Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_00103 Corylus avellana HOM05D004948 ORTHO05D005824 2.4e-125 452.2 233 100.0
Cfa016354 Carpinus fangiana HOM05D004948 ORTHO05D005824 1.1e-106 390.2 233 88.4
CiPaw.06G006800 Carya illinoinensis HOM05D004948 ORTHO05D005824 4.7e-89 331.6 235 75.3
Ciclev10005800m.g Citrus clementina HOM05D004948 ORTHO05D005824 4.0e-88 328.6 241 73.4
QL09p011186 Quercus lobata HOM05D004948 ORTHO05D005824 4.0e-88 328.6 234 74.8
Thecc.03G191700 Theobroma cacao HOM05D004948 ORTHO05D005824 1.3e-86 323.6 238 71.8
Duzib068G0205 Durio zibethinus HOM05D004948 ORTHO05D005824 6.4e-86 321.2 238 71.4
CANSAT21G0873 Cannabis sativa HOM05D004948 ORTHO05D005824 2.1e-84 316.2 238 69.3
COL.COLO4_04803 Corchorus olitorius HOM05D004948 ORTHO05D005824 2.1e-84 316.2 238 68.9
Cpa.g.sc3.41 Carica papaya HOM05D004948 ORTHO05D005824 7.8e-84 314.3 241 68.9
Manes.06G156200 Manihot esculenta HOM05D004948 ORTHO05D005824 6.6e-83 311.2 236 70.8
PGR083G1298 Punica granatum HOM05D004948 ORTHO05D005824 7.3e-82 307.8 239 70.7
Duzib205G0398 Durio zibethinus HOM05D004948 ORTHO05D005824 1.6e-81 306.6 238 68.9
GSVIVG01028728001 Vitis vinifera HOM05D004948 ORTHO05D005824 1.6e-81 306.6 238 69.7
Dinv28347 Davidia involucrata HOM05D004948 ORTHO05D005824 1.1e-80 303.9 240 67.1
Actinidia34187 Actinidia chinensis HOM05D004948 ORTHO05D005824 1.8e-80 303.1 235 68.1
Eucgr.A02670 Eucalyptus grandis HOM05D004948 ORTHO05D005824 4.0e-80 302.0 247 64.8
Atru.chr1.284 Acer truncatum HOM05D004948 ORTHO05D005824 1.5e-79 300.1 229 72.1
FAN10G0476 Fragaria x ananassa HOM05D004948 ORTHO05D005824 5.8e-79 298.1 237 67.1
vmacro06582 Vaccinium macrocarpon HOM05D004948 ORTHO05D005824 7.6e-79 297.7 248 66.1
FAN06G2108 Fragaria x ananassa HOM05D004948 ORTHO05D005824 1.3e-78 297.0 237 66.7
Potri.012G033100 Populus trichocarpa HOM05D004948 ORTHO05D005824 1.3e-78 297.0 240 67.9
ClCG01G000640 Citrullus lanatus HOM05D004948 ORTHO05D005824 1.7e-78 296.6 235 66.4
FAN01G0333 Fragaria x ananassa HOM05D004948 ORTHO05D005824 1.7e-78 296.6 237 66.7
FAN10G0469 Fragaria x ananassa HOM05D004948 ORTHO05D005824 1.7e-78 296.6 237 66.7
Hma1.2p1_0142F.1_g064080 Hydrangea macrophylla HOM05D004948 ORTHO05D005824 2.2e-78 296.2 245 64.5
PGR042G1790 Punica granatum HOM05D004948 ORTHO05D005824 3.8e-78 295.4 206 75.2
SalBow2G2244 Salvia bowleyana HOM05D004948 ORTHO05D005824 3.8e-78 295.4 238 66.4
Prupe.2G306200 Prunus persica HOM05D004948 ORTHO05D005824 6.4e-78 294.7 252 64.7
TAR636G2931 Trochodendron aralioides HOM05D004948 ORTHO05D005824 1.1e-77 293.9 240 66.2
