Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_00032 Corylus avellana HOM05D006494 ORTHO05D007787 4.3e-150 534.6 271 100.0
Cfa016278 Carpinus fangiana HOM05D006494 ORTHO05D007787 2.9e-138 495.4 271 94.8
QL09p013118 Quercus lobata HOM05D006494 ORTHO05D007787 1.4e-79 300.4 272 66.2
CiPaw.05G263300 Carya illinoinensis HOM05D006494 ORTHO05D007787 1.4e-68 263.8 244 64.3
TWI39G0535 Tripterygium wilfordii HOM05D006494 ORTHO05D007787 7.2e-57 224.9 268 52.2
Ciclev10005709m.g Citrus clementina HOM05D006494 ORTHO05D007787 2.0e-54 216.9 268 52.6
TWI23G1164 Tripterygium wilfordii HOM05D006494 ORTHO05D007787 2.0e-54 216.9 265 52.1
Cpa.g.sc107.95 Carica papaya HOM05D006494 ORTHO05D007787 1.0e-50 204.5 274 48.5
Dinv28397 Davidia involucrata HOM05D006494 ORTHO05D007787 5.0e-50 202.2 271 46.9
Thecc.03G182400 Theobroma cacao HOM05D006494 ORTHO05D007787 1.1e-49 201.1 273 47.6
Manes.06G151500 Manihot esculenta HOM05D006494 ORTHO05D007787 3.3e-49 199.5 269 50.2
Thecc.04G169800 Theobroma cacao HOM05D006494 ORTHO05D007787 7.3e-49 198.4 269 48.0
Manes.14G023400 Manihot esculenta HOM05D006494 ORTHO05D007787 2.6e-46 189.9 241 52.3
Eucgr.K00289 Eucalyptus grandis HOM05D006494 ORTHO05D007787 5.8e-46 188.7 271 47.2
TWI39G0536 Tripterygium wilfordii HOM05D006494 ORTHO05D007787 5.8e-46 188.7 266 45.5
Actinidia20864 Actinidia chinensis HOM05D006494 ORTHO05D007787 4.9e-45 185.7 273 46.5
Duzib268G1872 Durio zibethinus HOM05D006494 ORTHO05D007787 7.0e-44 181.8 266 45.5
Actinidia34147 Actinidia chinensis HOM05D006494 ORTHO05D007787 9.2e-44 181.4 272 45.2
Ciclev10030388m.g Citrus clementina HOM05D006494 ORTHO05D007787 1.2e-43 181.0 281 45.9
Hma1.2p1_0327F.1_g126290 Hydrangea macrophylla HOM05D006494 ORTHO05D007787 1.6e-43 180.6 269 46.5
Duzib151G1204 Durio zibethinus HOM05D006494 ORTHO05D007787 3.5e-43 179.5 267 43.8
Rhsim09G0199800 Rhododendron simsii HOM05D006494 ORTHO05D007787 6.0e-43 178.7 269 41.6
Gohir.A02G091800 Gossypium hirsutum HOM05D006494 ORTHO05D007787 3.9e-42 176.0 265 44.5
Rhsim09G0200100 Rhododendron simsii HOM05D006494 ORTHO05D007787 5.0e-42 175.6 269 42.0
vmacro09820 Vaccinium macrocarpon HOM05D006494 ORTHO05D007787 1.1e-41 174.5 266 41.0
Prupe.7G058200 Prunus persica HOM05D006494 ORTHO05D007787 1.9e-41 173.7 251 48.2
Gohir.D02G108900 Gossypium hirsutum HOM05D006494 ORTHO05D007787 4.3e-41 172.6 266 44.7
ClCG05G008270 Citrullus lanatus HOM05D006494 ORTHO05D007787 2.1e-40 170.2 267 42.3
Gorai.005G124800 Gossypium raimondii HOM05D006494 ORTHO05D007787 3.6e-40 169.5 266 44.4
