Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_00093 Corylus avellana HOM05D006803 ORTHO05D008552 1.3e-76 289.7 145 100.0
CiPaw.05G259100 Carya illinoinensis HOM05D006803 ORTHO05D008552 2.1e-50 202.6 140 74.3
QL09p011586 Quercus lobata HOM05D006803 ORTHO05D008552 1.1e-43 180.3 144 70.8
Prupe.2G305500 Prunus persica HOM05D006803 ORTHO05D008552 1.6e-39 166.4 139 64.7
MD01G1213500 Malus domestica HOM05D006803 ORTHO05D008552 2.1e-39 166.0 141 64.5
Manes.14G019756 Manihot esculenta HOM05D006803 ORTHO05D008552 3.6e-39 165.2 142 65.5
Hma1.2p1_0327F.1_g126650 Hydrangea macrophylla HOM05D006803 ORTHO05D008552 6.2e-39 164.5 143 65.7
MELO3C006968.2 Cucumis melo HOM05D006803 ORTHO05D008552 8.1e-39 164.1 114 70.2
GSVIVG01028745001 Vitis vinifera HOM05D006803 ORTHO05D008552 1.8e-38 162.9 139 64.7
ClCG05G008590 Citrullus lanatus HOM05D006803 ORTHO05D008552 6.9e-38 161.0 114 70.2
Ciclev10006070m.g Citrus clementina HOM05D006803 ORTHO05D008552 2.6e-37 159.1 142 61.3
vmacro06587 Vaccinium macrocarpon HOM05D006803 ORTHO05D008552 4.5e-37 158.3 118 67.8
Cpa.g.sc3.33 Carica papaya HOM05D006803 ORTHO05D008552 5.8e-37 157.9 138 65.9
Sed0009140 Sechium edule HOM05D006803 ORTHO05D008552 9.9e-37 157.1 111 69.4
MD07G1283300 Malus domestica HOM05D006803 ORTHO05D008552 1.7e-36 156.4 96 79.2
COL.COLO4_07418 Corchorus olitorius HOM05D006803 ORTHO05D008552 2.9e-36 155.6 139 61.2
Atru.chr1.293 Acer truncatum HOM05D006803 ORTHO05D008552 3.8e-36 155.2 146 59.6
Gohir.D08G108400 Gossypium hirsutum HOM05D006803 ORTHO05D008552 1.1e-35 153.7 128 61.7
Gorai.004G116000 Gossypium raimondii HOM05D006803 ORTHO05D008552 1.1e-35 153.7 128 61.7
FAN06G1048 Fragaria x ananassa HOM05D006803 ORTHO05D008552 1.4e-35 153.3 139 59.7
FAN06G4527 Fragaria x ananassa HOM05D006803 ORTHO05D008552 1.4e-35 153.3 139 59.7
FAN01G0710 Fragaria x ananassa HOM05D006803 ORTHO05D008552 1.9e-35 152.9 139 60.4
RcHm_v2.0_Chr1g0379821 Rosa chinensis HOM05D006803 ORTHO05D008552 1.9e-35 152.9 139 61.9
FAN03G2299 Fragaria x ananassa HOM05D006803 ORTHO05D008552 5.4e-35 151.4 139 59.0
Actinidia34181 Actinidia chinensis HOM05D006803 ORTHO05D008552 7.1e-35 151.0 139 60.4
BcaB08g35659 Brassica carinata HOM05D006803 ORTHO05D008552 7.1e-35 151.0 87 81.6
Duzib084G0216 Durio zibethinus HOM05D006803 ORTHO05D008552 9.3e-35 150.6 139 61.2
C09p42680 Brassica napus HOM05D006803 ORTHO05D008552 1.2e-34 150.2 87 83.9
BolC9t57144H Brassica oleracea HOM05D006803 ORTHO05D008552 1.2e-34 150.2 87 83.9
