Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_00375 Corylus avellana HOM05D001093 ORTHO05D000743 3.4e-254 881.3 495 100.0
Cfa016073 Carpinus fangiana HOM05D001093 ORTHO05D000743 1.3e-232 809.7 499 88.4
QL09p020804 Quercus lobata HOM05D001093 ORTHO05D000743 3.3e-156 555.8 500 64.4
CiPaw.06G036000 Carya illinoinensis HOM05D001093 ORTHO05D000743 2.5e-148 529.6 499 61.9
CiPaw.05G213100 Carya illinoinensis HOM05D001093 ORTHO05D000743 3.6e-131 472.6 498 59.2
Potri.013G077900 Populus trichocarpa HOM05D001093 ORTHO05D000743 6.5e-88 328.9 501 46.3
Thecc.05G222300 Theobroma cacao HOM05D001093 ORTHO05D000743 3.3e-84 316.6 500 42.8
Dinv17244 Davidia involucrata HOM05D001093 ORTHO05D000743 4.4e-84 316.2 521 43.4
Atru.chr12.1956 Acer truncatum HOM05D001093 ORTHO05D000743 4.8e-83 312.8 533 40.2
TWI34G1570 Tripterygium wilfordii HOM05D001093 ORTHO05D000743 2.0e-76 290.8 509 37.9
Sabra13G0067000 Salix brachista HOM05D001093 ORTHO05D000743 1.4e-74 284.6 496 41.5
TWI32G0083 Tripterygium wilfordii HOM05D001093 ORTHO05D000743 2.4e-74 283.9 514 36.8
MD01G1238900 Malus domestica HOM05D001093 ORTHO05D000743 4.1e-74 283.1 526 40.7
Dinv29127 Davidia involucrata HOM05D001093 ORTHO05D000743 7.7e-73 278.9 506 41.3
MD07G1310800 Malus domestica HOM05D001093 ORTHO05D000743 1.0e-72 278.5 520 39.8
GSVIVG01024330001 Vitis vinifera HOM05D001093 ORTHO05D000743 1.3e-72 278.1 510 37.6
Sabra19G0052200 Salix brachista HOM05D001093 ORTHO05D000743 6.5e-72 275.8 502 42.8
Potri.019G041900 Populus trichocarpa HOM05D001093 ORTHO05D000743 3.6e-70 270.0 446 42.4
Duzib106G0988 Durio zibethinus HOM05D001093 ORTHO05D000743 4.7e-70 269.6 500 38.6
Manes.09G129500 Manihot esculenta HOM05D001093 ORTHO05D000743 4.7e-70 269.6 510 39.8
TAR629G2884 Trochodendron aralioides HOM05D001093 ORTHO05D000743 4.7e-70 269.6 533 37.5
COL.COLO4_15143 Corchorus olitorius HOM05D001093 ORTHO05D000743 8.0e-70 268.9 502 41.2
TAR636G0996 Trochodendron aralioides HOM05D001093 ORTHO05D000743 2.3e-69 267.3 568 35.0
Gohir.D11G318200 Gossypium hirsutum HOM05D001093 ORTHO05D000743 3.0e-69 266.9 499 38.3
Gorai.007G348200 Gossypium raimondii HOM05D001093 ORTHO05D000743 3.0e-69 266.9 499 38.3
Duzib177G0861 Durio zibethinus HOM05D001093 ORTHO05D000743 4.0e-69 266.5 499 39.7
Duzib128G0989 Durio zibethinus HOM05D001093 ORTHO05D000743 1.2e-68 265.0 500 39.8
Gohir.A11G302900 Gossypium hirsutum HOM05D001093 ORTHO05D000743 7.5e-68 262.3 499 37.9
Glyma.11G109800 Glycine max HOM05D001093 ORTHO05D000743 9.8e-68 261.9 503 35.8
Cpa.g.sc43.128 Carica papaya HOM05D001093 ORTHO05D000743 1.3e-67 261.5 499 41.7
Glyma.12G014900 Glycine max HOM05D001093 ORTHO05D000743 2.3e-64 250.8 504 34.3
arahy.Tifrunner.gnm1.ann1.GC8QG2 Arachis hypogaea HOM05D001093 ORTHO05D000743 5.7e-60 236.1 515 32.4
RcHm_v2.0_Chr1g0384581 Rosa chinensis HOM05D001093 ORTHO05D000743 8.3e-59 232.3 503 39.2
TPR.G9837 Trifolium pratense HOM05D001093 ORTHO05D000743 7.0e-58 229.2 507 33.5
Hma1.2p1_0649F.1_g195160 Hydrangea macrophylla HOM05D001093 ORTHO05D000743 1.6e-57 228.0 528 36.2
Ca_26496_v3 Cicer arietinum L. HOM05D001093 ORTHO05D000743 3.5e-57 226.9 501 34.7
Gohir.A02G111700 Gossypium hirsutum HOM05D001093 ORTHO05D000743 4.5e-57 226.5 499 34.1