COL.COLO4_28030 Corchorus olitorius HOM05D006494 ORTHO05D007787 1.1e-39 167.9 265 44.9
CsaV3_3G017370 Cucumis sativus L. HOM05D006494 ORTHO05D007787 5.8e-38 162.2 270 41.1
PGR142G1234 Punica granatum HOM05D006494 ORTHO05D007787 1.7e-37 160.6 283 43.8
Gohir.A10G141700 Gossypium hirsutum HOM05D006494 ORTHO05D007787 3.7e-37 159.5 266 41.4
Gorai.011G137900 Gossypium raimondii HOM05D006494 ORTHO05D007787 1.1e-36 157.9 266 41.0
vmacro06639 Vaccinium macrocarpon HOM05D006494 ORTHO05D007787 1.9e-36 157.1 255 42.7
Gohir.D10G124800 Gossypium hirsutum HOM05D006494 ORTHO05D007787 7.0e-36 155.2 266 40.2
MELO3C018639.2 Cucumis melo HOM05D006494 ORTHO05D007787 3.5e-35 152.9 271 39.1
Sed0015630 Sechium edule HOM05D006494 ORTHO05D007787 4.6e-35 152.5 267 40.4
TAR629G2733 Trochodendron aralioides HOM05D006494 ORTHO05D007787 1.7e-34 150.6 287 41.1
MD07G1041300 Malus domestica HOM05D006494 ORTHO05D007787 8.6e-34 148.3 270 40.7
Nitab4.5_0000084g0320 Nicotiana tabacum HOM05D006494 ORTHO05D007787 4.3e-33 146.0 277 41.5
VMungo0720G0554 Vigna mungo HOM05D006494 ORTHO05D007787 5.6e-33 145.6 277 42.2
MSTRG.8473 Avicennia marina HOM05D006494 ORTHO05D007787 1.2e-32 144.4 272 39.0
COL.COLO4_10079 Corchorus olitorius HOM05D006494 ORTHO05D007787 3.1e-31 139.8 270 41.1
CSS0049923 Camellia sinensis var. sinensis HOM05D006494 ORTHO05D007787 5.2e-31 139.0 267 39.7
Lalb_Chr02g0144041 Lupinus albus HOM05D006494 ORTHO05D007787 1.5e-30 137.5 273 40.3
Ca_10732_v3 Cicer arietinum L. HOM05D006494 ORTHO05D007787 2.0e-30 137.1 288 40.6
Migut.F01093 Erythranthe guttata HOM05D006494 ORTHO05D007787 3.4e-30 136.3 268 38.1
MD12G1079700 Malus domestica HOM05D006494 ORTHO05D007787 5.8e-30 135.6 276 39.5
Actinidia31832 Actinidia chinensis HOM05D006494 ORTHO05D007787 1.7e-29 134.0 218 46.3
MD14G1075900 Malus domestica HOM05D006494 ORTHO05D007787 1.7e-29 134.0 276 41.7
Phvul.007G073600 Phaseolus vulgaris HOM05D006494 ORTHO05D007787 1.7e-29 134.0 276 41.7
PGSC0003DMG400010122 Solanum tuberosum HOM05D006494 ORTHO05D007787 2.2e-29 133.7 272 39.3
Prupe.7G043900 Prunus persica HOM05D006494 ORTHO05D007787 4.9e-29 132.5 262 40.1
Glyma.10G231900 Glycine max HOM05D006494 ORTHO05D007787 8.3e-29 131.7 278 38.5
SalBow2G1868 Salvia bowleyana HOM05D006494 ORTHO05D007787 8.3e-29 131.7 270 39.6
SalBow2G2185 Salvia bowleyana HOM05D006494 ORTHO05D007787 8.3e-29 131.7 270 39.6
Lj5g0022841 Lotus japonicus HOM05D006494 ORTHO05D007787 1.1e-28 131.3 288 41.0
Sopen03g004010 Solanum pennellii HOM05D006494 ORTHO05D007787 2.4e-28 130.2 272 38.2
Lalb_Chr21g0305211 Lupinus albus HOM05D006494 ORTHO05D007787 7.1e-28 128.6 292 39.7