A10p10450 Brassica napus HOM05D006803 ORTHO05D008552 1.6e-34 149.8 87 83.9
BraA10t43128Z Brassica rapa HOM05D006803 ORTHO05D008552 1.6e-34 149.8 87 83.9
FvH4_7g30800 Fragaria vesca HOM05D006803 ORTHO05D008552 1.6e-34 149.8 139 59.7
FAN10G2870 Fragaria x ananassa HOM05D006803 ORTHO05D008552 1.6e-34 149.8 139 59.0
Eucgr.K00316 Eucalyptus grandis HOM05D006803 ORTHO05D008552 2.1e-34 149.4 109 68.8
Potri.016G123100 Populus trichocarpa HOM05D006803 ORTHO05D008552 2.1e-34 149.4 120 65.8
Thhalv10014833m.g Eutrema salsugineum HOM05D006803 ORTHO05D008552 2.7e-34 149.1 136 62.5
Potri.012G033700 Populus trichocarpa HOM05D006803 ORTHO05D008552 2.7e-34 149.1 144 58.3
Sabra15G0018100 Salix brachista HOM05D006803 ORTHO05D008552 2.7e-34 149.1 142 61.3
Sp6g15120 Schrenkiella parvula HOM05D006803 ORTHO05D008552 2.7e-34 149.1 137 62.8
Nn1g01776 Nelumbo nucifera HOM05D006803 ORTHO05D008552 3.5e-34 148.7 141 58.9
Thecc.03G190700 Theobroma cacao HOM05D006803 ORTHO05D008552 4.6e-34 148.3 139 61.2
AT5G52960 Arabidopsis thaliana HOM05D006803 ORTHO05D008552 7.9e-34 147.5 87 82.8
Ca_19336_v3 Cicer arietinum L. HOM05D006803 ORTHO05D008552 1.0e-33 147.1 144 58.3
Dinv28351 Davidia involucrata HOM05D006803 ORTHO05D008552 1.3e-33 146.7 137 59.9
Migut.F00254 Erythranthe guttata HOM05D006803 ORTHO05D008552 1.8e-33 146.4 110 63.6
TWI14G0759 Tripterygium wilfordii HOM05D006803 ORTHO05D008552 2.3e-33 146.0 98 72.4
CARHR265930 Cardamine hirsuta HOM05D006803 ORTHO05D008552 3.9e-33 145.2 87 81.6
Duzib205G0804 Durio zibethinus HOM05D006803 ORTHO05D008552 3.9e-33 145.2 104 69.2
Glyma.09G125800 Glycine max HOM05D006803 ORTHO05D008552 3.9e-33 145.2 141 58.9
Gohir.A08G097600 Gossypium hirsutum HOM05D006803 ORTHO05D008552 3.9e-33 145.2 128 59.4
Sabra15G0020600 Salix brachista HOM05D006803 ORTHO05D008552 3.9e-33 145.2 142 59.9
THA.LOC104825126 Tarenaya hassleriana HOM05D006803 ORTHO05D008552 3.9e-33 145.2 139 60.4
PGSC0003DMG400009065 Solanum tuberosum HOM05D006803 ORTHO05D008552 5.1e-33 144.8 142 59.2
SalBow4G1856 Salvia bowleyana HOM05D006803 ORTHO05D008552 6.7e-33 144.4 139 58.3
SalBow4G1881 Salvia bowleyana HOM05D006803 ORTHO05D008552 6.7e-33 144.4 139 58.3
TAR333G0006 Trochodendron aralioides HOM05D006803 ORTHO05D008552 6.7e-33 144.4 139 61.2
Aa31LG3G9190 Aethionema arabicum HOM05D006803 ORTHO05D008552 8.7e-33 144.1 145 58.6
Eucgr.L03342 Eucalyptus grandis HOM05D006803 ORTHO05D008552 8.7e-33 144.1 109 67.0
AL8G27460 Arabidopsis lyrata HOM05D006803 ORTHO05D008552 1.1e-32 143.7 146 58.9