Medtr0001s0570 Medicago truncatula HOM05D001093 ORTHO05D000743 5.9e-57 226.1 506 34.6
arahy.Tifrunner.gnm1.ann1.F9MJGS Arachis hypogaea HOM05D001093 ORTHO05D000743 7.8e-57 225.7 512 32.2
TAR375G0600 Trochodendron aralioides HOM05D001093 ORTHO05D000743 1.0e-56 225.3 530 35.5
Gohir.D03G054500 Gossypium hirsutum HOM05D001093 ORTHO05D000743 1.3e-56 224.9 499 34.7
arahy.Tifrunner.gnm1.ann1.A42YA2 Arachis hypogaea HOM05D001093 ORTHO05D000743 4.3e-55 219.9 515 31.8
CANSAT21G1840 Cannabis sativa HOM05D001093 ORTHO05D000743 9.5e-55 218.8 539 39.0
Gorai.003G057400 Gossypium raimondii HOM05D001093 ORTHO05D000743 1.6e-54 218.0 499 34.3
arahy.Tifrunner.gnm1.ann1.BD8AAL Arachis hypogaea HOM05D001093 ORTHO05D000743 6.8e-53 212.6 515 31.3
Phvul.011G017900 Phaseolus vulgaris HOM05D001093 ORTHO05D000743 4.4e-52 209.9 510 34.1
Glyma.01G234300 Glycine max HOM05D001093 ORTHO05D000743 9.8e-52 208.8 589 29.9
FvH4_7g34220 Fragaria vesca HOM05D001093 ORTHO05D000743 9.2e-50 202.2 502 36.7
FAN01G2535 Fragaria x ananassa HOM05D001093 ORTHO05D000743 9.2e-50 202.2 502 36.7
FAN03G3313 Fragaria x ananassa HOM05D001093 ORTHO05D000743 2.0e-49 201.1 502 36.9
FAN10G1498 Fragaria x ananassa HOM05D001093 ORTHO05D000743 2.3e-48 197.6 502 36.5
Glyma.11G008600 Glycine max HOM05D001093 ORTHO05D000743 4.3e-47 193.4 570 30.0
Lj3g0015044 Lotus japonicus HOM05D001093 ORTHO05D000743 4.3e-47 193.4 505 29.7
CSS0029521 Camellia sinensis var. sinensis HOM05D001093 ORTHO05D000743 1.1e-45 188.7 532 35.2
Lalb_Chr05g0211191 Lupinus albus HOM05D001093 ORTHO05D000743 2.6e-44 184.1 574 30.5
Lalb_Chr09g0320091 Lupinus albus HOM05D001093 ORTHO05D000743 5.8e-44 183.0 555 31.0
VMungo1127G0846 Vigna mungo HOM05D001093 ORTHO05D000743 2.2e-43 181.0 503 31.4
Nn6g33596 Nelumbo nucifera HOM05D001093 ORTHO05D000743 3.7e-43 180.3 535 30.3
VMungo1215G2662 Vigna mungo HOM05D001093 ORTHO05D000743 6.4e-43 179.5 593 28.2
Actinidia08764 Actinidia chinensis HOM05D001093 ORTHO05D000743 1.4e-42 178.3 523 30.4
Ca_24429_v3 Cicer arietinum L. HOM05D001093 ORTHO05D000743 1.2e-41 175.3 573 28.4
arahy.Tifrunner.gnm1.ann1.XEDZ3Q Arachis hypogaea HOM05D001093 ORTHO05D000743 2.7e-41 174.1 609 28.4
arahy.Tifrunner.gnm1.ann1.PFVK4Y Arachis hypogaea HOM05D001093 ORTHO05D000743 7.8e-41 172.6 628 28.2
CSS0045646 Camellia sinensis var. sinensis HOM05D001093 ORTHO05D000743 3.3e-39 167.2 515 32.0
LjContig00222g0003836 Lotus japonicus HOM05D001093 ORTHO05D000743 2.8e-38 164.1 587 30.0
Sed0021633 Sechium edule HOM05D001093 ORTHO05D000743 6.8e-37 159.5 519 28.1
Phvul.002G041700 Phaseolus vulgaris HOM05D001093 ORTHO05D000743 2.6e-36 157.5 569 26.7
ClCG09G017270 Citrullus lanatus HOM05D001093 ORTHO05D000743 7.5e-36 156.0 450 29.3
Eucgr.A02991 Eucalyptus grandis HOM05D001093 ORTHO05D000743 1.3e-35 155.2 618 27.5
MELO3C021898.2 Cucumis melo HOM05D001093 ORTHO05D000743 6.4e-35 152.9 455 29.5
Lalb_Chr16g0376531 Lupinus albus HOM05D001093 ORTHO05D000743 1.1e-34 152.1 568 28.2
Nn1g00516 Nelumbo nucifera HOM05D001093 ORTHO05D000743 1.4e-34 151.8 541 29.4
Lalb_Chr01g0000811 Lupinus albus HOM05D001093 ORTHO05D000743 7.1e-34 149.4 448 28.1
Psat2g189560 Pisum sativum HOM05D001093 ORTHO05D000743 3.9e-32 143.7 605 26.3
Medtr5g007180 Medicago truncatula HOM05D001093 ORTHO05D000743 1.1e-31 142.1 599 28.0
