Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_00245 Corylus avellana HOM05D006088 ORTHO05D007281 2.7e-180 635.2 311 100.0
Haze_00251 Corylus avellana HOM05D006088 ORTHO05D007281 5.0e-179 630.9 311 99.4
QL09p007776 Quercus lobata HOM05D006088 ORTHO05D007281 3.9e-115 418.7 478 51.3
COL.COLO4_16809 Corchorus olitorius HOM05D006088 ORTHO05D007281 1.0e-102 377.5 460 48.0
Dinv29251 Davidia involucrata HOM05D006088 ORTHO05D007281 1.1e-101 374.0 484 45.5
Atru.chr12.2268 Acer truncatum HOM05D006088 ORTHO05D007281 9.4e-101 370.9 481 46.4
Duzib068G0049 Durio zibethinus HOM05D006088 ORTHO05D007281 1.2e-100 370.5 477 46.8
Atru.chr12.2276 Acer truncatum HOM05D006088 ORTHO05D007281 6.1e-100 368.2 481 46.2
Prupe.2G314700 Prunus persica HOM05D006088 ORTHO05D007281 2.3e-99 366.3 479 46.8
Thecc.03G202800 Theobroma cacao HOM05D006088 ORTHO05D007281 2.6e-98 362.8 477 44.9
GSVIVG01038590001 Vitis vinifera HOM05D006088 ORTHO05D007281 5.7e-98 361.7 495 45.9
Actinidia34240 Actinidia chinensis HOM05D006088 ORTHO05D007281 2.2e-97 359.8 483 45.1
Eucgr.A01442 Eucalyptus grandis HOM05D006088 ORTHO05D007281 2.8e-97 359.4 482 45.6
MD07G1295100 Malus domestica HOM05D006088 ORTHO05D007281 2.8e-97 359.4 484 45.9
CSS0044490 Camellia sinensis var. sinensis HOM05D006088 ORTHO05D007281 8.2e-97 357.8 482 45.2
Potri.015G009500 Populus trichocarpa HOM05D006088 ORTHO05D007281 8.2e-97 357.8 485 44.9
CSS0005298 Camellia sinensis var. sinensis HOM05D006088 ORTHO05D007281 1.4e-96 357.1 482 45.2
Gohir.A09G186501 Gossypium hirsutum HOM05D006088 ORTHO05D007281 1.4e-96 357.1 477 43.8
Gorai.006G202600 Gossypium raimondii HOM05D006088 ORTHO05D007281 1.4e-96 357.1 477 43.8
RcHm_v2.0_Chr1g0381781 Rosa chinensis HOM05D006088 ORTHO05D007281 9.1e-96 354.4 480 45.8
Gohir.D09G180600 Gossypium hirsutum HOM05D006088 ORTHO05D007281 2.0e-95 353.2 477 43.6
Sabra15G0007500 Salix brachista HOM05D006088 ORTHO05D007281 4.5e-95 352.1 485 44.1
arahy.Tifrunner.gnm1.ann1.W8KES2 Arachis hypogaea HOM05D006088 ORTHO05D007281 1.0e-94 350.9 471 45.2
Ca_12770_v3 Cicer arietinum L. HOM05D006088 ORTHO05D007281 1.0e-94 350.9 482 43.2
CANSAT21G0843 Cannabis sativa HOM05D006088 ORTHO05D007281 2.9e-94 349.4 484 44.4
PGR042G2967 Punica granatum HOM05D006088 ORTHO05D007281 8.5e-94 347.8 483 45.1
FAN03G2371 Fragaria x ananassa HOM05D006088 ORTHO05D007281 1.1e-93 347.4 481 45.1
FAN03G2860 Fragaria x ananassa HOM05D006088 ORTHO05D007281 1.1e-93 347.4 481 45.1
Lj1A1022T49 Lonicera japonica HOM05D006088 ORTHO05D007281 1.5e-93 347.1 483 44.5
FAN10G3213 Fragaria x ananassa HOM05D006088 ORTHO05D007281 2.5e-93 346.3 481 44.9
FAN10G3559 Fragaria x ananassa HOM05D006088 ORTHO05D007281 2.5e-93 346.3 481 44.9
