Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_00196 Corylus avellana HOM05D002733 ORTHO05D003856 3.6e-117 424.9 205 100.0
Cfa016245 Carpinus fangiana HOM05D002733 ORTHO05D003856 1.5e-54 216.9 140 74.3
Haze_00185 Corylus avellana HOM05D002733 ORTHO05D003856 7.7e-51 204.5 161 65.2
Cfa016244 Carpinus fangiana HOM05D002733 ORTHO05D003856 5.9e-35 151.8 158 52.5
Haze_00197 Corylus avellana HOM05D002733 ORTHO05D003856 1.2e-32 144.1 120 57.5
CiPaw.03G015000 Carya illinoinensis HOM05D002733 ORTHO05D003856 3.7e-29 132.5 131 47.3
Haze_23259 Corylus avellana HOM05D002733 ORTHO05D003856 1.1e-28 131.0 145 44.8
Cfa009897 Carpinus fangiana HOM05D002733 ORTHO05D003856 2.4e-28 129.8 170 41.8
CiPaw.03G015300 Carya illinoinensis HOM05D002733 ORTHO05D003856 5.3e-28 128.6 141 44.7
Manes.03G176000 Manihot esculenta HOM05D002733 ORTHO05D003856 2.0e-27 126.7 146 43.2
CiPaw.03G014800 Carya illinoinensis HOM05D002733 ORTHO05D003856 2.7e-27 126.3 150 42.7
CiPaw.03G014700 Carya illinoinensis HOM05D002733 ORTHO05D003856 3.5e-27 125.9 129 45.7
Cpa.g.sc81.85 Carica papaya HOM05D002733 ORTHO05D003856 4.5e-27 125.6 156 41.7
Ciclev10010395m.g Citrus clementina HOM05D002733 ORTHO05D003856 7.7e-27 124.8 133 48.9
FAN19G2118 Fragaria x ananassa HOM05D002733 ORTHO05D003856 7.7e-27 124.8 126 48.4
RcHm_v2.0_Chr2g0120751 Rosa chinensis HOM05D002733 ORTHO05D003856 7.7e-27 124.8 138 45.7
Manes.03G176200 Manihot esculenta HOM05D002733 ORTHO05D003856 2.2e-26 123.2 127 47.2
Potri.001G397100 Populus trichocarpa HOM05D002733 ORTHO05D003856 6.5e-26 121.7 132 46.2
FAN23G1485 Fragaria x ananassa HOM05D002733 ORTHO05D003856 2.5e-25 119.8 127 46.5
Sabra16G0260100 Salix brachista HOM05D002733 ORTHO05D003856 2.5e-25 119.8 132 46.2
Actinidia20408 Actinidia chinensis HOM05D002733 ORTHO05D003856 3.2e-25 119.4 151 43.0
FvH4_1g16231 Fragaria vesca HOM05D002733 ORTHO05D003856 3.2e-25 119.4 129 45.7
FAN26G1179 Fragaria x ananassa HOM05D002733 ORTHO05D003856 3.2e-25 119.4 138 44.2
FAN23G1126 Fragaria x ananassa HOM05D002733 ORTHO05D003856 4.2e-25 119.0 131 45.8
FvH4_5g06160 Fragaria vesca HOM05D002733 ORTHO05D003856 5.5e-25 118.6 143 45.5
FAN13G0375 Fragaria x ananassa HOM05D002733 ORTHO05D003856 5.5e-25 118.6 143 45.5
FvH4_1g24261 Fragaria vesca HOM05D002733 ORTHO05D003856 7.2e-25 118.2 131 45.8
FAN18G0094 Fragaria x ananassa HOM05D002733 ORTHO05D003856 9.4e-25 117.9 143 45.5
FAN28G1642 Fragaria x ananassa HOM05D000949 ORTHO05D001276 1.2e-24 117.5 131 45.8
RcHm_v2.0_Chr7g0192641 Rosa chinensis HOM05D002733 ORTHO05D003856 2.1e-24 116.7 138 44.2
Solyc12g007300.1 Solanum lycopersicum HOM05D002733 ORTHO05D003856 4.7e-24 115.5 147 38.8
Sopen12g003260 Solanum pennellii HOM05D002733 ORTHO05D003856 4.7e-24 115.5 147 38.8
Duzib168G2229 Durio zibethinus HOM05D002733 ORTHO05D003856 6.1e-24 115.2 138 44.2
MELO3C004101.2 Cucumis melo HOM05D002733 ORTHO05D003856 8.0e-24 114.8 124 45.2
