Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_00288 Corylus avellana HOM05D000190 ORTHO05D000113 4.3e-95 351.3 172 100.0
Haze_16909 Corylus avellana HOM05D000190 ORTHO05D000113 2.1e-33 146.4 169 52.1
Cfa004451 Carpinus fangiana HOM05D000572 ORTHO05D000113 1.0e-32 144.1 158 53.8
Haze_16911 Corylus avellana HOM05D000190 ORTHO05D000113 1.1e-31 140.6 169 50.3
CiPaw.02G174900 Carya illinoinensis HOM05D000190 ORTHO05D000113 1.7e-19 100.1 184 37.5
CiPaw.02G175000 Carya illinoinensis HOM05D000190 ORTHO05D000113 1.4e-18 97.1 180 37.8
QL08p056430 Quercus lobata HOM05D000190 ORTHO05D000113 1.6e-17 93.6 170 37.6
QL08p056350 Quercus lobata HOM05D000190 ORTHO05D000113 2.1e-17 93.2 161 37.3
Haze_16912 Corylus avellana HOM05D000190 ORTHO05D000113 2.6e-15 86.3 151 41.1
Cfa001610 Carpinus fangiana HOM05D000190 ORTHO05D000113 6.3e-14 81.6 151 37.7
CiPaw.01G274400 Carya illinoinensis HOM05D000190 ORTHO05D000113 8.2e-14 81.3 185 33.5
Manes.10G044600 Manihot esculenta HOM05D000190 ORTHO05D000113 1.8e-13 80.1 169 36.7
QL08p056391 Quercus lobata HOM05D000190 ORTHO05D000113 9.1e-13 77.8 165 38.8
Cpa.g.sc53.58 Carica papaya HOM05D000190 ORTHO05D000113 1.2e-12 77.4 171 34.5
Eucgr.G02819 Eucalyptus grandis HOM05D000190 ORTHO05D000113 5.0e-11 72.0 162 34.0
Thecc.10G071000 Theobroma cacao HOM05D000190 ORTHO05D000113 1.1e-10 70.9 165 33.9
Dinv35737 Davidia involucrata HOM05D000190 ORTHO05D000113 4.2e-10 68.9 192 31.2
Duzib106G1016 Durio zibethinus HOM05D000190 ORTHO05D000113 5.5e-10 68.6 158 35.4
COL.COLO4_23708 Corchorus olitorius HOM05D000190 ORTHO05D000113 7.2e-10 68.2 168 32.7
Gorai.010G205000 Gossypium raimondii HOM05D000190 ORTHO05D000113 7.2e-10 68.2 178 33.7
Lj2g0014767 Lotus japonicus HOM05D000190 ORTHO05D000113 7.2e-10 68.2 191 31.4
CANSAT56G2283 Cannabis sativa HOM05D000190 ORTHO05D000113 1.2e-09 67.4 167 31.1
Thecc.09G258400 Theobroma cacao HOM05D000190 ORTHO05D000113 1.2e-09 67.4 191 30.4
Gorai.010G205100 Gossypium raimondii HOM05D000190 ORTHO05D000113 1.6e-09 67.0 160 35.0
Peaxi162Scf00356g00079 Petunia axillaris HOM05D000190 ORTHO05D000113 1.6e-09 67.0 202 29.7
arahy.Tifrunner.gnm1.ann1.NEM3MI Arachis hypogaea HOM05D000190 ORTHO05D000113 2.1e-09 66.6 165 33.3
QL07p044868 Quercus lobata HOM05D000190 ORTHO05D017235 2.1e-09 66.6 83 42.2
TWI15G0863 Tripterygium wilfordii HOM05D000190 ORTHO05D000113 2.7e-09 66.2 212 29.7
VMungo0720G0784 Vigna mungo HOM05D000190 ORTHO05D000113 2.7e-09 66.2 164 36.6
arahy.Tifrunner.gnm1.ann1.3YMU6I Arachis hypogaea HOM05D000190 ORTHO05D000113 3.6e-09 65.9 192 31.8
arahy.Tifrunner.gnm1.ann1.CV6J43 Arachis hypogaea HOM05D000190 ORTHO05D000113 3.6e-09 65.9 192 31.8