TAR629G2736 Trochodendron aralioides HOM05D006088 ORTHO05D007281 2.5e-93 346.3 484 43.0
FAN01G2391 Fragaria x ananassa HOM05D006088 ORTHO05D007281 7.2e-93 344.7 481 45.5
Lalb_Chr04g0253281 Lupinus albus HOM05D006088 ORTHO05D007281 1.2e-92 344.0 480 44.2
Hma1.2p1_0707F.1_g207070 Hydrangea macrophylla HOM05D006088 ORTHO05D007281 1.6e-92 343.6 483 43.3
FvH4_7g32160 Fragaria vesca HOM05D006088 ORTHO05D007281 2.1e-92 343.2 481 44.9
Rhsim03G0211500 Rhododendron simsii HOM05D006088 ORTHO05D007281 2.1e-92 343.2 483 42.9
Nn1g00333 Nelumbo nucifera HOM05D006088 ORTHO05D007281 3.6e-92 342.4 483 42.7
Oeu037044.1 Olea europaea HOM05D006088 ORTHO05D007281 6.1e-92 341.7 485 44.3
TPR.G24535 Trifolium pratense HOM05D006088 ORTHO05D007281 3.9e-91 339.0 479 42.8
TWI39G0339 Tripterygium wilfordii HOM05D006088 ORTHO05D007281 3.9e-91 339.0 481 42.8
Peaxi162Scf00740g00327 Petunia axillaris HOM05D006088 ORTHO05D007281 8.8e-91 337.8 482 42.1
Sopen03g022590 Solanum pennellii HOM05D006088 ORTHO05D007281 2.0e-90 336.7 482 43.4
Psat6g035960 Pisum sativum HOM05D006088 ORTHO05D007281 2.6e-90 336.3 479 43.2
FAN06G1538 Fragaria x ananassa HOM05D006088 ORTHO05D007281 4.4e-90 335.5 481 44.5
Nitab4.5_0002780g0060 Nicotiana tabacum HOM05D006088 ORTHO05D007281 4.4e-90 335.5 442 45.2
Solyc03g082850.3 Solanum lycopersicum HOM05D006088 ORTHO05D007281 1.3e-89 334.0 482 43.2
arahy.Tifrunner.gnm1.ann1.F1TPPK Arachis hypogaea HOM05D006088 ORTHO05D007281 3.7e-89 332.4 495 42.6
SGA_v2.0_scaffold44G16827 Striga asiatica HOM05D006088 ORTHO05D007281 8.2e-89 331.3 470 43.4
THA.LOC104814937 Tarenaya hassleriana HOM05D006088 ORTHO05D007281 1.4e-88 330.5 473 42.7
PGSC0003DMG400018542 Solanum tuberosum HOM05D006088 ORTHO05D007281 4.1e-88 328.9 482 42.3
vmacro06404 Vaccinium macrocarpon HOM05D006088 ORTHO05D007281 1.2e-87 327.4 526 40.1
vmacro06403 Vaccinium macrocarpon HOM05D006088 ORTHO05D007281 3.5e-87 325.9 486 42.8
DCAR_014551 Daucus carota HOM05D006088 ORTHO05D007281 6.5e-86 321.6 474 42.2
Lj5g0026434 Lotus japonicus HOM05D006088 ORTHO05D007281 1.9e-85 320.1 489 39.7
PSO063G3091 Papaver somniferum HOM05D006088 ORTHO05D007281 2.5e-85 319.7 478 42.3
CsaV3_3G019690 Cucumis sativus L. HOM05D006088 ORTHO05D007281 4.2e-85 318.9 486 42.2
Migut.F00188 Erythranthe guttata HOM05D006088 ORTHO05D007281 1.2e-84 317.4 482 41.3
MELO3C019378.2 Cucumis melo HOM05D006088 ORTHO05D007281 2.7e-84 316.2 485 42.3
Carub.0006s2216 Capsella rubella HOM05D006088 ORTHO05D007281 4.7e-84 315.5 473 41.2
BcaC03g17987 Brassica carinata HOM05D006088 ORTHO05D007281 1.4e-83 313.9 449 43.4
AUR62035569 Chenopodium quinoa HOM05D006088 ORTHO05D007281 1.4e-83 313.9 453 42.8
