Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_00401 Corylus avellana HOM05D009378 ORTHO05D010101 5.2e-66 254.2 127 100.0
Haze_00427 Corylus avellana HOM05D000125 ORTHO05D010101 6.9e-34 147.5 107 70.1
Haze_00406 Corylus avellana HOM05D000125 ORTHO05D010101 1.3e-32 143.3 107 67.3
Haze_00511 Corylus avellana HOM05D009378 ORTHO05D010101 4.9e-32 141.4 108 70.4
QL09p024149 Quercus lobata HOM05D009378 ORTHO05D010101 1.9e-23 112.8 106 57.5
QL93p0209_0042 Quercus lobata HOM05D009378 ORTHO05D010101 1.9e-23 112.8 106 57.5
CiPaw.06G031800 Carya illinoinensis HOM05D000125 ORTHO05D010101 5.5e-23 111.3 111 56.8
QL05p062837 Quercus lobata HOM05D009378 ORTHO05D010101 5.5e-23 111.3 117 52.1
QL93p0209_0016 Quercus lobata HOM05D009378 ORTHO05D010101 2.1e-22 109.4 106 53.8
QL09p024175 Quercus lobata HOM05D009378 ORTHO05D010101 2.7e-22 109.0 110 52.7
Cfa016027 Carpinus fangiana HOM05D009378 ORTHO05D010101 6.7e-21 104.4 105 53.3
QL09p024027 Quercus lobata HOM05D009378 ORTHO05D010101 6.7e-21 104.4 120 51.7
Haze_00404 Corylus avellana HOM05D000125 ORTHO05D010101 8.7e-21 104.0 108 52.8
Haze_13413 Corylus avellana HOM05D000125 ORTHO05D010101 9.7e-20 100.5 113 54.0
QL09p024439 Quercus lobata HOM05D009378 ORTHO05D010101 4.8e-19 98.2 103 53.4
Cfa016029 Carpinus fangiana HOM05D009378 ORTHO05D010101 1.1e-18 97.1 106 51.9
QL09p024465 Quercus lobata HOM05D000125 ORTHO05D010101 1.8e-18 96.3 103 53.4
Haze_14777 Corylus avellana HOM05D000125 ORTHO05D010101 2.4e-18 95.9 110 51.8
QL09p024013 Quercus lobata HOM05D008014 ORTHO05D010101 1.2e-17 93.6 117 50.4
Cfa007320 Carpinus fangiana HOM05D000125 ORTHO05D010101 2.9e-16 89.0 109 50.5
Cfa016030 Carpinus fangiana HOM05D000125 ORTHO05D010101 2.9e-16 89.0 105 48.6
QL02p073603 Quercus lobata HOM05D000125 ORTHO05D010101 9.4e-15 84.0 112 45.5
QL09p028133 Quercus lobata HOM05D009378 ORTHO05D010101 3.9e-13 78.6 122 41.0
Cfa013571 Carpinus fangiana HOM05D000125 ORTHO05D010101 8.8e-13 77.4 120 40.8
Cfa016031 Carpinus fangiana HOM05D000125 ORTHO05D010101 4.3e-12 75.1 102 44.1
Haze_19953 Corylus avellana HOM05D009378 ORTHO05D010101 8.2e-11 70.9 116 39.7
CSS0030731 Camellia sinensis var. sinensis HOM05D009378 ORTHO05D010101 1.8e-10 69.7 129 38.8
QL04p029580 Quercus lobata HOM05D000125 ORTHO05D000120 2.4e-10 69.3 114 38.6
QL04p029877 Quercus lobata HOM05D020596 ORTHO05D010101 2.4e-10 69.3 114 38.6
PGR031G1316 Punica granatum HOM05D000125 ORTHO05D010101 1.7e-08 63.2 107 33.6
Cfa016894 Carpinus fangiana HOM05D000125 ORTHO05D010101 2.2e-08 62.8 120 38.3
CSS0022186 Camellia sinensis var. sinensis HOM05D009378 ORTHO05D010101 5.0e-08 61.6 49 61.2
CSS0032415 Camellia sinensis var. sinensis HOM05D009378 ORTHO05D010101 5.0e-08 61.6 49 61.2
QL05p044270 Quercus lobata HOM05D000125 ORTHO05D007874 6.5e-08 61.2 95 35.8
CANSAT21G1400 Cannabis sativa HOM05D000125 ORTHO05D010101 8.5e-08 60.8 138 33.3
QL04p029779 Quercus lobata HOM05D020596 ORTHO05D010101 2.5e-07 59.3 95 40.0
CSS0003795 Camellia sinensis var. sinensis HOM05D000125 ORTHO05D010101 5.5e-07 58.2 81 42.0
CSS0027146 Camellia sinensis var. sinensis HOM05D009378 ORTHO05D010101 9.4e-07 57.4 49 59.2
CSS0010878 Camellia sinensis var. sinensis HOM05D009378 ORTHO05D010101 1.6e-06 56.6 49 53.1
Sed0024411 Sechium edule HOM05D024292 ORTHO05D010101 3.6e-06 55.5 107 29.0
CSS0003791 Camellia sinensis var. sinensis HOM05D009378 ORTHO05D010101 4.7e-06 55.1 48 58.3
PGR102G3309 Punica granatum HOM05D000125 ORTHO05D010101 4.7e-06 55.1 96 32.3
Cpa.g.sc623.3 Carica papaya HOM05D009378 ORTHO05D010101 7.9e-06 54.3 109 32.1


User provided reference genes

Program Settings