Sopen03g003500 Solanum pennellii HOM05D006803 ORTHO05D008552 1.1e-32 143.7 142 59.2
Carub.0008s1314 Capsella rubella HOM05D006803 ORTHO05D008552 1.5e-32 143.3 105 70.5
Sabra12G0022800 Salix brachista HOM05D006803 ORTHO05D008552 1.5e-32 143.3 121 63.6
SGA_v2.0_scaffold44G16771 Striga asiatica HOM05D006803 ORTHO05D008552 2.5e-32 142.5 112 63.4
Peaxi162Scf00904g00457 Petunia axillaris HOM05D006803 ORTHO05D008552 7.4e-32 141.0 139 55.4
Solyc03g007540.3 Solanum lycopersicum HOM05D006803 ORTHO05D008552 7.4e-32 141.0 142 58.5
arahy.Tifrunner.gnm1.ann1.GHK1U8 Arachis hypogaea HOM05D006803 ORTHO05D008552 1.6e-31 139.8 142 57.7
arahy.Tifrunner.gnm1.ann1.V6YLC6 Arachis hypogaea HOM05D006803 ORTHO05D008552 1.6e-31 139.8 142 57.7
Lj3C914T13 Lonicera japonica HOM05D006803 ORTHO05D008552 1.6e-31 139.8 114 64.9
Oeu044167.1 Olea europaea HOM05D006803 ORTHO05D008552 1.6e-31 139.8 139 55.4
Actinidia08612 Actinidia chinensis HOM05D006803 ORTHO05D008552 8.1e-31 137.5 139 56.1
EL10Ac3g05364 Beta vulgaris HOM05D006803 ORTHO05D008552 8.1e-31 137.5 131 55.7
unitig_37.g11977 Utricularia gibba HOM05D000211 ORTHO05D002285 8.1e-31 137.5 104 65.4
CAN.G108.11 Capsicum annuum HOM05D006803 ORTHO05D008552 2.4e-30 136.0 143 56.6
MBI06_g04289_MAGBIO Magnolia biondii HOM05D006803 ORTHO05D008552 2.4e-30 136.0 139 56.1
CANSAT21G0672 Cannabis sativa HOM05D006803 ORTHO05D008552 6.9e-30 134.4 65 90.8
TPR.G36689 Trifolium pratense HOM05D006803 ORTHO05D008552 1.2e-29 133.7 149 54.4
Phvul.004G101300 Phaseolus vulgaris HOM05D006803 ORTHO05D008552 2.0e-29 132.9 132 57.6
HanXRQChr09g0253111 Helianthus annuus HOM05D006803 ORTHO05D008552 2.6e-29 132.5 139 54.7
Lj2g0024519 Lotus japonicus HOM05D006803 ORTHO05D008552 2.6e-29 132.5 139 56.1
Sed0024434 Sechium edule HOM05D006803 ORTHO05D008552 2.6e-29 132.5 111 56.8
TWI39G0241 Tripterygium wilfordii HOM05D006803 ORTHO05D008552 4.5e-29 131.7 99 68.7
Hund11694 Selenicereus undatus HOM05D006803 ORTHO05D008552 5.8e-29 131.3 145 53.8
Sc19g0001080 Simmondsia chinensis HOM05D006803 ORTHO05D008552 5.8e-29 131.3 133 55.6
Lsat_1_v5_gn_9_57340 Lactuca sativa HOM05D006803 ORTHO05D008552 7.6e-29 131.0 79 68.4
Glyma.16G172700 Glycine max HOM05D006803 ORTHO05D008552 9.9e-29 130.6 140 52.1
Lalb_Chr01g0009661 Lupinus albus HOM05D006803 ORTHO05D008552 9.9e-29 130.6 148 50.0
Psat1g097000 Pisum sativum HOM05D006803 ORTHO05D008552 9.9e-29 130.6 143 53.8
VMungo0464G0281 Vigna mungo HOM05D006803 ORTHO05D008552 1.3e-28 130.2 133 57.1