FAN06G4897 Fragaria x ananassa HOM05D004948 ORTHO05D005824 1.4e-77 293.5 237 66.2
Lj1g0018821 Lotus japonicus HOM05D004948 ORTHO05D005824 1.4e-77 293.5 244 65.6
Potri.015G023400 Populus trichocarpa HOM05D004948 ORTHO05D005824 2.4e-77 292.7 235 68.5
arahy.Tifrunner.gnm1.ann1.LZU7FF Arachis hypogaea HOM05D004948 ORTHO05D005824 3.2e-77 292.4 209 70.3
SGA_v2.0_scaffold10G05268 Striga asiatica HOM05D004948 ORTHO05D005824 3.2e-77 292.4 231 68.8
TAR629G2953 Trochodendron aralioides HOM05D004948 ORTHO05D005824 4.1e-77 292.0 240 65.0
MSTRG.65 Avicennia marina HOM05D004948 ORTHO05D005824 5.4e-77 291.6 221 67.4
CsaV3_5G000730 Cucumis sativus L. HOM05D004948 ORTHO05D005824 1.6e-76 290.0 235 63.8
MELO3C005865.2 Cucumis melo HOM05D004948 ORTHO05D005824 2.7e-76 289.3 235 64.3
Sed0002242 Sechium edule HOM05D004948 ORTHO05D005824 3.5e-76 288.9 228 65.4
Dinv35301 Davidia involucrata HOM05D004948 ORTHO05D005824 6.0e-76 288.1 252 63.5
FvH4_7g30910 Fragaria vesca HOM05D004948 ORTHO05D005824 7.8e-76 287.7 245 64.1
MBI07_g20438_MAGBIO Magnolia biondii HOM05D004948 ORTHO05D005824 2.3e-75 286.2 235 66.8
Gohir.A12G252400 Gossypium hirsutum HOM05D004948 ORTHO05D005824 8.6e-75 284.3 223 65.5
Gorai.008G271400 Gossypium raimondii HOM05D004948 ORTHO05D005824 1.1e-74 283.9 223 65.5
MD01G1214200 Malus domestica HOM05D004948 ORTHO05D005824 1.1e-74 283.9 240 65.0
Gohir.D12G253100 Gossypium hirsutum HOM05D004948 ORTHO05D005824 2.5e-74 282.7 223 65.0
Rhsim03G0197700 Rhododendron simsii HOM05D004948 ORTHO05D005824 3.3e-74 282.3 235 65.5
Glyma.13G040600 Glycine max HOM05D004948 ORTHO05D005824 9.6e-74 280.8 221 68.3
PGSC0003DMG400009097 Solanum tuberosum HOM05D004948 ORTHO05D005824 1.2e-73 280.4 225 66.2
CAN.G108.18 Capsicum annuum HOM05D004948 ORTHO05D005824 2.1e-73 279.6 212 67.9
Migut.F01058 Erythranthe guttata HOM05D004948 ORTHO05D005824 2.1e-73 279.6 246 61.4
Duzib084G1367 Durio zibethinus HOM05D004948 ORTHO05D005824 3.6e-73 278.9 238 64.7
Aqoxy5G04108 Aquilegia oxysepala HOM05D004948 ORTHO05D005824 4.7e-73 278.5 233 64.8
MD07G1283800 Malus domestica HOM05D004948 ORTHO05D005824 8.1e-73 277.7 242 62.8
Solyc03g007480.3 Solanum lycopersicum HOM05D004948 ORTHO05D005824 2.4e-72 276.2 228 64.0
Sopen03g003430 Solanum pennellii HOM05D004948 ORTHO05D005824 2.4e-72 276.2 228 64.0
Peaxi162Scf00904g00460 Petunia axillaris HOM05D004948 ORTHO05D005824 2.6e-71 272.7 212 67.9
HanXRQChr13g0392981 Helianthus annuus HOM05D004948 ORTHO05D005824 3.4e-71 272.3 229 63.3
Oeu037114.1 Olea europaea HOM05D004948 ORTHO05D005824 1.3e-70 270.4 232 65.1
Sc19g0001090 Simmondsia chinensis HOM05D004948 ORTHO05D005824 8.4e-70 267.7 234 62.4