Thhalv10004042m.g Eutrema salsugineum HOM05D006088 ORTHO05D007281 2.3e-83 313.2 474 42.0
Sp2g22980 Schrenkiella parvula HOM05D006088 ORTHO05D007281 5.2e-83 312.0 473 41.2
Sed0011789 Sechium edule HOM05D006088 ORTHO05D007281 6.8e-83 311.6 484 41.7
MSTRG.27009 Avicennia marina HOM05D006088 ORTHO05D007281 2.0e-82 310.1 482 41.1
Aa31LG11G3620 Aethionema arabicum HOM05D006088 ORTHO05D007281 2.6e-82 309.7 474 42.4
CARHR189110 Cardamine hirsuta HOM05D006088 ORTHO05D007281 3.4e-82 309.3 473 40.8
HanXRQChr04g0100451 Helianthus annuus HOM05D006088 ORTHO05D007281 3.4e-82 309.3 480 40.6
AT5G24340 Arabidopsis thaliana HOM05D006088 ORTHO05D007281 5.7e-82 308.5 474 41.4
MBI12_g21748_MAGBIO Magnolia biondii HOM05D006088 ORTHO05D007281 2.2e-81 306.6 479 40.3
Lsat_1_v5_gn_2_135240 Lactuca sativa HOM05D006088 ORTHO05D007281 4.8e-81 305.4 465 42.6
BcaC03g17984 Brassica carinata HOM05D006088 ORTHO05D007281 1.1e-80 304.3 473 41.0
C02p60380 Brassica napus HOM05D006088 ORTHO05D007281 1.1e-80 304.3 473 41.0
EL10Ac3g05241 Beta vulgaris HOM05D006088 ORTHO05D007281 1.4e-80 303.9 494 39.9
CAN.G481.44 Capsicum annuum HOM05D006088 ORTHO05D007281 1.8e-80 303.5 497 39.8
Sc25g0000960 Simmondsia chinensis HOM05D006088 ORTHO05D007281 3.1e-80 302.8 489 40.3
Aqoxy5G04265 Aquilegia oxysepala HOM05D006088 ORTHO05D007281 4.1e-80 302.4 489 38.0
BcaB07g29905 Brassica carinata HOM05D006088 ORTHO05D007281 7.0e-80 301.6 474 40.9
BolC2t12093H Brassica oleracea HOM05D006088 ORTHO05D007281 7.0e-80 301.6 473 40.8
A02p40650 Brassica napus HOM05D006088 ORTHO05D007281 9.1e-80 301.2 474 41.1
BraA02t09012Z Brassica rapa HOM05D006088 ORTHO05D007281 3.5e-79 299.3 474 40.7
BcaC03g17985 Brassica carinata HOM05D006088 ORTHO05D007281 4.5e-79 298.9 473 41.0
Nitab4.5_0005326g0020 Nicotiana tabacum HOM05D006088 ORTHO05D007281 4.5e-79 298.9 471 40.3
AUR62006059 Chenopodium quinoa HOM05D006088 ORTHO05D007281 1.7e-78 297.0 494 39.5
Cpa.g.sc3.114 Carica papaya HOM05D006088 ORTHO05D007281 5.0e-78 295.4 448 43.3
Glyma.13G078800 Glycine max HOM05D006088 ORTHO05D007281 3.2e-77 292.7 478 40.4
Phvul.001G074500 Phaseolus vulgaris HOM05D006088 ORTHO05D007281 6.1e-76 288.5 481 39.7
Hund21022 Selenicereus undatus HOM05D006088 ORTHO05D007281 5.2e-75 285.4 503 38.2
CiPaw.06G044500 Carya illinoinensis HOM05D006088 ORTHO05D007281 4.4e-74 282.3 405 45.2
unitig_52.g17713 Utricularia gibba HOM05D006088 ORTHO05D007281 2.2e-73 280.0 439 39.9
ECA238G4490 Erigeron canadensis HOM05D006088 ORTHO05D007281 2.3e-70 270.0 489 38.0
Os07g0452400 Oryza sativa ssp. japonica HOM05D006088 ORTHO05D007281 1.5e-69 267.3 457 38.3
HPP92_025612 Vanilla planifolia HOM05D006088 ORTHO05D007281 1.6e-68 263.8 492 35.8
