Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_00155 Corylus avellana HOM05D008167 ORTHO05D010296 2.2e-69 265.4 126 100.0
Cfa015915 Carpinus fangiana HOM05D008167 ORTHO05D010296 8.9e-58 226.9 112 97.3
Haze_24435 Corylus avellana HOM05D006271 ORTHO05D008237 2.6e-57 225.3 117 92.3
QL12p036142 Quercus lobata HOM05D008167 ORTHO05D010296 1.0e-50 203.4 112 84.8
CiPaw.05G235800 Carya illinoinensis HOM05D008167 ORTHO05D010296 3.4e-49 198.4 112 83.0
vmacro21234 Vaccinium macrocarpon HOM05D008167 ORTHO05D010296 4.6e-46 188.0 112 78.6
Atru.chr13.1254 Acer truncatum HOM05D008167 ORTHO05D010296 3.0e-45 185.3 112 74.1
Haze_17026 Corylus avellana HOM05D000028 ORTHO05D010296 5.0e-45 184.5 115 82.6
Dinv13035 Davidia involucrata HOM05D008167 ORTHO05D010296 5.0e-45 184.5 112 76.8
Nn1g05299 Nelumbo nucifera HOM05D008167 ORTHO05D010296 5.0e-45 184.5 112 73.2
Thecc.08G110600 Theobroma cacao HOM05D008167 ORTHO05D010296 1.1e-44 183.3 112 78.6
Actinidia10306 Actinidia chinensis HOM05D008167 ORTHO05D010296 1.5e-44 183.0 112 75.0
Gohir.A01G186400 Gossypium hirsutum HOM05D008167 ORTHO05D010296 1.5e-44 183.0 112 76.8
Gohir.D01G176900 Gossypium hirsutum HOM05D008167 ORTHO05D010296 2.5e-44 182.2 112 76.8
Duzib093G0044 Durio zibethinus HOM05D008167 ORTHO05D010296 3.3e-44 181.8 112 75.9
GSVIVG01009002001 Vitis vinifera HOM05D008167 ORTHO05D010296 3.3e-44 181.8 112 74.1
Aqoxy6G00583 Aquilegia oxysepala HOM05D008167 ORTHO05D010296 7.3e-44 180.6 112 74.1
Gorai.002G219300 Gossypium raimondii HOM05D008167 ORTHO05D010296 2.8e-43 178.7 112 75.9
CANSAT25G1054 Cannabis sativa HOM05D008167 ORTHO05D010296 1.4e-42 176.4 112 74.1
Prupe.1G513100 Prunus persica HOM05D008167 ORTHO05D010296 3.1e-42 175.3 112 71.4
Ciclev10001481m.g Citrus clementina HOM05D008167 ORTHO05D010296 5.2e-42 174.5 112 70.5
COL.COLO4_16444 Corchorus olitorius HOM05D008167 ORTHO05D010296 5.2e-42 174.5 112 73.2
Potri.002G093800 Populus trichocarpa HOM05D008167 ORTHO05D010296 5.2e-42 174.5 112 70.5
Cpa.g.sc66.82 Carica papaya HOM05D008167 ORTHO05D010296 6.8e-42 174.1 112 67.9
arahy.Tifrunner.gnm1.ann1.DD9M5F Arachis hypogaea HOM05D008167 ORTHO05D010296 1.2e-41 173.3 112 67.9
arahy.Tifrunner.gnm1.ann1.R32LA5 Arachis hypogaea HOM05D008167 ORTHO05D010296 1.2e-41 173.3 112 67.9
Lj3g0012000 Lotus japonicus HOM05D008167 ORTHO05D010296 1.2e-41 173.3 112 70.5
Manes.02G154800 Manihot esculenta HOM05D008167 ORTHO05D010296 2.0e-41 172.6 112 70.5
TAR628G0982 Trochodendron aralioides HOM05D008167 ORTHO05D010296 4.4e-41 171.4 111 69.4
Lj4C719T5 Lonicera japonica HOM05D008167 ORTHO05D010296 7.5e-41 170.6 112 69.6
PSO541G2703 Papaver somniferum HOM05D008167 ORTHO05D010296 9.8e-41 170.2 110 69.1
TWI56G0729 Tripterygium wilfordii HOM05D008167 ORTHO05D010296 9.8e-41 170.2 112 68.8