FAN03G1348 Fragaria x ananassa HOM05D004948 ORTHO05D005824 1.1e-69 267.3 237 62.4
Lalb_Chr04g0263671 Lupinus albus HOM05D004948 ORTHO05D005824 1.1e-69 267.3 215 65.6
Manes.14G019200 Manihot esculenta HOM05D004948 ORTHO05D005824 1.4e-69 266.9 219 64.8
Sabra12G0022300 Salix brachista HOM05D004948 ORTHO05D005824 2.7e-68 262.7 194 72.2
EL10Ac3g05356 Beta vulgaris HOM05D004948 ORTHO05D005824 4.6e-68 261.9 225 60.9
RcHm_v2.0_Chr1g0379991 Rosa chinensis HOM05D004948 ORTHO05D005824 4.6e-68 261.9 187 72.7
ECA233G3864 Erigeron canadensis HOM05D004948 ORTHO05D005824 7.8e-68 261.2 227 62.1
PGSC0003DMG400028892 Solanum tuberosum HOM05D004948 ORTHO05D005824 1.0e-67 260.8 234 59.4
AUR62031482 Chenopodium quinoa HOM05D004948 ORTHO05D005824 3.0e-67 259.2 225 58.7
AUR62021051 Chenopodium quinoa HOM05D004948 ORTHO05D005824 3.9e-67 258.8 225 59.1
ATR1132G055 Amborella trichopoda HOM05D004948 ORTHO05D005824 1.9e-66 256.5 200 64.5
TWI23G0483 Tripterygium wilfordii HOM05D004948 ORTHO05D005824 1.9e-66 256.5 186 72.0
Lsat_1_v5_gn_8_6120 Lactuca sativa HOM05D004948 ORTHO05D005824 2.5e-66 256.1 232 58.6
arahy.Tifrunner.gnm1.ann1.MD6354 Arachis hypogaea HOM05D004948 ORTHO05D005824 1.3e-65 253.8 163 75.5
Peaxi162Scf00618g00525 Petunia axillaris HOM05D004948 ORTHO05D005824 1.6e-65 253.4 233 59.2
Solyc06g051820.4 Solanum lycopersicum HOM05D004948 ORTHO05D005824 2.1e-65 253.1 235 58.3
Sopen06g017830 Solanum pennellii HOM05D004948 ORTHO05D005824 3.6e-65 252.3 229 58.5
DCAR_010636 Daucus carota HOM05D004948 ORTHO05D005824 4.8e-65 251.9 239 58.6
Lj3A912T42 Lonicera japonica HOM05D004948 ORTHO05D005824 8.1e-65 251.1 197 66.5
THA.LOC104800283 Tarenaya hassleriana HOM05D004948 ORTHO05D005824 6.9e-64 248.1 229 58.5
Aa31LG5G23580 Aethionema arabicum HOM05D004948 ORTHO05D005824 2.6e-63 246.1 225 59.1
Carub.0008s1349 Capsella rubella HOM05D004948 ORTHO05D005824 1.3e-62 243.8 235 56.6
Aa31sc29G60 Aethionema arabicum HOM05D004948 ORTHO05D005824 2.2e-62 243.0 225 59.1
Nitab4.5_0001331g0180 Nicotiana tabacum HOM05D004948 ORTHO05D005824 2.9e-62 242.7 180 70.0
AL8G28010 Arabidopsis lyrata HOM05D004948 ORTHO05D005824 8.4e-62 241.1 235 56.6
Nitab4.5_0000472g0200 Nicotiana tabacum HOM05D004948 ORTHO05D005824 1.1e-61 240.7 179 68.7
Nn2g13651 Nelumbo nucifera HOM05D004948 ORTHO05D005824 2.4e-61 239.6 188 66.5
Sp6g15460 Schrenkiella parvula HOM05D004948 ORTHO05D005824 2.4e-61 239.6 235 56.2
Thhalv10014692m.g Eutrema salsugineum HOM05D004948 ORTHO05D005824 4.2e-61 238.8 223 57.0
CARHR266350 Cardamine hirsuta HOM05D004948 ORTHO05D005824 7.9e-60 234.6 220 56.4
