Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_00351 Corylus avellana HOM05D004851 ORTHO05D006091 3.8e-266 921.0 482 100.0
Cfa016106 Carpinus fangiana HOM05D004851 ORTHO05D006091 1.2e-208 729.9 395 98.0
CiPaw.06G036900 Carya illinoinensis HOM05D004851 ORTHO05D006091 1.6e-184 649.8 395 84.8
Prupe.2G329900 Prunus persica HOM05D004851 ORTHO05D006091 1.1e-169 600.5 406 78.3
MD06G1015700 Malus domestica HOM05D004851 ORTHO05D006091 3.6e-168 595.5 395 80.0
MD14G1141700 Malus domestica HOM05D004851 ORTHO05D006091 3.6e-168 595.5 395 79.2
Sed0012488 Sechium edule HOM05D004851 ORTHO05D006091 2.4e-156 556.2 399 77.2
TWI60G1536 Tripterygium wilfordii HOM05D004851 ORTHO05D006091 3.5e-155 552.4 496 64.3
Ciclev10031158m.g Citrus clementina HOM05D004851 ORTHO05D006091 7.3e-153 544.7 440 67.7
RcHm_v2.0_Chr1g0384661 Rosa chinensis HOM05D004851 ORTHO05D006091 2.8e-152 542.7 395 75.4
Manes.08G159500 Manihot esculenta HOM05D004851 ORTHO05D006091 6.2e-152 541.6 393 73.5
CsaV3_2G035950 Cucumis sativus L. HOM05D004851 ORTHO05D006091 8.1e-152 541.2 396 73.0
MELO3C024747.2 Cucumis melo HOM05D004851 ORTHO05D006091 3.1e-151 539.3 396 74.2
Duzib106G1281 Durio zibethinus HOM05D004851 ORTHO05D006091 1.5e-150 537.0 384 74.7
ClCG02G007790 Citrullus lanatus HOM05D004851 ORTHO05D006091 3.4e-150 535.8 396 75.3
Duzib128G1329 Durio zibethinus HOM05D004851 ORTHO05D006091 4.9e-149 531.9 445 67.4
CANSAT01G3202 Cannabis sativa HOM05D004851 ORTHO05D006091 1.1e-148 530.8 401 73.6
CSS0035891 Camellia sinensis var. sinensis HOM05D004851 ORTHO05D006091 3.0e-146 522.7 394 72.6
Dinv29371 Davidia involucrata HOM05D004851 ORTHO05D006091 3.9e-146 522.3 365 76.2
TAR628G1149 Trochodendron aralioides HOM05D004851 ORTHO05D006091 2.5e-145 519.6 399 71.4
Actinidia08788 Actinidia chinensis HOM05D004851 ORTHO05D006091 5.6e-145 518.5 406 70.9
Lj3A883T54 Lonicera japonica HOM05D004851 ORTHO05D006091 5.6e-145 518.5 500 61.6
Atru.chr11.646 Acer truncatum HOM05D004851 ORTHO05D006091 8.4e-141 504.6 438 66.0
Hma1.2p1_2196F.1_g316860 Hydrangea macrophylla HOM05D004851 ORTHO05D006091 2.5e-140 503.1 334 78.4
Nitab4.5_0005243g0030 Nicotiana tabacum HOM05D004851 ORTHO05D006091 3.2e-140 502.7 442 63.8
Thecc.05G226800 Theobroma cacao HOM05D004851 ORTHO05D006091 1.8e-138 496.9 401 69.1
Nn4g24557 Nelumbo nucifera HOM05D004851 ORTHO05D006091 2.3e-138 496.5 410 69.5
Sc17g0001530 Simmondsia chinensis HOM05D004851 ORTHO05D006091 2.3e-138 496.5 398 72.9
Rhsim03G0240200 Rhododendron simsii HOM05D004851 ORTHO05D006091 8.7e-138 494.6 400 67.2
GSVIVG01020716001 Vitis vinifera HOM05D004851 ORTHO05D006091 1.1e-137 494.2 298 85.6
PGSC0003DMG402016246 Solanum tuberosum HOM05D004851 ORTHO05D006091 5.6e-137 491.9 488 59.6
Sopen11g004490 Solanum pennellii HOM05D004851 ORTHO05D006091 2.1e-136 490.0 489 59.3
Solyc11g008710.2 Solanum lycopersicum HOM05D004851 ORTHO05D006091 3.7e-136 489.2 453 62.5
FAN10G2942 Fragaria x ananassa HOM05D004851 ORTHO05D006091 1.1e-135 487.6 397 67.8
