Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_00371 Corylus avellana HOM05D005039 ORTHO05D006145 2.7e-152 542.0 273 100.0
Cfa016075 Carpinus fangiana HOM05D005039 ORTHO05D006145 5.0e-98 361.7 239 81.2
CiPaw.05G212800 Carya illinoinensis HOM05D005039 ORTHO05D006145 5.2e-95 351.7 237 79.7
QL09p020758 Quercus lobata HOM05D005039 ORTHO05D006145 8.3e-93 344.4 239 77.8
Oeu027894.4 Olea europaea HOM05D005039 ORTHO05D006145 1.1e-92 344.0 254 73.6
Nn3g19238 Nelumbo nucifera HOM05D005039 ORTHO05D006145 1.4e-92 343.6 238 77.3
Dinv29126 Davidia involucrata HOM05D005039 ORTHO05D006145 5.3e-92 341.7 238 77.3
Atru.chr12.1876 Acer truncatum HOM05D005039 ORTHO05D006145 9.1e-92 340.9 249 73.9
CSS0008859 Camellia sinensis var. sinensis HOM05D005039 ORTHO05D006145 1.2e-91 340.5 238 77.3
Duzib106G2059 Durio zibethinus HOM05D005039 ORTHO05D006145 2.0e-91 339.7 238 74.8
TAR629G1612 Trochodendron aralioides HOM05D005039 ORTHO05D006145 3.5e-91 339.0 238 75.6
Aqoxy1G03063 Aquilegia oxysepala HOM05D005039 ORTHO05D006145 1.3e-90 337.0 237 75.5
Duzib128G1855 Durio zibethinus HOM05D005039 ORTHO05D006145 2.2e-90 336.3 238 73.9
Thecc.05G222600 Theobroma cacao HOM05D005039 ORTHO05D006145 2.2e-90 336.3 238 74.4
Manes.08G160900 Manihot esculenta HOM05D005039 ORTHO05D006145 2.9e-90 335.9 238 77.3
TWI79G0887 Tripterygium wilfordii HOM05D005039 ORTHO05D006145 5.0e-90 335.1 238 74.8
Actinidia08765 Actinidia chinensis HOM05D005039 ORTHO05D006145 6.5e-90 334.7 241 75.5
MD07G1310900 Malus domestica HOM05D005039 ORTHO05D006145 8.5e-90 334.3 238 76.5
vmacro06372 Vaccinium macrocarpon HOM05D005039 ORTHO05D006145 8.5e-90 334.3 244 75.4
Cc02_g00100 Coffea canephora HOM05D005039 ORTHO05D006145 1.9e-89 333.2 238 75.6
MELO3C021899.2 Cucumis melo HOM05D005039 ORTHO05D006145 1.9e-89 333.2 238 74.4
Nn1g02122 Nelumbo nucifera HOM05D005039 ORTHO05D006145 1.9e-89 333.2 238 75.2
Sc13g0011000 Simmondsia chinensis HOM05D005039 ORTHO05D006145 1.9e-89 333.2 238 75.2
Glyma.11G109900 Glycine max HOM05D005039 ORTHO05D006145 2.5e-89 332.8 238 74.8
Peaxi162Scf00802g00029 Petunia axillaris HOM05D005039 ORTHO05D006145 2.5e-89 332.8 249 71.9
SGA_v2.0_scaffold188G40301 Striga asiatica HOM05D005039 ORTHO05D006145 2.5e-89 332.8 238 75.6
CANSAT21G2526 Cannabis sativa HOM05D005039 ORTHO05D006145 3.2e-89 332.4 238 75.6
Rhsim03G0224300 Rhododendron simsii HOM05D005039 ORTHO05D006145 4.2e-89 332.0 247 75.7
SalBow7G2894 Salvia bowleyana HOM05D005039 ORTHO05D006145 4.2e-89 332.0 238 73.9
GSVIVG01024328001 Vitis vinifera HOM05D005039 ORTHO05D006145 4.2e-89 332.0 238 74.8
CsaV3_2G014060 Cucumis sativus L. HOM05D005039 ORTHO05D006145 5.5e-89 331.6 238 74.4
Gohir.A02G125900 Gossypium hirsutum HOM05D005039 ORTHO05D006145 7.2e-89 331.3 238 73.1
Gohir.D03G054700 Gossypium hirsutum HOM05D005039 ORTHO05D006145 7.2e-89 331.3 238 73.1
Gorai.003G057600 Gossypium raimondii HOM05D005039 ORTHO05D006145 7.2e-89 331.3 238 73.1