AT5G53310 Arabidopsis thaliana HOM05D004948 ORTHO05D005824 2.3e-59 233.0 224 56.2
BcaB05g22031 Brassica carinata HOM05D004948 ORTHO05D005824 2.3e-59 233.0 233 55.4
BcaC03g14431 Brassica carinata HOM05D004948 ORTHO05D005824 2.3e-59 233.0 227 55.1
C02p18470 Brassica napus HOM05D004948 ORTHO05D005824 2.3e-59 233.0 227 55.1
BolC2t07987H Brassica oleracea HOM05D004948 ORTHO05D005824 2.3e-59 233.0 227 55.1
Aa31LG3G9220 Aethionema arabicum HOM05D004948 ORTHO05D005824 3.0e-59 232.6 228 53.1
A02p11140 Brassica napus HOM05D004948 ORTHO05D005824 6.7e-59 231.5 227 54.2
BraA02t06177Z Brassica rapa HOM05D004948 ORTHO05D005824 6.7e-59 231.5 227 54.2
Hund27721 Selenicereus undatus HOM05D004948 ORTHO05D005824 1.5e-58 230.3 241 56.4
Hund27734 Selenicereus undatus HOM05D004948 ORTHO05D005824 1.5e-58 230.3 241 56.4
Actinidia31860 Actinidia chinensis HOM05D004948 ORTHO05D005824 1.6e-57 226.9 239 56.9
Gohir.A09G183400 Gossypium hirsutum HOM05D004948 ORTHO05D005824 1.2e-55 220.7 238 54.2
Gohir.D09G178100 Gossypium hirsutum HOM05D004948 ORTHO05D005824 1.5e-55 220.3 222 57.2
Gorai.006G200200 Gossypium raimondii HOM05D004948 ORTHO05D005824 1.5e-55 220.3 222 57.2
Lj1g0003063 Lotus japonicus HOM05D004948 ORTHO05D005824 2.6e-55 219.5 172 65.7
Os01g0621700 Oryza sativa ssp. japonica HOM05D004948 ORTHO05D005824 5.8e-55 218.4 232 50.4
Ca_16670_v3 Cicer arietinum L. HOM05D004948 ORTHO05D005824 1.1e-53 214.2 193 60.1
arahy.Tifrunner.gnm1.ann1.AMC2P5 Arachis hypogaea HOM05D004948 ORTHO05D005824 2.4e-53 213.0 172 62.2
Cc02_g01980 Coffea canephora HOM05D004948 ORTHO05D005824 9.3e-53 211.1 233 54.1
Glyma.04G238900 Glycine max HOM05D004948 ORTHO05D005824 1.2e-52 210.7 172 66.3
CAN.G204.5 Capsicum annuum HOM05D004948 ORTHO05D005824 7.9e-52 208.0 229 51.5
CDE04G0161 Ceratophyllum demersum HOM05D004948 ORTHO05D005824 1.3e-51 207.2 205 51.7
Glyma.06G124800 Glycine max HOM05D004948 ORTHO05D005824 1.3e-51 207.2 199 60.3
TPR.G33862 Trifolium pratense HOM05D004948 ORTHO05D005824 1.8e-51 206.8 172 61.6
arahy.Tifrunner.gnm1.ann1.NIM4HJ Arachis hypogaea HOM05D004948 ORTHO05D005824 2.3e-51 206.5 172 62.2
Psat0s97g0080 Pisum sativum HOM05D004948 ORTHO05D005824 6.7e-51 204.9 172 62.8
Phvul.009G135700 Phaseolus vulgaris HOM05D004948 ORTHO05D005824 8.7e-51 204.5 225 55.6
DCAR_008996 Daucus carota HOM05D002473 ORTHO05D005824 1.9e-50 203.4 189 58.2
Lalb_Chr08g0240671 Lupinus albus HOM05D004948 ORTHO05D005824 7.4e-50 201.4 172 63.4
TWI39G0355 Tripterygium wilfordii HOM05D004948 ORTHO05D005824 7.4e-50 201.4 152 69.7
HPP92_024433 Vanilla planifolia HOM05D004948 ORTHO05D005824 2.8e-49 199.5 170 59.4