Manes.01G039200 Manihot esculenta HOM05D006088 ORTHO05D007281 6.1e-68 261.9 415 41.7
ATR0757G203 Amborella trichopoda HOM05D006088 ORTHO05D007281 2.0e-66 256.9 483 36.4
Cc02_g01220 Coffea canephora HOM05D006088 ORTHO05D007281 2.2e-65 253.4 428 39.7
Ciclev10020182m.g Citrus clementina HOM05D006088 ORTHO05D007281 3.5e-63 246.1 405 41.2
CDE02G1851 Ceratophyllum demersum HOM05D006088 ORTHO05D007281 5.9e-63 245.4 428 38.1
Glyma.14G150400 Glycine max HOM05D006088 ORTHO05D007281 9.5e-61 238.0 277 49.1
SalBow4G2097 Salvia bowleyana HOM05D006088 ORTHO05D007281 2.8e-60 236.5 208 58.2
DCAR_010586 Daucus carota HOM05D006088 ORTHO05D007281 2.7e-55 219.9 236 49.2
Cfa016204 Carpinus fangiana HOM05D006088 ORTHO05D007281 1.9e-53 213.8 110 94.5
Zm00001eb096690 Zea mays HOM05D006088 ORTHO05D007281 2.1e-52 210.3 208 52.9
arahy.Tifrunner.gnm1.ann1.IYG6N7 Arachis hypogaea HOM05D006088 ORTHO05D007281 1.5e-50 204.1 274 47.8
AL6G35860 Arabidopsis lyrata HOM05D006088 ORTHO05D007281 1.9e-45 187.2 380 35.5
Ca_12778_v3 Cicer arietinum L. HOM05D006088 ORTHO05D007281 2.5e-45 186.8 369 34.4
Hma1.2p1_0707F.1_g207060 Hydrangea macrophylla HOM05D006088 ORTHO05D007281 4.7e-44 182.6 370 34.6
A02p40390 Brassica napus HOM05D006088 ORTHO05D007281 4.1e-40 169.5 195 48.7
arahy.Tifrunner.gnm1.ann1.GS5K3D Arachis hypogaea HOM05D006088 ORTHO05D007281 6.0e-39 165.6 188 50.0
SMO266G0077 Selaginella moellendorffii HOM05D006088 ORTHO05D007281 1.2e-36 157.9 422 29.9
Cc11_g07360 Coffea canephora HOM05D006088 ORTHO05D007281 6.6e-30 135.6 109 59.6
Mapoly0133s0016 Marchantia polymorpha HOM05D006088 ORTHO05D007281 7.3e-29 132.1 212 39.2
AagrBONN_evm.TU.Sc2ySwM_117.2926 Anthoceros agrestis HOM05D006088 ORTHO05D007281 9.6e-29 131.7 210 35.7
VMungo0647G0665 Vigna mungo HOM05D006088 ORTHO05D007281 3.6e-28 129.8 64 84.4
Pp3c11_25950 Physcomitrium patens HOM05D006088 ORTHO05D007281 3.8e-25 119.8 223 35.0
Cc00_g34690 Coffea canephora HOM05D006088 ORTHO05D007281 2.4e-24 117.1 94 60.6
PSO675G7769 Papaver somniferum HOM05D006088 ORTHO05D007281 8.1e-20 102.1 120 48.3
PSO732G0342 Papaver somniferum HOM05D006088 ORTHO05D007281 1.1e-19 101.7 122 50.0
A02p40610 Brassica napus HOM05D006088 ORTHO05D007281 7.1e-16 89.0 129 44.2
A02p40510 Brassica napus HOM05D006088 ORTHO05D007281 1.6e-15 87.8 129 44.2
Dinv35357 Davidia involucrata HOM05D006088 ORTHO05D007281 3.9e-14 83.2 45 75.6
CBR_g51519 Chara braunii HOM05D000019 ORTHO05D000353 9.6e-13 78.6 196 31.6
SEGI_18369 Sequoiadendron giganteum HOM05D006088 ORTHO05D007281 4.9e-09 66.2 155 28.4
A02p40350 Brassica napus HOM05D006088 ORTHO05D007281 4.2e-08 63.2 104 43.3


User provided reference genes

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