CAN.G691.8 Capsicum annuum HOM05D004851 ORTHO05D006091 5.3e-135 485.3 503 59.4
LjContig00389g0015553 Lotus japonicus HOM05D004851 ORTHO05D006091 5.3e-135 485.3 447 62.4
Ca_17637_v3 Cicer arietinum L. HOM05D004851 ORTHO05D006091 9.0e-135 484.6 452 61.1
FAN03G1643 Fragaria x ananassa HOM05D004851 ORTHO05D006091 9.0e-135 484.6 388 68.6
Eucgr.A00913 Eucalyptus grandis HOM05D004851 ORTHO05D006091 2.6e-134 483.0 362 72.7
Lj3g0009966 Lotus japonicus HOM05D004851 ORTHO05D006091 3.4e-134 482.6 445 62.2
Peaxi162Scf00254g00512 Petunia axillaris HOM05D004851 ORTHO05D006091 5.8e-134 481.9 513 56.7
Lalb_Chr01g0022101 Lupinus albus HOM05D004851 ORTHO05D006091 1.7e-133 480.3 465 59.1
FAN01G0391 Fragaria x ananassa HOM05D004851 ORTHO05D006091 2.9e-133 479.6 391 69.3
FvH4_7g34290 Fragaria vesca HOM05D004851 ORTHO05D006091 6.5e-133 478.4 391 69.1
PGR031G1011 Punica granatum HOM05D004851 ORTHO05D006091 6.5e-133 478.4 405 66.9
Sabra13G0065400 Salix brachista HOM05D004851 ORTHO05D006091 2.3e-130 469.9 407 62.9
Psat7g046360 Pisum sativum HOM05D004851 ORTHO05D006091 3.0e-130 469.5 352 69.9
Potri.013G076200 Populus trichocarpa HOM05D004851 ORTHO05D006091 7.4e-129 464.9 410 64.4
TPR.G37402 Trifolium pratense HOM05D004851 ORTHO05D006091 6.3e-128 461.8 362 68.8
arahy.Tifrunner.gnm1.ann1.NF9HU2 Arachis hypogaea HOM05D004851 ORTHO05D006091 6.5e-125 451.8 461 56.6
arahy.Tifrunner.gnm1.ann1.VYGS4N Arachis hypogaea HOM05D004851 ORTHO05D006091 6.5e-125 451.8 461 56.6
MBI07_g19429_MAGBIO Magnolia biondii HOM05D004851 ORTHO05D006091 1.1e-124 451.1 410 62.4
Medtr8g093680 Medicago truncatula HOM05D004851 ORTHO05D006091 1.9e-124 450.3 355 69.0
MBI10_g03402_MAGBIO Magnolia biondii HOM05D004851 ORTHO05D006091 2.5e-124 449.9 409 62.3
Oeu010173.1 Olea europaea HOM05D004851 ORTHO05D006091 1.6e-123 447.2 400 64.2
arahy.Tifrunner.gnm1.ann1.UCI1EL Arachis hypogaea HOM05D004851 ORTHO05D006091 3.0e-122 443.0 473 55.0
Nitab4.5_0001003g0170 Nicotiana tabacum HOM05D004851 ORTHO05D006091 3.0e-122 443.0 491 55.0
MD07G1311200 Malus domestica HOM05D004851 ORTHO05D006091 4.3e-121 439.1 308 76.9
Gohir.D13G162900 Gossypium hirsutum HOM05D004851 ORTHO05D006091 4.8e-120 435.6 438 58.9
COL.COLO4_12970 Corchorus olitorius HOM05D004851 ORTHO05D006091 8.2e-120 434.9 460 57.0
vmacro07474 Vaccinium macrocarpon HOM05D004851 ORTHO05D006091 1.8e-119 433.7 517 50.7
MSTRG.27417 Avicennia marina HOM05D004851 ORTHO05D006091 2.4e-119 433.3 352 66.5
VMungo0540G0464 Vigna mungo HOM05D004851 ORTHO05D006091 2.9e-117 426.4 458 55.9
Cpa.g.sc34.168 Carica papaya HOM05D004851 ORTHO05D006091 8.5e-117 424.9 383 63.2
Cc09_g04170 Coffea canephora HOM05D004851 ORTHO05D006091 1.1e-116 424.5 296 73.6
Lsat_1_v5_gn_3_23200 Lactuca sativa HOM05D004851 ORTHO05D006091 1.9e-116 423.7 345 64.1
THA.LOC104823793 Tarenaya hassleriana HOM05D004851 ORTHO05D006091 1.2e-115 421.0 420 57.6
Gorai.013G185100 Gossypium raimondii HOM05D004851 ORTHO05D006091 1.6e-115 420.6 437 58.8