AUR62028211 Chenopodium quinoa HOM05D005039 ORTHO05D006145 9.4e-89 330.9 238 74.4
HanXRQChr16g0512151 Helianthus annuus HOM05D005039 ORTHO05D006145 9.4e-89 330.9 238 73.9
Glyma.12G014800 Glycine max HOM05D005039 ORTHO05D006145 1.2e-88 330.5 238 74.4
Lj3g0003232 Lotus japonicus HOM05D005039 ORTHO05D006145 1.2e-88 330.5 238 74.8
Nitab4.5_0009864g0010 Nicotiana tabacum HOM05D005039 ORTHO05D006145 1.6e-88 330.1 238 73.9
AUR62002093 Chenopodium quinoa HOM05D005039 ORTHO05D006145 2.1e-88 329.7 238 73.9
Sed0001134 Sechium edule HOM05D005039 ORTHO05D006145 2.1e-88 329.7 238 73.5
MBI04_g12218_MAGBIO Magnolia biondii HOM05D005039 ORTHO05D006145 2.7e-88 329.3 238 73.9
Sopen07g023860 Solanum pennellii HOM05D005039 ORTHO05D006145 2.7e-88 329.3 249 71.5
Solyc07g045330.3 Solanum lycopersicum HOM05D005039 ORTHO05D006145 3.6e-88 328.9 249 71.5
ATR0829G179 Amborella trichopoda HOM05D005039 ORTHO05D006145 6.1e-88 328.2 238 74.8
MSTRG.24939 Avicennia marina HOM05D005039 ORTHO05D006145 6.1e-88 328.2 238 73.9
EL10Ac3g05043 Beta vulgaris HOM05D005039 ORTHO05D006145 6.1e-88 328.2 238 74.4
Ciclev10031435m.g Citrus clementina HOM05D005039 ORTHO05D006145 6.1e-88 328.2 238 74.8
Nitab4.5_0006992g0040 Nicotiana tabacum HOM05D005039 ORTHO05D006145 6.1e-88 328.2 251 72.1
FvH4_7g34230 Fragaria vesca HOM05D005039 ORTHO05D006145 1.4e-87 327.0 249 71.1
FAN01G1789 Fragaria x ananassa HOM05D005039 ORTHO05D006145 1.4e-87 327.0 249 71.1
Phvul.011G017800 Phaseolus vulgaris HOM05D005039 ORTHO05D006145 1.4e-87 327.0 238 73.9
CAN.G437.12 Capsicum annuum HOM05D005039 ORTHO05D006145 1.8e-87 326.6 249 71.1
FAN10G2688 Fragaria x ananassa HOM05D005039 ORTHO05D006145 1.8e-87 326.6 249 71.1
Potri.013G077700 Populus trichocarpa HOM05D005039 ORTHO05D006145 2.3e-87 326.2 239 72.8
Migut.C00159 Erythranthe guttata HOM05D005039 ORTHO05D006145 3.0e-87 325.9 238 73.9
PSO782G0889 Papaver somniferum HOM05D005039 ORTHO05D006145 5.2e-87 325.1 238 74.4
PGR142G1194 Punica granatum HOM05D005039 ORTHO05D006145 6.8e-87 324.7 238 72.3
RcHm_v2.0_Chr1g0384591 Rosa chinensis HOM05D005039 ORTHO05D006145 6.8e-87 324.7 238 74.4
Sabra13G0066500 Salix brachista HOM05D005039 ORTHO05D006145 6.8e-87 324.7 239 72.8
arahy.Tifrunner.gnm1.ann1.GG16T8 Arachis hypogaea HOM05D005039 ORTHO05D006145 8.8e-87 324.3 249 69.9
arahy.Tifrunner.gnm1.ann1.IZT0PT Arachis hypogaea HOM05D005039 ORTHO05D006145 8.8e-87 324.3 249 69.9
THA.LOC104805716 Tarenaya hassleriana HOM05D005039 ORTHO05D006145 1.2e-86 323.9 238 72.3
VMungo1127G0275 Vigna mungo HOM05D005039 ORTHO05D006145 2.6e-86 322.8 238 72.7
Hund09811 Selenicereus undatus HOM05D005039 ORTHO05D006145 7.5e-86 321.2 253 70.8
Lsat_1_v5_gn_9_47921 Lactuca sativa HOM05D005039 ORTHO05D006145 9.8e-86 320.9 249 70.3
PSO063G4466 Papaver somniferum HOM05D005039 ORTHO05D006145 9.8e-86 320.9 238 73.5