PGR142G0031 Punica granatum HOM05D000190 ORTHO05D000113 6.1e-09 65.1 173 32.9
QL07p044926 Quercus lobata HOM05D000190 ORTHO05D000113 6.1e-09 65.1 191 30.9
Lj1C918G8 Lonicera japonica HOM05D000190 ORTHO05D000113 8.0e-09 64.7 198 28.8
Gohir.D06G174800 Gossypium hirsutum HOM05D000190 ORTHO05D000113 1.0e-08 64.3 112 39.3
Peaxi162Scf00272g00224 Petunia axillaris HOM05D000190 ORTHO05D000113 1.0e-08 64.3 186 31.2
Sp2g03050 Schrenkiella parvula HOM05D000190 ORTHO05D000113 1.0e-08 64.3 172 32.6
Peaxi162Scf00351g00123 Petunia axillaris HOM05D000190 ORTHO05D000113 1.4e-08 63.9 192 30.7
ClCG05G020910 Citrullus lanatus HOM05D000190 ORTHO05D000113 1.8e-08 63.5 170 30.6
PGR142G3436 Punica granatum HOM05D000190 ORTHO05D000113 3.0e-08 62.8 172 32.0
Actinidia19692 Actinidia chinensis HOM05D000190 ORTHO05D000113 3.9e-08 62.4 183 30.6
Aa31LG2G9290 Aethionema arabicum HOM05D000190 ORTHO05D000113 5.2e-08 62.0 168 32.1
Potri.008G041400 Populus trichocarpa HOM05D000190 ORTHO05D000113 5.2e-08 62.0 175 33.7
TAR369G0723 Trochodendron aralioides HOM05D000190 ORTHO05D000113 5.2e-08 62.0 185 31.9
C01p38390 Brassica napus HOM05D000190 ORTHO05D000113 6.7e-08 61.6 195 31.3
Glyma.20G178800 Glycine max HOM05D000190 ORTHO05D000113 6.7e-08 61.6 167 34.7
Sed0002764 Sechium edule HOM05D000190 ORTHO05D000113 6.7e-08 61.6 130 35.4
Gohir.D06G177008 Gossypium hirsutum HOM05D000190 ORTHO05D000113 8.8e-08 61.2 175 31.4
Phvul.007G093600 Phaseolus vulgaris HOM05D000190 ORTHO05D000113 8.8e-08 61.2 164 34.1
Prupe.6G239000 Prunus persica HOM05D000190 ORTHO05D000113 8.8e-08 61.2 189 28.6
QL01p023136 Quercus lobata HOM05D000190 ORTHO05D000113 8.8e-08 61.2 198 28.3
Gohir.A07G116900 Gossypium hirsutum HOM05D000190 ORTHO05D000113 1.1e-07 60.8 192 28.6
Lalb_Chr03g0035981 Lupinus albus HOM05D000190 ORTHO05D000113 1.1e-07 60.8 158 29.1
MD03G1115500 Malus domestica HOM05D000190 ORTHO05D000113 1.1e-07 60.8 125 36.8
Lalb_Chr19g0129621 Lupinus albus HOM05D000190 ORTHO05D000113 1.5e-07 60.5 158 31.0
Actinidia40037 Actinidia chinensis HOM05D000190 ORTHO05D000113 2.0e-07 60.1 188 30.9
AL4G36500 Arabidopsis lyrata HOM05D000190 ORTHO05D000113 2.0e-07 60.1 167 29.9
AT2G39200 Arabidopsis thaliana HOM05D000190 ORTHO05D000113 2.0e-07 60.1 167 29.9
Eucgr.A01164 Eucalyptus grandis HOM05D000190 ORTHO05D000113 2.6e-07 59.7 183 29.0
MBI14_g19546_MAGBIO Magnolia biondii HOM05D000190 ORTHO05D000113 2.6e-07 59.7 194 29.9
TAR633G0102 Trochodendron aralioides HOM05D000190 ORTHO05D000113 2.6e-07 59.7 205 28.8
VMungo0464G0554 Vigna mungo HOM05D000190 ORTHO05D000113 2.6e-07 59.7 185 30.8
Gohir.A06G179012 Gossypium hirsutum HOM05D000190 ORTHO05D000113 3.3e-07 59.3 178 31.5
Prupe.2G215200 Prunus persica HOM05D000190 ORTHO05D000113 3.3e-07 59.3 168 33.3