Gohir.A13G158200 Gossypium hirsutum HOM05D004851 ORTHO05D006091 1.4e-114 417.5 438 56.8
HPP92_005346 Vanilla planifolia HOM05D004851 ORTHO05D006091 1.4e-114 417.5 337 64.1
Phvul.009G105500 Phaseolus vulgaris HOM05D004851 ORTHO05D006091 2.6e-113 413.3 389 60.4
C02p37840 Brassica napus HOM05D004851 ORTHO05D006091 3.3e-113 412.9 496 53.8
DCAR_008779 Daucus carota HOM05D004851 ORTHO05D006091 4.4e-113 412.5 314 68.5
ATR0787G085 Amborella trichopoda HOM05D004851 ORTHO05D006091 9.7e-113 411.4 340 67.1
ECA246G2460 Erigeron canadensis HOM05D004851 ORTHO05D006091 9.7e-113 411.4 348 65.8
HanXRQChr08g0228141 Helianthus annuus HOM05D004851 ORTHO05D006091 2.2e-112 410.2 396 61.1
BcaC03g16030 Brassica carinata HOM05D004851 ORTHO05D006091 3.7e-112 409.5 497 53.5
BolC2t09800H Brassica oleracea HOM05D004851 ORTHO05D006091 3.7e-112 409.5 497 53.5
Hma1.2p1_3283F.1_g334850 Hydrangea macrophylla HOM05D004851 ORTHO05D006091 8.2e-112 408.3 310 71.6
AT1G64880 Arabidopsis thaliana HOM05D004851 ORTHO05D006091 9.1e-111 404.8 509 50.9
PSO017G3120 Papaver somniferum HOM05D004851 ORTHO05D006091 1.2e-110 404.4 488 50.6
CARHR056280 Cardamine hirsuta HOM05D004851 ORTHO05D006091 2.0e-110 403.7 492 51.8
Thhalv10002490m.g Eutrema salsugineum HOM05D004851 ORTHO05D006091 3.5e-110 402.9 505 51.7
A02p23990 Brassica napus HOM05D004851 ORTHO05D006091 1.0e-109 401.4 496 53.2
AL2G19340 Arabidopsis lyrata HOM05D004851 ORTHO05D006091 1.3e-109 401.0 508 51.0
Glyma.04G079800 Glycine max HOM05D004851 ORTHO05D006091 2.2e-109 400.2 364 60.4
PSO170G2140 Papaver somniferum HOM05D004851 ORTHO05D006091 2.2e-109 400.2 395 55.7
BraA02t07394Z Brassica rapa HOM05D004851 ORTHO05D006091 5.0e-109 399.1 496 52.8
Carub.0002s0996 Capsella rubella HOM05D004851 ORTHO05D006091 6.5e-109 398.7 506 50.6
Sp5g19120 Schrenkiella parvula HOM05D004851 ORTHO05D006091 6.5e-109 398.7 504 51.0
Zm00001eb229290 Zea mays HOM05D004851 ORTHO05D006091 2.5e-108 396.7 346 61.3
EL10Ac5g10580 Beta vulgaris HOM05D004851 ORTHO05D006091 5.5e-108 395.6 399 58.4
SGA_v2.0_scaffold75G25015 Striga asiatica HOM05D004851 ORTHO05D006091 6.1e-107 392.1 432 53.0
Os02g0102400 Oryza sativa ssp. japonica HOM05D004851 ORTHO05D006091 3.0e-106 389.8 369 57.5
BcaB05g23595 Brassica carinata HOM05D004851 ORTHO05D006091 8.8e-106 388.3 499 51.5
Hma1.2p1_2196F.1_g316850 Hydrangea macrophylla HOM05D004851 ORTHO05D006091 8.8e-106 388.3 273 75.5
arahy.Tifrunner.gnm1.ann1.BXG275 Arachis hypogaea HOM05D004851 ORTHO05D006091 5.7e-105 385.6 406 55.4
AUR62008058 Chenopodium quinoa HOM05D004851 ORTHO05D006091 6.5e-101 372.1 409 54.5
Glyma.06G081400 Glycine max HOM05D004851 ORTHO05D006091 8.5e-101 371.7 344 60.5
PSO764G0174 Papaver somniferum HOM05D004851 ORTHO05D006091 3.6e-99 366.3 401 54.1
CDE02G1790 Ceratophyllum demersum HOM05D004851 ORTHO05D006091 9.1e-95 351.7 303 61.4
Aqoxy2G03682 Aquilegia oxysepala HOM05D004851 ORTHO05D006091 4.5e-94 349.4 507 47.9