Medtr5g005440 Medicago truncatula HOM05D005039 ORTHO05D006145 1.3e-85 320.5 238 73.1
Ca_26497_v3 Cicer arietinum L. HOM05D005039 ORTHO05D006145 1.7e-85 320.1 238 72.7
MD01G1239200 Malus domestica HOM05D005039 ORTHO05D006145 2.8e-85 319.3 265 68.7
FAN03G0337 Fragaria x ananassa HOM05D005039 ORTHO05D006145 8.3e-85 317.8 240 72.5
AL2G19600 Arabidopsis lyrata HOM05D005039 ORTHO05D006145 1.1e-84 317.4 238 70.2
Ah.13g072370 Amaranthus hybridus HOM05D005039 ORTHO05D006145 1.8e-84 316.6 238 73.9
Carub.0002s1015 Capsella rubella HOM05D005039 ORTHO05D006145 4.1e-84 315.5 238 70.2
Sp7g25580 Schrenkiella parvula HOM05D005039 ORTHO05D006145 5.4e-84 315.1 238 70.6
Carub.0007s1322 Capsella rubella HOM05D005039 ORTHO05D006145 7.0e-84 314.7 238 71.0
Thhalv10025115m.g Eutrema salsugineum HOM05D005039 ORTHO05D006145 7.0e-84 314.7 238 69.7
Aa31LG2G2190 Aethionema arabicum HOM05D005039 ORTHO05D006145 1.2e-83 313.9 249 67.5
Lalb_Chr09g0320081 Lupinus albus HOM05D005039 ORTHO05D006145 1.6e-83 313.5 238 69.3
AT1G64990 Arabidopsis thaliana HOM05D005039 ORTHO05D006145 2.7e-83 312.8 238 69.7
CARHR235330 Cardamine hirsuta HOM05D005039 ORTHO05D006145 3.5e-83 312.4 238 68.9
CARHR056390 Cardamine hirsuta HOM05D005039 ORTHO05D006145 1.7e-82 310.1 238 69.3
BcaNung01651 Brassica carinata HOM05D005039 ORTHO05D006145 3.8e-82 308.9 238 68.9
BcaC09g50566 Brassica carinata HOM05D005039 ORTHO05D006145 5.0e-82 308.5 238 68.5
A01p18920 Brassica napus HOM05D005039 ORTHO05D006145 5.0e-82 308.5 238 68.5
C01p23870 Brassica napus HOM05D005039 ORTHO05D006145 5.0e-82 308.5 238 68.5
BolC1t02332H Brassica oleracea HOM05D005039 ORTHO05D006145 5.0e-82 308.5 238 68.5
BraA01t01833Z Brassica rapa HOM05D005039 ORTHO05D006145 5.0e-82 308.5 238 68.5
ECA232G0266 Erigeron canadensis HOM05D005039 ORTHO05D006145 6.6e-82 308.1 243 69.1
AT4G27630 Arabidopsis thaliana HOM05D005039 ORTHO05D006145 1.1e-81 307.4 238 69.3
Sp5g19320 Schrenkiella parvula HOM05D005039 ORTHO05D006145 2.5e-81 306.2 238 68.5
C02p21070 Brassica napus HOM05D005039 ORTHO05D006145 4.2e-81 305.4 238 68.5
BolC2t08248H Brassica oleracea HOM05D005039 ORTHO05D006145 4.2e-81 305.4 238 68.5
BraA02t06350Z Brassica rapa HOM05D005039 ORTHO05D006145 4.2e-81 305.4 238 68.5
Zm00001eb430290 Zea mays HOM05D005039 ORTHO05D006145 4.2e-81 305.4 238 69.3
CSS0032758 Camellia sinensis var. sinensis HOM05D005039 ORTHO05D006145 7.2e-81 304.7 238 71.4
BcaB05g25317 Brassica carinata HOM05D005039 ORTHO05D006145 1.6e-80 303.5 238 68.1
HPP92_014410 Vanilla planifolia HOM05D005039 ORTHO05D006145 3.6e-80 302.4 222 71.2
Os04g0600800 Oryza sativa ssp. japonica HOM05D005039 ORTHO05D006145 1.4e-79 300.4 238 68.5
A02p12960 Brassica napus HOM05D005039 ORTHO05D006145 2.3e-79 299.7 239 67.8
Eucgr.K00067 Eucalyptus grandis HOM05D005039 ORTHO05D006145 2.5e-73 279.6 222 70.7
PGSC0003DMG402017405 Solanum tuberosum HOM05D005039 ORTHO05D006145 1.1e-65 254.2 195 69.7