RcHm_v2.0_Chr5g0059871 Rosa chinensis HOM05D000190 ORTHO05D000113 3.3e-07 59.3 192 28.6
Sed0021508 Sechium edule HOM05D000190 ORTHO05D000113 3.3e-07 59.3 136 34.6
TAR623G0813 Trochodendron aralioides HOM05D000190 ORTHO05D000113 3.3e-07 59.3 191 28.8
MSTRG.17819 Avicennia marina HOM05D000190 ORTHO05D000113 4.4e-07 58.9 133 32.3
MD11G1132700 Malus domestica HOM05D000190 ORTHO05D000113 4.4e-07 58.9 175 29.1
Nn2g10732 Nelumbo nucifera HOM05D000190 ORTHO05D000113 4.4e-07 58.9 195 28.2
Sabra10G0170200 Salix brachista HOM05D000190 ORTHO05D000113 4.4e-07 58.9 177 31.1
TAR636G0431 Trochodendron aralioides HOM05D000190 ORTHO05D000113 4.4e-07 58.9 197 26.9
AT1G61560 Arabidopsis thaliana HOM05D000190 ORTHO05D000113 5.7e-07 58.5 175 30.9
CiPaw.14G078600 Carya illinoinensis HOM05D000190 ORTHO05D000113 5.7e-07 58.5 195 27.7
COL.COLO4_36779 Corchorus olitorius HOM05D000190 ORTHO05D000113 5.7e-07 58.5 127 35.4
Glyma.10G212300 Glycine max HOM05D000190 ORTHO05D000113 5.7e-07 58.5 172 34.3
Gorai.001G130800 Gossypium raimondii HOM05D000190 ORTHO05D000113 5.7e-07 58.5 192 29.2
Hma1.2p1_1030F.1_g249910 Hydrangea macrophylla HOM05D000190 ORTHO05D000113 5.7e-07 58.5 102 35.3
Hma1.2p1_3258F.1_g334620 Hydrangea macrophylla HOM05D000190 ORTHO05D000113 5.7e-07 58.5 102 35.3
BraA01t03160Z Brassica rapa HOM05D000190 ORTHO05D000113 7.4e-07 58.2 174 32.8
CARHR133950 Cardamine hirsuta HOM05D000190 ORTHO05D000113 7.4e-07 58.2 167 30.5
Nitab4.5_0001352g0020 Nicotiana tabacum HOM05D000190 ORTHO05D000113 7.4e-07 58.2 195 31.8
Prupe.6G097900 Prunus persica HOM05D000190 ORTHO05D000113 7.4e-07 58.2 180 28.3
Aa31sc130G50 Aethionema arabicum HOM05D000190 ORTHO05D000113 9.7e-07 57.8 164 32.9
A01p30250 Brassica napus HOM05D000190 ORTHO05D000113 9.7e-07 57.8 198 31.3
Cc02_g11510 Coffea canephora HOM05D000190 ORTHO05D000113 9.7e-07 57.8 193 28.5
MELO3C025761.2 Cucumis melo HOM05D000190 ORTHO05D000113 9.7e-07 57.8 130 34.6
CsaV3_6G021740 Cucumis sativus L. HOM05D000190 ORTHO05D000113 9.7e-07 57.8 130 34.6
ECA248G2119 Erigeron canadensis HOM05D000190 ORTHO05D000113 9.7e-07 57.8 132 34.1
Eucgr.B02482 Eucalyptus grandis HOM05D000190 ORTHO05D000113 9.7e-07 57.8 164 29.3
Haze_23891 Corylus avellana HOM05D000190 ORTHO05D000113 1.3e-06 57.4 161 31.7
Duzib168G0170 Durio zibethinus HOM05D000190 ORTHO05D000113 1.3e-06 57.4 197 29.4
Gohir.D07G121300 Gossypium hirsutum HOM05D000190 ORTHO05D000113 1.3e-06 57.4 192 28.6
QL01p023106 Quercus lobata HOM05D000190 ORTHO05D000113 1.3e-06 57.4 106 38.7
Rhsim09G0152900 Rhododendron simsii HOM05D000190 ORTHO05D000113 1.3e-06 57.4 188 33.0
Sabra10G0170300 Salix brachista HOM05D000190 ORTHO05D000113 1.3e-06 57.4 171 35.1