Hund19699 Selenicereus undatus HOM05D004851 ORTHO05D006091 2.5e-92 343.6 405 52.6
Aa31LG2G2120 Aethionema arabicum HOM05D004851 ORTHO05D006091 7.5e-89 332.0 511 44.8
CDE06G0392 Ceratophyllum demersum HOM05D004851 ORTHO05D006091 2.7e-86 323.6 347 56.2
ECA246G3904 Erigeron canadensis HOM05D004851 ORTHO05D006091 1.7e-85 320.9 340 51.2
Actinidia27036 Actinidia chinensis HOM05D004851 ORTHO05D006091 3.8e-85 319.7 335 56.1
SalBow1G5096 Salvia bowleyana HOM05D004851 ORTHO05D006091 1.1e-84 318.2 437 45.3
AUR62028634 Chenopodium quinoa HOM05D004851 ORTHO05D006091 1.2e-81 308.1 405 49.6
unitig_736.g22500 Utricularia gibba HOM05D004851 ORTHO05D006091 1.8e-74 284.3 363 47.7
PSO339G3159 Papaver somniferum HOM05D004851 ORTHO05D006091 3.2e-71 273.5 290 53.4
SalBow1G4565 Salvia bowleyana HOM05D004851 ORTHO05D006091 1.2e-67 261.5 244 56.1
SEGI_25717 Sequoiadendron giganteum HOM05D004851 ORTHO05D006091 1.2e-59 235.0 248 48.4
Ah.02g111010 Amaranthus hybridus HOM05D004851 ORTHO05D006091 2.6e-49 200.7 382 37.7
Actinidia20814 Actinidia chinensis HOM05D004851 ORTHO05D006091 8.1e-35 152.5 203 51.2
RcHm_v2.0_Chr3g0482801 Rosa chinensis HOM05D004851 ORTHO05D006091 5.4e-31 139.8 174 51.7
SalBow1G8063 Salvia bowleyana HOM05D004851 ORTHO05D006091 4.8e-27 126.7 126 52.4
RcHm_v2.0_Chr3g0482791 Rosa chinensis HOM05D004851 ORTHO05D006091 1.3e-21 108.6 53 92.5
Hma1.2p1_2196F.1_g316870 Hydrangea macrophylla HOM05D004851 ORTHO05D006091 1.9e-20 104.8 54 88.9
MBI14_g09475_MAGBIO Magnolia biondii HOM05D004851 ORTHO05D004104 4.3e-20 103.6 54 88.9
MBI12_g19411_MAGBIO Magnolia biondii HOM05D000054 ORTHO05D011619 3.4e-17 94.0 54 77.8
MBI11_g24763_MAGBIO Magnolia biondii HOM05D004851 ORTHO05D006091 2.5e-15 87.8 67 67.2
MBI09_g39943_MAGBIO Magnolia biondii HOM05D004851 ORTHO05D006091 1.1e-10 72.4 39 84.6
MBI09_g43839_MAGBIO Magnolia biondii HOM05D004851 ORTHO05D006091 1.8e-10 71.6 36 88.9
MBI10_g06902_MAGBIO Magnolia biondii HOM05D004851 ORTHO05D006091 1.5e-09 68.6 42 78.6
Mapoly0098s0036 Marchantia polymorpha HOM05D004851 ORTHO05D006091 2.0e-09 68.2 137 35.8
SalBow1G8714 Salvia bowleyana HOM05D004851 ORTHO05D006091 3.4e-09 67.4 91 41.8
MBI12_g31452_MAGBIO Magnolia biondii HOM05D004851 ORTHO05D006091 1.3e-08 65.5 54 64.8
Pp3c8_16260 Physcomitrium patens HOM05D004851 ORTHO05D006091 3.8e-08 63.9 133 33.8
MBI12_g39868_MAGBIO Magnolia biondii HOM05D004851 ORTHO05D006091 5.0e-08 63.5 39 76.9
AagrBONN_evm.TU.Sc2ySwM_228.993 Anthoceros agrestis HOM05D004851 ORTHO05D006091 6.5e-08 63.2 51 52.9
SMO361G0506 Selaginella moellendorffii HOM05D004851 ORTHO05D006091 4.2e-07 60.5 52 46.2
MCO11G545 Micromonas commoda HOM05D004851 ORTHO05D006091 9.4e-07 59.3 111 37.8
RcHm_v2.0_Chr4g0404671 Rosa chinensis HOM05D004851 ORTHO05D006091 9.4e-07 59.3 70 55.7
CBR_g50476 Chara braunii HOM05D004851 ORTHO05D006091 6.1e-06 56.6 62 43.5


User provided reference genes

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