Lj4C716T9 Lonicera japonica HOM05D008167 ORTHO05D010296 2.2e-40 169.1 112 69.6
MD15G1365100 Malus domestica HOM05D008167 ORTHO05D010296 2.2e-40 169.1 112 69.6
PSO133G0102 Papaver somniferum HOM05D008167 ORTHO05D010296 6.4e-40 167.5 110 68.2
Haze_08650 Corylus avellana HOM05D008167 ORTHO05D010296 2.4e-39 165.6 82 93.9
MBI02_g36661_MAGBIO Magnolia biondii HOM05D008167 ORTHO05D010296 2.4e-39 165.6 112 67.9
FAN04G1438 Fragaria x ananassa HOM05D008167 ORTHO05D010296 7.1e-39 164.1 112 70.5
VMungo0331G0414 Vigna mungo HOM05D008167 ORTHO05D010296 9.2e-39 163.7 113 67.3
Medtr8g020400 Medicago truncatula HOM05D008167 ORTHO05D010296 2.1e-38 162.5 112 64.3
FvH4_5g37850 Fragaria vesca HOM05D008167 ORTHO05D010296 4.6e-38 161.4 112 68.8
FAN08G3120 Fragaria x ananassa HOM05D008167 ORTHO05D010296 4.6e-38 161.4 112 68.8
FAN18G0166 Fragaria x ananassa HOM05D008167 ORTHO05D010296 4.6e-38 161.4 112 68.8
Lsat_1_v5_gn_0_9700 Lactuca sativa HOM05D008167 ORTHO05D010296 6.0e-38 161.0 112 64.3
FAN13G0369 Fragaria x ananassa HOM05D008167 ORTHO05D010296 7.8e-38 160.6 112 68.8
RcHm_v2.0_Chr7g0239831 Rosa chinensis HOM05D008167 ORTHO05D010296 1.7e-37 159.5 112 67.0
Lalb_Chr01g0013571 Lupinus albus HOM05D008167 ORTHO05D010296 5.1e-37 157.9 112 62.5
ECA232G3852 Erigeron canadensis HOM05D008167 ORTHO05D010296 6.6e-37 157.5 112 63.4
HanXRQChr04g0111501 Helianthus annuus HOM05D008167 ORTHO05D010296 9.5e-36 153.7 125 56.8
Sabra02G0073900 Salix brachista HOM05D008167 ORTHO05D010296 2.1e-35 152.5 112 63.4
DCAR_008714 Daucus carota HOM05D008167 ORTHO05D010296 6.8e-34 147.5 111 63.1
TPR.G32489 Trifolium pratense HOM05D008167 ORTHO05D010296 9.9e-33 143.7 97 62.9
ATR0564G341 Amborella trichopoda HOM05D008167 ORTHO05D010296 1.3e-32 143.3 112 56.2
EL10Ac1g01257 Beta vulgaris HOM05D008167 ORTHO05D010296 2.2e-32 142.5 114 55.3
AUR62027724 Chenopodium quinoa HOM05D008167 ORTHO05D010296 2.9e-32 142.1 114 57.0
Os06g0222800 Oryza sativa ssp. japonica HOM05D008167 ORTHO05D010296 1.9e-31 139.4 111 55.0
Haze_15967 Corylus avellana HOM05D008167 ORTHO05D010296 5.1e-29 131.3 106 64.2
Glyma.16G006900 Glycine max HOM05D008167 ORTHO05D010296 7.3e-28 127.5 113 59.3
Ca_23370_v3 Cicer arietinum L. HOM05D008167 ORTHO05D010296 1.8e-26 122.9 83 63.9
SEGI_30626 Sequoiadendron giganteum HOM05D008167 ORTHO05D010296 5.2e-26 121.3 125 45.6
Psat4g183040 Pisum sativum HOM05D008167 ORTHO05D010296 3.4e-25 118.6 83 61.4
Eucgr.F02444 Eucalyptus grandis HOM05D008167 ORTHO05D010296 2.3e-21 105.9 88 58.0
Pp3c20_15640 Physcomitrium patens HOM05D008167 ORTHO05D010296 2.0e-09 66.2 93 37.6
Medtr8g020410 Medicago truncatula HOM05D008167 ORTHO05D010296 9.9e-09 63.9 49 49.0


User provided reference genes

Program Settings