Actinidia08572 Actinidia chinensis HOM05D006494 ORTHO05D007787 9.2e-28 128.3 192 45.3
Peaxi162Scf00444g00014 Petunia axillaris HOM05D006494 ORTHO05D007787 6.0e-27 125.6 275 37.1
Sed0010736 Sechium edule HOM05D006494 ORTHO05D007787 6.6e-26 122.1 269 37.9
SGA_v2.0_scaffold10G05304 Striga asiatica HOM05D006494 ORTHO05D007787 1.5e-25 120.9 269 33.1
Glyma.20G162200 Glycine max HOM05D006494 ORTHO05D007787 1.9e-25 120.6 274 37.2
Potri.017G113501 Populus trichocarpa HOM05D006494 ORTHO05D007787 1.9e-25 120.6 228 39.0
Cc02_g02520 Coffea canephora HOM05D006494 ORTHO05D007787 2.5e-25 120.2 273 37.0
TPR.G26961 Trifolium pratense HOM05D006494 ORTHO05D007787 2.5e-25 120.2 275 37.5
RcHm_v2.0_Chr3g0482771 Rosa chinensis HOM05D006494 ORTHO05D007787 1.6e-24 117.5 268 37.3
Rhsim03G0190000 Rhododendron simsii HOM05D006494 ORTHO05D007787 6.2e-24 115.5 212 40.1
Sabra04G0078700 Salix brachista HOM05D006494 ORTHO05D007787 8.1e-24 115.2 240 38.3
CSS0030697 Camellia sinensis var. sinensis HOM05D006494 ORTHO05D007787 1.4e-23 114.4 171 46.2
Solyc03g025160.4 Solanum lycopersicum HOM05D006494 ORTHO05D007787 2.4e-23 113.6 187 42.8
Nn6g33336 Nelumbo nucifera HOM05D006494 ORTHO05D007787 3.1e-23 113.2 277 37.5
HanXRQChr09g0252471 Helianthus annuus HOM05D006494 ORTHO05D007787 2.6e-22 110.2 256 37.1
DCAR_020265 Daucus carota HOM05D006494 ORTHO05D007787 3.4e-22 109.8 219 40.2
Migut.F00309 Erythranthe guttata HOM05D006494 ORTHO05D007787 4.4e-22 109.4 271 34.3
Potri.004G101600 Populus trichocarpa HOM05D006494 ORTHO05D007787 4.4e-22 109.4 228 38.6
ECA232G1863 Erigeron canadensis HOM05D006494 ORTHO05D007787 9.9e-22 108.2 274 35.8
Oeu006795.1 Olea europaea HOM05D006494 ORTHO05D007787 1.7e-21 107.5 268 35.4
PGSC0003DMG400029922 Solanum tuberosum HOM05D006494 ORTHO05D007787 1.7e-21 107.5 254 34.6
RcHm_v2.0_Chr3g0482351 Rosa chinensis HOM05D006494 ORTHO05D007787 3.8e-21 106.3 269 37.2
arahy.Tifrunner.gnm1.ann1.HAQV4X Arachis hypogaea HOM05D006494 ORTHO05D007787 4.9e-21 105.9 269 38.3
Nitab4.5_0000572g0070 Nicotiana tabacum HOM05D006494 ORTHO05D007787 1.1e-20 104.8 252 36.1
arahy.Tifrunner.gnm1.ann1.J3K5XQ Arachis hypogaea HOM05D006494 ORTHO05D007787 7.1e-20 102.1 269 37.5
Oeu022606.1 Olea europaea HOM05D006494 ORTHO05D007787 3.5e-19 99.8 269 34.2
Peaxi162Scf00618g00753 Petunia axillaris HOM05D006494 ORTHO05D007787 1.3e-18 97.8 297 30.6
SHI13763 Sapria himalayana HOM05D000481 ORTHO05D003804 3.0e-18 96.7 217 39.2
FAN08G0782 Fragaria x ananassa HOM05D006494 ORTHO05D007787 1.9e-17 94.0 271 32.8
