Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_00041 Corylus avellana HOM05D008474 ORTHO05D010618 3.4e-283 977.6 486 100.0
Cfa016285 Carpinus fangiana HOM05D008474 ORTHO05D010618 7.2e-241 837.0 527 83.5
QL09p012938 Quercus lobata HOM05D008474 ORTHO05D010618 3.8e-189 665.2 524 68.3
GSVIVG01028865001 Vitis vinifera HOM05D008474 ORTHO05D010618 7.9e-163 577.8 442 66.5
TAR629G1446 Trochodendron aralioides HOM05D008474 ORTHO05D010618 1.3e-162 577.0 429 69.5
Hma1.2p1_0274F.1_g110160 Hydrangea macrophylla HOM05D008474 ORTHO05D010618 1.5e-161 573.5 430 69.5
Ciclev10004632m.g Citrus clementina HOM05D008474 ORTHO05D010618 9.6e-161 570.9 444 66.7
Dinv35251 Davidia involucrata HOM05D008474 ORTHO05D010618 1.6e-160 570.1 430 69.3
Thecc.03G184000 Theobroma cacao HOM05D008474 ORTHO05D010618 1.6e-160 570.1 442 65.6
Prupe.2G300700 Prunus persica HOM05D008474 ORTHO05D010618 2.1e-160 569.7 527 59.8
Actinidia08577 Actinidia chinensis HOM05D008474 ORTHO05D010618 5.9e-158 561.6 429 67.1
Nn1g01630 Nelumbo nucifera HOM05D008474 ORTHO05D010618 1.3e-149 533.9 430 62.6
Rhsim03G0190800 Rhododendron simsii HOM05D008474 ORTHO05D010618 5.0e-149 531.9 551 54.4
MD01G1208200 Malus domestica HOM05D008474 ORTHO05D010618 1.5e-145 520.4 409 67.0
COL.COLO4_10058 Corchorus olitorius HOM05D008474 ORTHO05D010618 5.7e-145 518.5 455 60.0
Aqoxy7G00240 Aquilegia oxysepala HOM05D008474 ORTHO05D010618 1.3e-144 517.3 430 61.9
Gohir.D11G011400 Gossypium hirsutum HOM05D008474 ORTHO05D010618 9.1e-143 511.1 429 61.5
Gohir.A11G012200 Gossypium hirsutum HOM05D008474 ORTHO05D010618 1.5e-142 510.4 429 61.3
Gorai.007G012800 Gossypium raimondii HOM05D008474 ORTHO05D010618 2.6e-142 509.6 429 61.5
Peaxi162Scf00444g00133 Petunia axillaris HOM05D008474 ORTHO05D010618 9.4e-140 501.1 426 61.0
Sopen03g003910 Solanum pennellii HOM05D008474 ORTHO05D010618 4.4e-137 492.3 429 59.7
Nitab4.5_0005503g0010 Nicotiana tabacum HOM05D008474 ORTHO05D010618 5.7e-137 491.9 429 59.9
Solyc03g007970.2 Solanum lycopersicum HOM05D008474 ORTHO05D010618 1.7e-136 490.3 429 59.4
PSO782G4550 Papaver somniferum HOM05D008474 ORTHO05D010618 8.2e-136 488.0 426 60.6
PSO478G4996 Papaver somniferum HOM05D008474 ORTHO05D010618 1.6e-134 483.8 439 59.0
Migut.F00294 Erythranthe guttata HOM05D008474 ORTHO05D010618 5.5e-132 475.3 453 56.5
PGSC0003DMG400010168 Solanum tuberosum HOM05D008474 ORTHO05D010618 5.2e-130 468.8 461 55.3
HPP92_002525 Vanilla planifolia HOM05D008474 ORTHO05D010618 4.5e-126 455.7 437 53.3
Nitab4.5_0000084g0480 Nicotiana tabacum HOM05D008474 ORTHO05D010618 1.4e-106 391.0 427 52.2
AagrBONN_evm.TU.Sc2ySwM_368.481 Anthoceros agrestis HOM05D008474 ORTHO05D010618 1.5e-105 387.5 440 48.9
Mapoly0106s0042 Marchantia polymorpha HOM05D008474 ORTHO05D010618 2.0e-102 377.1 453 45.7
Pp3c23_890 Physcomitrium patens HOM05D008474 ORTHO05D010618 9.2e-95 351.7 461 44.7
SMO343G0016 Selaginella moellendorffii HOM05D008474 ORTHO05D010618 5.6e-92 342.4 439 45.1
RcHm_v2.0_Chr1g0378261 Rosa chinensis HOM05D008474 ORTHO05D010618 4.4e-89 332.8 401 50.4
SMO367G0034 Selaginella moellendorffii HOM05D008474 ORTHO05D010618 2.4e-82 310.5 438 42.2
Atru.chr1.360 Acer truncatum HOM05D008474 ORTHO05D010618 7.3e-76 288.9 267 58.8
Cc02_g02390 Coffea canephora HOM05D008474 ORTHO05D010618 1.5e-73 281.2 287 55.4
Cpa.g.sc346.3 Carica papaya HOM05D008474 ORTHO05D010618 9.9e-73 278.5 174 78.2
PRCOL_00003060 Prasinoderma coloniale HOM05D008474 ORTHO05D010618 1.4e-71 274.6 483 38.7
CBR_g40775 Chara braunii HOM05D008474 ORTHO05D010618 1.3e-69 268.1 535 35.0
Oeu063688.1 Olea europaea HOM05D008474 ORTHO05D010618 3.4e-65 253.4 363 43.3
Atru.chr1.361 Acer truncatum HOM05D008474 ORTHO05D010618 6.5e-48 196.1 129 72.9
SEGI_30256 Sequoiadendron giganteum HOM05D008474 ORTHO05D010618 4.8e-43 179.9 168 54.8
Cpa.g.sc346.2 Carica papaya HOM05D008474 ORTHO05D010618 5.0e-40 169.9 102 81.4
Actinidia34157 Actinidia chinensis HOM05D008474 ORTHO05D010618 5.7e-36 156.4 202 48.0
Actinidia34156 Actinidia chinensis HOM05D008474 ORTHO05D010618 5.1e-29 133.3 93 68.8
MD07G1278800 Malus domestica HOM05D008474 ORTHO05D010618 5.1e-29 133.3 103 66.0
QL09p013305 Quercus lobata HOM05D004269 ORTHO05D010618 1.4e-23 115.2 203 39.4
SEGI_21289 Sequoiadendron giganteum HOM05D008474 ORTHO05D010618 1.4e-23 115.2 174 42.5
CAN.G126.42 Capsicum annuum HOM05D008474 ORTHO05D010618 2.7e-14 84.3 87 49.4
Oeu027874.1 Olea europaea HOM05D008474 ORTHO05D010618 2.7e-14 84.3 54 74.1
SEGI_24311 Sequoiadendron giganteum HOM05D008474 ORTHO05D010618 4.1e-10 70.5 86 44.2
QL09p013310 Quercus lobata HOM05D008474 ORTHO05D010618 1.2e-06 58.9 82 45.1


User provided reference genes

Program Settings