D005327 6.8e-22 108.6 160 38.8
BcaB04g19727 Brassica carinata HOM05D003663 ORTHO05D005327 8.9e-22 108.2 157 36.3
Ca_00744_v3 Cicer arietinum L. HOM05D003663 ORTHO05D005327 8.9e-22 108.2 153 40.5
Glyma.14G007200 Glycine max HOM05D003663 ORTHO05D005327 8.9e-22 108.2 175 38.3
Medtr5g097370 Medicago truncatula HOM05D003663 ORTHO05D005327 8.9e-22 108.2 188 38.3
Nn1g01862 Nelumbo nucifera HOM05D003663 ORTHO05D005327 1.2e-21 107.8 123 51.2
BolC9t53556H Brassica oleracea HOM05D003663 ORTHO05D005327 1.5e-21 107.5 157 36.3
BcaC04g23626 Brassica carinata HOM05D003663 ORTHO05D005327 2.6e-21 106.7 160 38.1
Psat2g004440 Pisum sativum HOM05D003663 ORTHO05D005327 2.6e-21 106.7 190 38.9
Lalb_Chr20g0119391 Lupinus albus HOM05D003663 ORTHO05D005327 3.4e-21 106.3 154 37.0
VMungo0540G0424 Vigna mungo HOM05D003663 ORTHO05D005327 4.4e-21 105.9 159 37.7
Hma1.2p1_1267F.1_g271530 Hydrangea macrophylla HOM05D003663 ORTHO05D005327 1.3e-20 104.4 184 35.3
TPR.G1287 Trifolium pratense HOM05D003663 ORTHO05D005327 1.7e-20 104.0 169 36.7
Glyma.09G012100 Glycine max HOM05D003663 ORTHO05D005327 2.9e-20 103.2 154 37.0
Lj6g0026147 Lotus japonicus HOM05D003663 ORTHO05D005327 2.9e-20 103.2 128 39.1
VMungo0647G1338 Vigna mungo HOM05D003663 ORTHO05D005327 2.9e-20 103.2 183 36.1
LjContig00081g0009748 Lotus japonicus HOM05D003663 ORTHO05D005327 4.9e-20 102.4 193 35.2
Phvul.008G285700 Phaseolus vulgaris HOM05D003663 ORTHO05D005327 4.9e-20 102.4 167 38.3
FvH4_3g00560 Fragaria vesca HOM05D003663 ORTHO05D005327 6.4e-20 102.1 156 33.3
TWI38G0283 Tripterygium wilfordii HOM05D003663 ORTHO05D005327 6.4e-20 102.1 132 37.1
Aqoxy1G04227 Aquilegia oxysepala HOM05D003663 ORTHO05D005327 8.3e-20 101.7 156 38.5
MELO3C024107.2 Cucumis melo HOM05D003663 ORTHO05D005327 1.1e-19 101.3 166 35.5
Thhalv10005288m.g Eutrema salsugineum HOM05D003663 ORTHO05D005327 1.4e-19 100.9 140 37.9
Phvul.006G141400 Phaseolus vulgaris HOM05D003663 ORTHO05D005327 1.9e-19 100.5 158 35.4
Aqoxy1G04228 Aquilegia oxysepala HOM05D003663 ORTHO05D005327 2.4e-19 100.1 130 38.5
Ca_06459_v3 Cicer arietinum L. HOM05D003663 ORTHO05D005327 2.4e-19 100.1 192 37.5
Lalb_Chr17g0349111 Lupinus albus HOM05D003663 ORTHO05D005327 2.4e-19 100.1 151 37.7
Sed0003500 Sechium edule HOM05D003663 ORTHO05D005327 2.4e-19 100.1 126 40.5
CsaV3_7G023690 Cucumis sativus L. HOM05D003663 ORTHO05D005327 3.2e-19 99.8 126 39.7
Hma1.2p1_2614F.1_g325410 Hydrangea macrophylla HOM05D003663 ORTHO05D005327 3.2e-19 99.8 188 36.2
Eucgr.L03441 Eucalyptus grandis HOM05D003663 ORTHO05D005327 7.0e-19 98.6 117 39.3
FAN25G1738 Fragaria x ananassa HOM05D003663 ORTHO05D005327 7.0e-19 98.6 156 33.3
Aqoxy1G04229 Aquilegia oxysepala HOM05D003663 ORTHO05D005327 1.6e-18 97.4 168 33.3
A06p36830 Brassica napus HOM05D003663 ORTHO05D005327 2.1e-18 97.1 154 39.0
BraA06t26609Z Brassica rapa HOM05D003663 ORTHO05D005327 2.1e-18 97.1 154 39.0
ClCG02G002710 Citrullus lanatus HOM05D003663 ORTHO05D005327 2.1e-18 97.1 144 37.5
arahy.Tifrunner.gnm1.ann1.8QBK2E Arachis hypogaea HOM05D003663 ORTHO05D005327 2.7e-18 96.7 182 33.5