Prupe.7G223800 Prunus persica HOM05D002733 ORTHO05D003856 1.0e-23 114.4 126 44.4
CSS0001293 Camellia sinensis var. sinensis HOM05D002733 ORTHO05D003856 1.8e-23 113.6 133 43.6
Duzib213G0038 Durio zibethinus HOM05D002733 ORTHO05D003856 1.8e-23 113.6 127 46.5
Thecc.09G104200 Theobroma cacao HOM05D002733 ORTHO05D003856 1.8e-23 113.6 138 41.3
Lj3g0006952 Lotus japonicus HOM05D002733 ORTHO05D003856 2.3e-23 113.2 135 40.7
Ciclev10007038m.g Citrus clementina HOM05D002733 ORTHO05D003856 4.0e-23 112.5 152 40.1
Hma1.2p1_1080F.1_g255020 Hydrangea macrophylla HOM05D002733 ORTHO05D003856 4.0e-23 112.5 133 40.6
Thecc.07G171000 Theobroma cacao HOM05D002733 ORTHO05D003856 4.0e-23 112.5 137 42.3
CsaV3_3G004840 Cucumis sativus L. HOM05D002733 ORTHO05D003856 5.2e-23 112.1 123 43.9
MD00G1107900 Malus domestica HOM05D002733 ORTHO05D003856 5.2e-23 112.1 126 46.0
Gohir.D06G064250 Gossypium hirsutum HOM05D002733 ORTHO05D003856 8.8e-23 111.3 142 40.8
Gohir.A06G065650 Gossypium hirsutum HOM05D002733 ORTHO05D003856 1.2e-22 110.9 160 38.1
Gorai.010G075000 Gossypium raimondii HOM05D002733 ORTHO05D003856 1.5e-22 110.5 142 40.8
Prupe.7G223900 Prunus persica HOM05D002733 ORTHO05D003856 2.0e-22 110.2 126 42.9
PGSC0003DMG400000368 Solanum tuberosum HOM05D002733 ORTHO05D003856 2.0e-22 110.2 147 37.4
Duzib213G1035 Durio zibethinus HOM05D002733 ORTHO05D003856 2.6e-22 109.8 128 44.5
Glyma.04G133200 Glycine max HOM05D002733 ORTHO05D003856 2.6e-22 109.8 156 35.3
TPR.G1412 Trifolium pratense HOM05D002733 ORTHO05D003856 4.4e-22 109.0 131 41.2
QL02p042555 Quercus lobata HOM05D002733 ORTHO05D003856 1.3e-21 107.5 132 47.0
CAN.G1774.3 Capsicum annuum HOM05D002733 ORTHO05D003856 2.2e-21 106.7 138 37.0
TPR.G1395 Trifolium pratense HOM05D002733 ORTHO05D003856 2.8e-21 106.3 125 40.0
Actinidia09441 Actinidia chinensis HOM05D002733 ORTHO05D003856 3.7e-21 105.9 138 39.1
QL02p042807 Quercus lobata HOM05D002733 ORTHO05D003856 4.8e-21 105.5 132 46.2
CiPaw.03G015100 Carya illinoinensis HOM05D002733 ORTHO05D003856 8.3e-21 104.8 119 44.5
Lj1g0000886 Lotus japonicus HOM05D002733 ORTHO05D003856 8.3e-21 104.8 124 38.7
TPR.G8024 Trifolium pratense HOM05D002733 ORTHO05D003856 1.1e-20 104.4 125 42.4
VMungo1080G0152 Vigna mungo HOM05D002733 ORTHO05D003856 1.4e-20 104.0 119 39.5
Medtr0267s0030 Medicago truncatula HOM05D002733 ORTHO05D003856 1.8e-20 103.6 158 39.2
TPR.G18869 Trifolium pratense HOM05D004715 ORTHO05D005644 1.8e-20 103.6 122 41.0
Sed0022151 Sechium edule HOM05D002733 ORTHO05D003856 3.1e-20 102.8 132 41.7
VMungo1080G0686 Vigna mungo HOM05D002733 ORTHO05D003856 4.1e-20 102.4 119 38.7
Medtr3g013810 Medicago truncatula HOM05D002733 ORTHO05D003856 5.4e-20 102.1 157 38.9
TPR.G12039 Trifolium pratense HOM05D002733 ORTHO05D003856 5.4e-20 102.1 128 39.8
MD02G1059300 Malus domestica HOM05D002733 ORTHO05D003856 7.0e-20 101.7 138 39.9
COL.COLO4_34789 Corchorus olitorius HOM05D002733 ORTHO05D003856 9.1e-20 101.3 138 40.6