Lsat_1_v5_gn_9_57501 Lactuca sativa HOM05D006494 ORTHO05D007787 2.5e-17 93.6 266 35.3
ECA232G4003 Erigeron canadensis HOM05D006494 ORTHO05D007787 4.3e-17 92.8 249 36.5
Actinidia03131 Actinidia chinensis HOM05D006494 ORTHO05D007787 4.7e-16 89.4 117 47.0
Aqoxy3G03609 Aquilegia oxysepala HOM05D006748 ORTHO05D008553 8.1e-16 88.6 241 34.9
FvH4_5g32440 Fragaria vesca HOM05D006494 ORTHO05D007787 8.1e-16 88.6 268 31.7
FAN18G4076 Fragaria x ananassa HOM05D006494 ORTHO05D007787 1.1e-15 88.2 268 31.7
FAN13G0811 Fragaria x ananassa HOM05D006494 ORTHO05D007787 6.9e-15 85.5 268 31.3
FAN14G1471 Fragaria x ananassa HOM05D006494 ORTHO05D007787 1.5e-14 84.3 267 32.6
FvH4_6g37300 Fragaria vesca HOM05D006494 ORTHO05D007787 5.8e-14 82.4 269 33.1
FAN05G4065 Fragaria x ananassa HOM05D006494 ORTHO05D007787 3.8e-13 79.7 269 32.7
FAN02G3807 Fragaria x ananassa HOM05D006494 ORTHO05D007787 4.9e-13 79.3 267 32.2
Psat0s2528g0040 Pisum sativum HOM05D006494 ORTHO05D007787 5.4e-12 75.9 295 31.5
unitig_46.g18800 Utricularia gibba HOM05D006494 ORTHO05D007787 9.3e-12 75.1 221 33.0
CiPaw.12G091000 Carya illinoinensis HOM05D006494 ORTHO05D007787 2.1e-11 73.9 318 27.4
PSO478G4343 Papaver somniferum HOM05D006494 ORTHO05D007787 3.5e-11 73.2 220 33.6
RcHm_v2.0_Chr3g0486201 Rosa chinensis HOM05D006494 ORTHO05D007787 4.6e-11 72.8 268 31.3
PSO782G5664 Papaver somniferum HOM05D006494 ORTHO05D007787 3.0e-10 70.1 217 31.8
PSO063G3044 Papaver somniferum HOM05D006494 ORTHO05D007787 5.6e-09 65.9 223 31.4
COL.COLO4_10083 Corchorus olitorius HOM05D006494 ORTHO05D007787 2.1e-08 63.9 170 38.2
FAN14G4923 Fragaria x ananassa HOM05D006494 ORTHO05D007787 3.6e-08 63.2 251 29.9
FvH4_6g24000 Fragaria vesca HOM05D006494 ORTHO05D007787 6.2e-08 62.4 251 29.9
FAN05G2781 Fragaria x ananassa HOM05D000001 ORTHO05D009295 2.4e-07 60.5 269 29.4
PGSC0003DMG400017033 Solanum tuberosum HOM05D006494 ORTHO05D007787 4.0e-07 59.7 126 37.3
GSVIVG01034561001 Vitis vinifera HOM05D006494 ORTHO05D007787 6.9e-07 58.9 278 28.1
RcHm_v2.0_Chr3g0482721 Rosa chinensis HOM05D006494 ORTHO05D007787 9.0e-07 58.5 166 30.1
AUR62031402 Chenopodium quinoa HOM05D014004 ORTHO05D015823 1.2e-06 58.2 121 38.0
arahy.Tifrunner.gnm1.ann1.78PZ7R Arachis hypogaea HOM05D062081 ORTHO05D007787 1.5e-06 57.8 257 28.4
Sopen06g011990 Solanum pennellii HOM05D006494 ORTHO05D007787 2.6e-06 57.0 159 31.4
EL10Ac3g05438 Beta vulgaris HOM05D014004 ORTHO05D015823 3.4e-06 56.6 128 38.3
Lalb_Chr06g0164231 Lupinus albus HOM05D006494 ORTHO05D007787 5.8e-06 55.8 110 40.0


User provided reference genes

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