VMungo1309G3087 Vigna mungo HOM05D004948 ORTHO05D005824 2.4e-48 196.4 198 53.5
unitig_747.g21853 Utricularia gibba HOM05D004948 ORTHO05D005824 6.9e-48 194.9 216 52.8
Mapoly0143s0028 Marchantia polymorpha HOM05D004948 ORTHO05D005824 9.0e-48 194.5 231 47.2
DCAR_014528 Daucus carota HOM05D000121 ORTHO05D005824 4.5e-47 192.2 170 57.1
Zm00001eb432120 Zea mays HOM05D004948 ORTHO05D005824 4.5e-47 192.2 164 60.4
Medtr3g090670 Medicago truncatula HOM05D004948 ORTHO05D005824 7.6e-47 191.4 162 61.7
Ah.07g206090 Amaranthus hybridus HOM05D004948 ORTHO05D005824 6.5e-46 188.3 151 64.2
SMO361G0401 Selaginella moellendorffii HOM05D004948 ORTHO05D005824 5.5e-45 185.3 211 49.3
Actinidia08617 Actinidia chinensis HOM05D004948 ORTHO05D005824 3.5e-44 182.6 159 64.8
Pp3c8_900 Physcomitrium patens HOM05D004948 ORTHO05D005824 3.5e-44 182.6 198 50.5
CSS0002011 Camellia sinensis var. sinensis HOM05D004948 ORTHO05D005824 1.8e-43 180.3 133 72.9
AagrBONN_evm.TU.Sc2ySwM_362.1882 Anthoceros agrestis HOM05D004948 ORTHO05D005824 7.4e-42 174.9 214 45.3
SHI54648 Sapria himalayana HOM05D004948 ORTHO05D005824 1.3e-41 174.1 208 51.4
SHI54754 Sapria himalayana HOM05D004948 ORTHO05D005824 1.3e-41 174.1 208 51.4
Nitab4.5_0002176g0030 Nicotiana tabacum HOM05D004948 ORTHO05D005824 2.2e-41 173.3 140 65.7
SEGI_09652 Sequoiadendron giganteum HOM05D004948 ORTHO05D005824 3.1e-40 169.5 152 59.2
CSS0025713 Camellia sinensis var. sinensis HOM05D004948 ORTHO05D005824 2.1e-36 156.8 105 75.2
CSS0008262 Camellia sinensis var. sinensis HOM05D004948 ORTHO05D005824 6.1e-36 155.2 105 74.3
BolC9t57186H Brassica oleracea HOM05D004948 ORTHO05D005824 8.7e-35 151.4 241 42.3
CBR_g39340 Chara braunii HOM05D004948 ORTHO05D005824 7.4e-34 148.3 172 45.9
BcaC04g20470 Brassica carinata HOM05D004948 ORTHO05D005824 1.7e-33 147.1 238 41.2
C09p43150 Brassica napus HOM05D004948 ORTHO05D005824 6.3e-33 145.2 231 42.0
Lj1P1012T60 Lonicera japonica HOM05D004948 ORTHO05D005824 1.0e-30 137.9 123 61.8
BcaB08g35692 Brassica carinata HOM05D004948 ORTHO05D005824 9.7e-26 121.3 87 65.5
Lalb_Chr23g0271431 Lupinus albus HOM05D004948 ORTHO05D005824 2.7e-20 103.2 198 37.9
MCO05G504 Micromonas commoda HOM05D004948 ORTHO05D005824 1.8e-16 90.5 136 36.0
CSS0007759 Camellia sinensis var. sinensis HOM05D004948 ORTHO05D005824 2.6e-15 86.7 88 55.7
CSS0011379 Camellia sinensis var. sinensis HOM05D004948 ORTHO05D005824 5.0e-14 82.4 91 48.4
CSS0022164 Camellia sinensis var. sinensis HOM05D004948 ORTHO05D005824 5.0e-14 82.4 91 48.4


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