BolC1t03806H Brassica oleracea HOM05D000190 ORTHO05D000113 1.7e-06 57.0 195 29.7
Carub.0004s2124 Capsella rubella HOM05D000190 ORTHO05D000113 1.7e-06 57.0 167 28.7
Duzib114G0970 Durio zibethinus HOM05D000190 ORTHO05D000113 1.7e-06 57.0 165 33.9
Manes.07G104100 Manihot esculenta HOM05D000190 ORTHO05D000113 1.7e-06 57.0 169 34.3
Medtr6g033330 Medicago truncatula HOM05D000190 ORTHO05D000113 1.7e-06 57.0 136 34.6
Cpa.g.sc435.5 Carica papaya HOM05D000190 ORTHO05D000113 2.2e-06 56.6 192 28.6
Migut.N02609 Erythranthe guttata HOM05D000190 ORTHO05D000113 2.2e-06 56.6 125 32.8
Glyma.16G145500 Glycine max HOM05D000190 ORTHO05D000113 2.2e-06 56.6 195 29.7
Gohir.A05G413100 Gossypium hirsutum HOM05D000190 ORTHO05D000113 2.2e-06 56.6 168 30.4
MD12G1120800 Malus domestica HOM05D000190 ORTHO05D000113 2.2e-06 56.6 189 28.0
Sabra08G0028300 Salix brachista HOM05D000190 ORTHO05D000113 2.2e-06 56.6 177 32.2
GSVIVG01016302001 Vitis vinifera HOM05D000190 ORTHO05D000113 2.2e-06 56.6 163 33.1
Eucgr.J00942 Eucalyptus grandis HOM05D000190 ORTHO05D000113 2.8e-06 56.2 170 31.2
AL2G14730 Arabidopsis lyrata HOM05D000190 ORTHO05D000113 3.7e-06 55.8 178 29.8
Carub.0002s0366 Capsella rubella HOM05D000190 ORTHO05D000113 3.7e-06 55.8 175 28.0
Nitab4.5_0001275g0010 Nicotiana tabacum HOM05D000190 ORTHO05D000113 3.7e-06 55.8 134 32.8
Oeu059098.1 Olea europaea HOM05D000190 ORTHO05D000113 3.7e-06 55.8 129 33.3
Cfa011351 Carpinus fangiana HOM05D000190 ORTHO05D000113 4.8e-06 55.5 152 32.9
ClCG03G002270 Citrullus lanatus HOM05D000190 ORTHO05D000113 4.8e-06 55.5 130 31.5
CsaV3_1G012950 Cucumis sativus L. HOM05D000190 ORTHO05D000113 4.8e-06 55.5 130 30.8
Dinv32768 Davidia involucrata HOM05D000190 ORTHO05D000113 4.8e-06 55.5 132 31.8
PSO063G5999 Papaver somniferum HOM05D000190 ORTHO05D000113 4.8e-06 55.5 132 31.8
PSO063G6260 Papaver somniferum HOM05D000190 ORTHO05D000113 4.8e-06 55.5 132 31.8
PSO063G6390 Papaver somniferum HOM05D000190 ORTHO05D000113 4.8e-06 55.5 132 31.8
Sp4g21530 Schrenkiella parvula HOM05D000190 ORTHO05D000113 4.8e-06 55.5 168 29.8
CAN.G1602.8 Capsicum annuum HOM05D000190 ORTHO05D000113 6.3e-06 55.1 185 29.7
MELO3C005044.2 Cucumis melo HOM05D000190 ORTHO05D000113 6.3e-06 55.1 186 27.4
CsaV3_5G036400 Cucumis sativus L. HOM05D000190 ORTHO05D000113 6.3e-06 55.1 154 29.9
Phvul.004G071700 Phaseolus vulgaris HOM05D000190 ORTHO05D000113 6.3e-06 55.1 185 30.3
A08p33520 Brassica napus HOM05D000190 ORTHO05D000113 8.2e-06 54.7 91 37.4
Rhsim05G0183600 Rhododendron simsii HOM05D000190 ORTHO05D000113 8.2e-06 54.7 188 29.8
GSVIVG01016304001 Vitis vinifera HOM05D000190 ORTHO05D000113 8.2e-06 54.7 172 31.4


User provided reference genes

Program Settings