Cc02_g02040 Coffea canephora HOM05D006803 ORTHO05D008552 6.4e-28 127.9 151 50.3
DCAR_014527 Daucus carota HOM05D006803 ORTHO05D008552 8.4e-28 127.5 110 59.1
PSO384G2893 Papaver somniferum HOM05D006803 ORTHO05D008552 1.1e-27 127.1 82 73.2
Rhsim03G0197200 Rhododendron simsii HOM05D006803 ORTHO05D008552 1.1e-27 127.1 117 56.4
CSS0034587 Camellia sinensis var. sinensis HOM05D006803 ORTHO05D008552 1.4e-27 126.7 143 48.3
Medtr6g034205 Medicago truncatula HOM05D006803 ORTHO05D008552 1.4e-27 126.7 140 52.1
PGR142G1334 Punica granatum HOM05D006803 ORTHO05D008552 1.4e-27 126.7 100 60.0
ATR0721G182 Amborella trichopoda HOM05D006803 ORTHO05D008552 1.9e-27 126.3 63 85.7
CDE03G0029 Ceratophyllum demersum HOM05D006803 ORTHO05D008552 2.4e-27 125.9 97 60.8
Aqoxy7G00212 Aquilegia oxysepala HOM05D006803 ORTHO05D008552 5.5e-27 124.8 146 52.1
SEGI_13941 Sequoiadendron giganteum HOM05D006803 ORTHO05D008552 5.5e-27 124.8 64 79.7
PSO135G0887 Papaver somniferum HOM05D006803 ORTHO05D008552 7.1e-27 124.4 140 51.4
Mapoly0006s0111 Marchantia polymorpha HOM05D006803 ORTHO05D008552 1.6e-26 123.2 63 77.8
CDE04G2534 Ceratophyllum demersum HOM05D006803 ORTHO05D008552 2.1e-26 122.9 64 79.7
Oeu059677.1 Olea europaea HOM05D006803 ORTHO05D008552 2.5e-24 115.9 96 60.4
Zm00001eb296320 Zea mays HOM05D006803 ORTHO05D008552 2.5e-24 115.9 71 71.8
Nitab4.5_0000472g0050 Nicotiana tabacum HOM05D006803 ORTHO05D008552 5.6e-24 114.8 123 56.1
Os05g0569200 Oryza sativa ssp. japonica HOM05D006803 ORTHO05D008552 5.6e-24 114.8 66 74.2
AagrBONN_evm.TU.Sc2ySwM_228.1351 Anthoceros agrestis HOM05D006803 ORTHO05D008552 3.7e-23 112.1 85 64.7
ECA232G4170 Erigeron canadensis HOM05D006803 ORTHO05D008552 1.4e-22 110.2 141 46.1
Nitab4.5_0001331g0090 Nicotiana tabacum HOM05D006803 ORTHO05D008552 2.4e-22 109.4 122 55.7
Oeu008094.1 Olea europaea HOM05D006803 ORTHO05D008552 1.2e-21 107.1 119 49.6
SMO169G0228 Selaginella moellendorffii HOM05D006803 ORTHO05D008552 1.5e-21 106.7 63 69.8
Oeu059693.1 Olea europaea HOM05D006803 ORTHO05D008552 2.9e-20 102.4 128 47.7
Pp3c4_26620 Physcomitrium patens HOM05D006803 ORTHO05D008552 1.4e-19 100.1 90 54.4
Pp3c26_8430 Physcomitrium patens HOM05D006803 ORTHO05D008552 1.0e-17 94.0 54 72.2
CBR_g9073 Chara braunii HOM05D006803 ORTHO05D008552 2.2e-15 86.3 79 54.4
HPP92_011456 Vanilla planifolia HOM05D006803 ORTHO05D008552 3.7e-07 58.9 31 74.2


User provided reference genes

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