Medtr3g013920 Medicago truncatula HOM05D002733 ORTHO05D003856 1.2e-19 100.9 157 38.9
Rhsim05G0042200 Rhododendron simsii HOM05D002733 ORTHO05D003856 1.2e-19 100.9 137 40.1
TPR.G1447 Trifolium pratense HOM05D002733 ORTHO05D003856 1.2e-19 100.9 132 41.7
MD15G1316300 Malus domestica HOM05D002733 ORTHO05D003856 1.6e-19 100.5 126 42.9
Phvul.005G031300 Phaseolus vulgaris HOM05D002733 ORTHO05D003856 1.6e-19 100.5 130 36.9
Sed0027145 Sechium edule HOM05D002733 ORTHO05D003856 2.0e-19 100.1 121 40.5
Medtr3g013820 Medicago truncatula HOM05D002733 ORTHO05D003856 2.7e-19 99.8 157 38.2
Medtr3g013900 Medicago truncatula HOM05D002733 ORTHO05D003856 2.7e-19 99.8 157 38.2
Sed0017653 Sechium edule HOM05D002733 ORTHO05D003856 2.3e-18 96.7 113 42.5
DCAR_003269 Daucus carota HOM05D002733 ORTHO05D003856 3.8e-18 95.9 129 43.4
QL01p018928 Quercus lobata HOM05D002733 ORTHO05D003856 3.2e-17 92.8 145 38.6
QL01p018939 Quercus lobata HOM05D002733 ORTHO05D003856 4.2e-17 92.4 138 39.1
Aqoxy7G01497 Aquilegia oxysepala HOM05D002733 ORTHO05D003856 5.5e-17 92.0 131 38.9
Eucgr.L02178 Eucalyptus grandis HOM05D002733 ORTHO05D003856 5.5e-17 92.0 134 35.1
Nitab4.5_0001888g0040 Nicotiana tabacum HOM05D002733 ORTHO05D003856 5.5e-17 92.0 151 35.8
Nitab4.5_0000316g0140 Nicotiana tabacum HOM05D002733 ORTHO05D003856 9.5e-17 91.3 151 35.8
Peaxi162Scf00023g00136 Petunia axillaris HOM05D002733 ORTHO05D003856 9.5e-17 91.3 129 37.2
PGSC0003DMG400000371 Solanum tuberosum HOM05D002733 ORTHO05D003856 1.2e-16 90.9 129 38.0
Phvul.005G028900 Phaseolus vulgaris HOM05D002733 ORTHO05D003856 1.6e-16 90.5 155 31.6
DCAR_028226 Daucus carota HOM05D002733 ORTHO05D003856 2.8e-16 89.7 125 36.0
Peaxi162Scf00665g00126 Petunia axillaris HOM05D002733 ORTHO05D003856 2.8e-16 89.7 108 41.7
QL01p018935 Quercus lobata HOM05D002733 ORTHO05D003856 4.7e-16 89.0 133 39.1
Eucgr.C01014 Eucalyptus grandis HOM05D002733 ORTHO05D003856 6.1e-16 88.6 116 36.2
Aqoxy1G01499 Aquilegia oxysepala HOM05D002733 ORTHO05D003856 4.0e-15 85.9 125 38.4
Sp4g22450 Schrenkiella parvula HOM05D002733 ORTHO05D003856 4.0e-15 85.9 114 40.4
DCAR_014131 Daucus carota HOM05D002733 ORTHO05D003856 6.8e-15 85.1 126 37.3
DCAR_003268 Daucus carota HOM05D002733 ORTHO05D003856 1.2e-14 84.3 137 35.8
Peaxi162Scf00665g00148 Petunia axillaris HOM05D002733 ORTHO05D003856 1.5e-14 84.0 128 40.6
Aqoxy2G03580 Aquilegia oxysepala HOM05D002733 ORTHO05D003856 2.0e-14 83.6 127 33.9
Sp5g18240 Schrenkiella parvula HOM05D002733 ORTHO05D003856 2.6e-14 83.2 114 38.6
AL4G37790 Arabidopsis lyrata HOM05D002733 ORTHO05D003856 3.4e-14 82.8 114 39.5
COL.COLO4_32232 Corchorus olitorius HOM05D002733 ORTHO05D003856 3.4e-14 82.8 142 38.7
BcaC01g05431 Brassica carinata HOM05D002733 ORTHO05D003856 1.3e-13 80.9 153 32.7
Aa31LG8G17140 Aethionema arabicum HOM05D002733 ORTHO05D003856 1.7e-13 80.5 111 38.7
C03p26740 Brassica napus HOM05D002733 ORTHO05D003856 1.7e-13 80.5 153 32.7