Mapoly0094s0006 Marchantia polymorpha HOM05D005039 ORTHO05D006145 4.3e-65 252.3 238 57.6
unitig_0.g2070 Utricularia gibba HOM05D005039 ORTHO05D006145 2.1e-64 250.0 238 61.8
SMO304G0068 Selaginella moellendorffii HOM05D005039 ORTHO05D006145 3.1e-63 246.1 225 58.2
Actinidia24520 Actinidia chinensis HOM05D005039 ORTHO05D006145 1.3e-61 240.7 186 71.0
CBR_g72647 Chara braunii HOM05D005039 ORTHO05D006145 8.6e-58 228.0 236 51.3
DCAR_020429 Daucus carota HOM05D005039 ORTHO05D006145 6.2e-56 221.9 133 86.5
ClCG09G017310 Citrullus lanatus HOM05D005039 ORTHO05D006145 8.1e-56 221.5 120 93.3
AagrBONN_evm.TU.Sc2ySwM_117.727 Anthoceros agrestis HOM05D005039 ORTHO05D006145 2.0e-54 216.9 256 46.1
Psat7g155320 Pisum sativum HOM05D005039 ORTHO05D006145 7.1e-52 208.4 124 84.7
CSS0015728 Camellia sinensis var. sinensis HOM05D005039 ORTHO05D006145 7.1e-44 181.8 120 80.8
Prupe.2G329100 Prunus persica HOM05D005039 ORTHO05D006145 2.7e-43 179.9 96 95.8
Cpa.g.sc43.133 Carica papaya HOM05D005039 ORTHO05D006145 2.1e-35 153.7 85 92.9
Lj3A884T54 Lonicera japonica HOM05D005039 ORTHO05D006145 8.1e-32 141.7 80 92.5
Cre16.g674739 Chlamydomonas reinhardtii HOM05D005039 ORTHO05D006145 4.0e-31 139.4 225 37.8
Cpa.g.sc43.136 Carica papaya HOM05D005039 ORTHO05D006145 9.0e-31 138.3 72 91.7
Carub.0008s0531 Capsella rubella HOM05D005039 ORTHO05D006145 1.7e-29 134.0 81 85.2
ClCG09G017320 Citrullus lanatus HOM05D005039 ORTHO05D006145 8.4e-29 131.7 72 86.1
COL.COLO4_15138 Corchorus olitorius HOM05D005039 ORTHO05D006145 1.1e-28 131.3 72 86.1
CDE11G0023 Ceratophyllum demersum HOM05D005039 ORTHO05D006145 7.1e-28 128.6 72 81.9
SEGI_13634 Sequoiadendron giganteum HOM05D005039 ORTHO05D006145 1.6e-27 127.5 72 83.3
CSS0031224 Camellia sinensis var. sinensis HOM05D005039 ORTHO05D006145 1.1e-25 121.3 72 83.3
Actinidia34332 Actinidia chinensis HOM05D005039 ORTHO05D006145 2.5e-25 120.2 65 92.3
SHI14975 Sapria himalayana HOM05D000023 ORTHO05D000014 2.1e-24 117.1 71 81.7
EL10Ac3g05835 Beta vulgaris HOM05D005039 ORTHO05D006145 4.0e-23 112.8 65 89.2
COL.COLO4_15139 Corchorus olitorius HOM05D005039 ORTHO05D006145 3.4e-22 109.8 163 45.4
AagrBONN_evm.TU.Sc2ySwM_369.165 Anthoceros agrestis HOM05D005039 ORTHO05D006145 1.2e-19 101.3 85 60.0
Carub.0008s0533 Capsella rubella HOM05D005039 ORTHO05D006145 1.8e-15 87.4 52 86.5
CDE11G0732 Ceratophyllum demersum HOM05D005039 ORTHO05D006145 1.2e-14 84.7 48 89.6
MCO06G137 Micromonas commoda HOM05D005039 ORTHO05D006145 5.8e-14 82.4 82 48.8
EL10Ac7g16242 Beta vulgaris HOM05D005039 ORTHO05D006145 1.7e-13 80.9 44 93.2
PRCOL_00000150 Prasinoderma coloniale HOM05D005039 ORTHO05D006145 9.3e-12 75.1 225 29.3
GSVIVG01028619001 Vitis vinifera HOM05D005039 ORTHO05D048867 4.6e-11 72.8 58 65.5
CARHR057320 Cardamine hirsuta HOM05D005039 ORTHO05D006145 7.7e-06 55.5 34 82.4


User provided reference genes

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