arahy.Tifrunner.gnm1.ann1.P7DY53 Arachis hypogaea HOM05D003663 ORTHO05D005327 2.7e-18 96.7 182 33.5
C07p41660 Brassica napus HOM05D003663 ORTHO05D005327 2.7e-18 96.7 154 39.0
BolC7t44701H Brassica oleracea HOM05D003663 ORTHO05D005327 2.7e-18 96.7 154 39.0
BcaNung02825 Brassica carinata HOM05D003663 ORTHO05D005327 4.6e-18 95.9 154 39.0
BcaNung03959 Brassica carinata HOM05D003663 ORTHO05D005327 7.8e-18 95.1 154 38.3
MELO3C028604.2 Cucumis melo HOM05D003663 ORTHO05D005327 1.3e-17 94.4 144 36.8
ATR0624G116 Amborella trichopoda HOM05D003663 ORTHO05D005327 1.7e-17 94.0 191 34.0
ClCG01G010650 Citrullus lanatus HOM05D003663 ORTHO05D005327 1.7e-17 94.0 121 37.2
Potri.006G016700 Populus trichocarpa HOM05D003663 ORTHO05D005327 2.3e-17 93.6 106 39.6
THA.LOC104826655 Tarenaya hassleriana HOM05D003663 ORTHO05D005327 2.3e-17 93.6 148 37.2
Sed0002316 Sechium edule HOM05D003663 ORTHO05D005327 1.1e-16 91.3 121 37.2
MD09G1122000 Malus domestica HOM05D003663 ORTHO05D005327 1.5e-16 90.9 145 36.6
PGR142G2458 Punica granatum HOM05D003663 ORTHO05D005327 1.5e-16 90.9 127 37.8
Sed0016160 Sechium edule HOM05D003663 ORTHO05D005327 5.6e-16 89.0 123 39.8
Sed0020467 Sechium edule HOM05D003663 ORTHO05D005327 5.6e-16 89.0 121 35.5
Sp2g21370 Schrenkiella parvula HOM05D003663 ORTHO05D005327 9.5e-16 88.2 125 36.8
CARHR186960 Cardamine hirsuta HOM05D003663 ORTHO05D005327 1.2e-15 87.8 135 36.3
AL6G38450 Arabidopsis lyrata HOM05D003663 ORTHO05D005327 2.1e-15 87.0 151 31.8
AT5G26730 Arabidopsis thaliana HOM05D003663 ORTHO05D005327 2.1e-15 87.0 134 33.6
TWI36G0551 Tripterygium wilfordii HOM05D003663 ORTHO05D005327 2.1e-15 87.0 208 32.7
Actinidia34308 Actinidia chinensis HOM05D003663 ORTHO05D005327 8.1e-15 85.1 78 59.0
Carub.0006s2423 Capsella rubella HOM05D003663 ORTHO05D005327 5.2e-14 82.4 152 32.9
PSO210G1796 Papaver somniferum HOM05D003663 ORTHO05D005327 5.2e-14 82.4 168 31.5
PSO302G0013 Papaver somniferum HOM05D003663 ORTHO05D005327 5.2e-14 82.4 168 32.1
Ciclev10017620m.g Citrus clementina HOM05D003663 ORTHO05D005327 8.9e-14 81.6 131 36.6
Actinidia08745 Actinidia chinensis HOM05D000074 ORTHO05D006801 2.6e-13 80.1 85 56.5
BcaB04g19726 Brassica carinata HOM05D003663 ORTHO05D005327 1.1e-11 74.7 156 28.2
CsaV3_7G002660 Cucumis sativus L. HOM05D003663 ORTHO05D005327 1.1e-11 74.7 115 38.3
BcaB07g29963 Brassica carinata HOM05D003663 ORTHO05D005327 9.2e-11 71.6 90 38.9
Medtr2g026520 Medicago truncatula HOM05D003663 ORTHO05D005327 1.2e-10 71.2 117 34.2
Potri.016G009000 Populus trichocarpa HOM05D003663 ORTHO05D005327 2.7e-10 70.1 60 50.0
Prupe.3G201600 Prunus persica HOM05D003663 ORTHO05D005327 3.5e-10 69.7 138 31.2
Mapoly0095s0061 Marchantia polymorpha HOM05D005423 ORTHO05D006223 4.6e-10 69.3 188 31.9
A02p39370 Brassica napus HOM05D003663 ORTHO05D010021 1.0e-09 68.2 153 26.8
RcHm_v2.0_Chr2g0156681 Rosa chinensis HOM05D003663 ORTHO05D005327 5.1e-09 65.9 115 32.2


User provided reference genes

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