BolC3t15059H Brassica oleracea HOM05D002733 ORTHO05D003856 1.7e-13 80.5 153 32.7
PSO566G0305 Papaver somniferum HOM05D002733 ORTHO05D003856 2.8e-13 79.7 105 37.1
Prupe.7G224100 Prunus persica HOM05D002733 ORTHO05D003856 4.9e-13 79.0 128 33.6
AL8G24310 Arabidopsis lyrata HOM05D002733 ORTHO05D003856 8.3e-13 78.2 112 40.2
BcaB02g09048 Brassica carinata HOM05D002733 ORTHO05D003856 8.3e-13 78.2 131 36.6
Aa31LG8G17200 Aethionema arabicum HOM05D002733 ORTHO05D003856 1.1e-12 77.8 105 39.0
BcaC02g12127 Brassica carinata HOM05D002733 ORTHO05D003856 1.1e-12 77.8 131 38.9
A05p06330 Brassica napus HOM05D002733 ORTHO05D003856 1.1e-12 77.8 131 38.9
C04p07280 Brassica napus HOM05D002733 ORTHO05D003856 1.1e-12 77.8 131 38.9
BolC4t22351H Brassica oleracea HOM05D002733 ORTHO05D003856 1.1e-12 77.8 131 38.9
Sp4g22050 Schrenkiella parvula HOM05D002733 ORTHO05D003856 1.1e-12 77.8 127 35.4
TPR.G22027 Trifolium pratense HOM05D002733 ORTHO05D003856 1.1e-12 77.8 97 41.2
Aa31LG7G1520 Aethionema arabicum HOM05D002733 ORTHO05D003856 1.4e-12 77.4 146 34.2
Peaxi162Scf00665g00139 Petunia axillaris HOM05D002733 ORTHO05D003856 1.8e-12 77.0 129 37.2
AL7G49890 Arabidopsis lyrata HOM05D002733 ORTHO05D003856 3.1e-12 76.3 112 38.4
Dinv41650 Davidia involucrata HOM05D002733 ORTHO05D003856 3.1e-12 76.3 97 43.3
BraA05t19601Z Brassica rapa HOM05D002733 ORTHO05D003856 7.0e-12 75.1 143 38.5
Aa31LG8G17210 Aethionema arabicum HOM05D002733 ORTHO05D003856 2.0e-11 73.6 104 38.5
Carub.0004s2232 Capsella rubella HOM05D002733 ORTHO05D003856 3.5e-11 72.8 131 35.1
Dinv07992 Davidia involucrata HOM05D002733 ORTHO05D003856 1.0e-10 71.2 98 42.9
THA.LOC104810048 Tarenaya hassleriana HOM05D002733 ORTHO05D003856 2.9e-10 69.7 132 29.5
Phvul.004G169500 Phaseolus vulgaris HOM05D022012 ORTHO05D003856 5.0e-10 68.9 120 35.0
MD02G1060300 Malus domestica HOM05D002733 ORTHO05D003856 6.6e-10 68.6 115 36.5
CARHR135120 Cardamine hirsuta HOM05D002733 ORTHO05D003856 8.6e-10 68.2 123 30.1
Carub.0003s2754 Capsella rubella HOM05D002733 ORTHO05D003856 1.1e-09 67.8 109 37.6
Aa31LG8G11380 Aethionema arabicum HOM05D002733 ORTHO05D003856 2.1e-08 63.5 132 34.8
FAN28G2808 Fragaria x ananassa HOM05D002733 ORTHO05D003856 2.8e-08 63.2 70 45.7
AT1G20600 Arabidopsis thaliana HOM05D002733 ORTHO05D003856 4.7e-08 62.4 80 42.5
Dinv26718 Davidia involucrata HOM05D002733 ORTHO05D003856 4.7e-08 62.4 88 39.8
COL.COLO4_00094 Corchorus olitorius HOM05D002733 ORTHO05D003856 1.0e-07 61.2 85 40.0
FAN19G0693 Fragaria x ananassa HOM05D002733 ORTHO05D003856 1.8e-07 60.5 68 41.2
ATR1159G057 Amborella trichopoda HOM05D020218 ORTHO05D013427 8.9e-07 58.2 117 34.2
FvH4_6g01440 Fragaria vesca HOM05D000896 ORTHO05D000594 2.6e-06 56.6 111 30.6
CARHR135110 Cardamine hirsuta HOM05D002733 ORTHO05D003856 3.4e-06 56.2 87 35.6


User provided reference genes

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