Actinidia34331 Actinidia chinensis HOM05D001093 ORTHO05D000743 4.3e-31 140.2 288 36.1
Sed0011681 Sechium edule HOM05D001093 ORTHO05D000743 1.8e-29 134.8 554 26.0
Rhsim03G0224200 Rhododendron simsii HOM05D001093 ORTHO05D000743 3.4e-28 130.6 516 30.6
TPR.G37977 Trifolium pratense HOM05D001093 ORTHO05D000743 2.9e-27 127.5 581 29.9
Sc13g0010990 Simmondsia chinensis HOM05D001093 ORTHO05D000743 2.1e-25 121.3 526 27.2
Aqoxy3G02386 Aquilegia oxysepala HOM05D001093 ORTHO05D000743 3.5e-25 120.6 500 28.2
Peaxi162Scf00516g00519 Petunia axillaris HOM05D001093 ORTHO05D000743 1.0e-24 119.0 528 29.0
Ciclev10033108m.g Citrus clementina HOM05D001093 ORTHO05D000743 1.3e-24 118.6 116 60.3
vmacro06373 Vaccinium macrocarpon HOM05D001093 ORTHO05D000743 1.5e-23 115.2 501 28.7
AUR62028209 Chenopodium quinoa HOM05D001093 ORTHO05D000743 4.3e-23 113.6 539 29.1
EL10Ac3g05045 Beta vulgaris HOM05D001093 ORTHO05D000743 9.6e-23 112.5 220 43.6
Nitab4.5_0005968g0020 Nicotiana tabacum HOM05D001093 ORTHO05D000743 8.1e-22 109.4 532 28.8
Ah.04g156190 Amaranthus hybridus HOM05D001093 ORTHO05D000743 1.1e-21 109.0 535 27.1
Sopen03g028010 Solanum pennellii HOM05D001093 ORTHO05D000743 4.0e-21 107.1 440 27.7
AUR62002091 Chenopodium quinoa HOM05D001093 ORTHO05D000743 1.5e-20 105.1 484 28.5
Nitab4.5_0000021g0840 Nicotiana tabacum HOM05D001093 ORTHO05D000743 1.5e-20 105.1 542 27.7
MBI04_g22936_MAGBIO Magnolia biondii HOM05D001093 ORTHO05D000743 2.0e-20 104.8 537 26.4
Solyc03g097260.4 Solanum lycopersicum HOM05D001093 ORTHO05D000743 2.6e-20 104.4 441 27.7
CAN.G1131.39 Capsicum annuum HOM05D001093 ORTHO05D000743 2.7e-17 94.4 310 30.0
MSTRG.4 Avicennia marina HOM05D001093 ORTHO05D000743 3.5e-17 94.0 506 27.7
PGSC0003DMG400026489 Solanum tuberosum HOM05D001093 ORTHO05D000743 3.5e-17 94.0 208 35.6
THA.LOC104803125 Tarenaya hassleriana HOM05D001093 ORTHO05D000743 2.3e-16 91.3 441 28.3
Hund22738 Selenicereus undatus HOM05D001093 ORTHO05D000743 5.1e-16 90.1 230 37.0
Aqoxy4G00137 Aquilegia oxysepala HOM05D001093 ORTHO05D000743 3.6e-14 84.0 175 35.4
DCAR_020427 Daucus carota HOM05D001093 ORTHO05D000743 4.0e-13 80.5 466 24.2
Ciclev10033462m.g Citrus clementina HOM05D001093 ORTHO05D000743 3.4e-12 77.4 107 40.2
DCAR_009027 Daucus carota HOM05D001093 ORTHO05D000743 3.4e-12 77.4 440 24.1
PSO063G0856 Papaver somniferum HOM05D001093 ORTHO05D000743 1.4e-10 72.0 207 32.4
Prupe.2G329000 Prunus persica HOM05D001093 ORTHO05D000743 2.4e-10 71.2 121 43.0
Dinv25213 Davidia involucrata HOM05D001093 ORTHO05D000743 4.2e-10 70.5 136 39.0
PSO782G4933 Papaver somniferum HOM05D001093 ORTHO05D000743 2.1e-09 68.2 269 29.7
CsaV3_2G014050 Cucumis sativus L. HOM05D001093 ORTHO05D000743 7.9e-09 66.2 121 33.9
Lj3C884G6 Lonicera japonica HOM05D001093 ORTHO05D000743 1.0e-08 65.9 116 39.7
MSTRG.8558 Avicennia marina HOM05D001093 ORTHO05D000743 2.3e-08 64.7 506 26.9
ATR0049G075 Amborella trichopoda HOM05D001093 ORTHO05D000743 3.0e-08 64.3 134 33.6
Oeu026492.1 Olea europaea HOM05D001093 ORTHO05D049457 6.7e-08 63.2 111 40.5
Oeu027893.3 Olea europaea HOM05D001093 ORTHO05D000743 2.5e-07 61.2 133 35.3
Migut.F00931 Erythranthe guttata HOM05D001093 ORTHO05D000743 5.6e-07 60.1 130 30.8


User provided reference genes

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