Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_00010 Corylus avellana HOM05D008240 ORTHO05D010333 1.9e-65 252.3 119 100.0
Dinv28418 Davidia involucrata HOM05D008240 ORTHO05D002863 3.9e-23 111.7 64 82.8
CiPaw.06G002300 Carya illinoinensis HOM05D008240 ORTHO05D010333 6.7e-23 110.9 64 84.4
Ciclev10006392m.g Citrus clementina HOM05D008240 ORTHO05D010333 1.1e-20 103.6 64 79.7
Manes.14G024900 Manihot esculenta HOM05D008240 ORTHO05D010333 1.1e-20 103.6 58 84.5
Manes.06G149600 Manihot esculenta HOM05D008240 ORTHO05D010333 9.0e-20 100.5 58 82.8
Thecc.03G179600 Theobroma cacao HOM05D008240 ORTHO05D010333 3.4e-19 98.6 58 81.0
COL.COLO4_03572 Corchorus olitorius HOM05D008240 ORTHO05D010333 4.5e-19 98.2 58 81.0
COL.COLO4_28004 Corchorus olitorius HOM05D008240 ORTHO05D010333 4.5e-19 98.2 58 81.0
Psat6g197280 Pisum sativum HOM05D008240 ORTHO05D010333 7.7e-19 97.4 58 79.3
Actinidia34129 Actinidia chinensis HOM05D000206 ORTHO05D002863 1.7e-18 96.3 69 69.6
Gorai.008G276000 Gossypium raimondii HOM05D008240 ORTHO05D010333 1.7e-18 96.3 58 79.3
Medtr1g100890 Medicago truncatula HOM05D008240 ORTHO05D010333 1.7e-18 96.3 62 74.2
vmacro06659 Vaccinium macrocarpon HOM05D000206 ORTHO05D002863 2.2e-18 95.9 64 73.4
Prupe.2G297100 Prunus persica HOM05D008240 ORTHO05D010333 3.8e-18 95.1 63 77.8
arahy.Tifrunner.gnm1.ann1.ES0TVM Arachis hypogaea HOM05D008240 ORTHO05D010333 5.0e-18 94.7 65 70.8
Glyma.12G005800 Glycine max HOM05D008240 ORTHO05D010333 5.0e-18 94.7 60 78.3
Gohir.A12G256400 Gossypium hirsutum HOM05D008240 ORTHO05D010333 6.5e-18 94.4 58 79.3
Hma1.2p1_0227F.1_g095850 Hydrangea macrophylla HOM05D008240 ORTHO05D010333 6.5e-18 94.4 58 75.9
Gohir.D12G257700 Gossypium hirsutum HOM05D008240 ORTHO05D010333 8.5e-18 94.0 58 79.3
Sc13g0008860 Simmondsia chinensis HOM05D008240 ORTHO05D010333 8.5e-18 94.0 79 59.5
Lalb_Chr21g0305111 Lupinus albus HOM05D008240 ORTHO05D010333 1.1e-17 93.6 56 80.4
VMungo1127G0785 Vigna mungo HOM05D008240 ORTHO05D010333 1.1e-17 93.6 59 78.0
Phvul.011G006600 Phaseolus vulgaris HOM05D008240 ORTHO05D010333 1.4e-17 93.2 59 78.0
arahy.Tifrunner.gnm1.ann1.MUHC0Z Arachis hypogaea HOM05D002671 ORTHO05D010333 1.9e-17 92.8 65 69.2
Nn6g33426 Nelumbo nucifera HOM05D008240 ORTHO05D010333 3.2e-17 92.0 63 66.7
Cpa.g.sc107.72 Carica papaya HOM05D008240 ORTHO05D010333 4.2e-17 91.7 55 78.2
CSS0023725 Camellia sinensis var. sinensis HOM05D008240 ORTHO05D010333 7.2e-17 90.9 61 77.0
RcHm_v2.0_Chr1g0377781 Rosa chinensis HOM05D008240 ORTHO05D010333 7.2e-17 90.9 63 69.8
TPR.G27012 Trifolium pratense HOM05D008240 ORTHO05D010333 7.2e-17 90.9 57 77.2
Sabra01G0148200 Salix brachista HOM05D008240 ORTHO05D010333 4.6e-16 88.2 59 71.2
Atru.chr1.425 Acer truncatum HOM05D008240 ORTHO05D010333 6.1e-16 87.8 63 71.4
EL10Ac3g05605 Beta vulgaris HOM05D008240 ORTHO05D010333 7.9e-16 87.4 53 77.4
EL10Ac3g05606 Beta vulgaris HOM05D008240 ORTHO05D010333 7.9e-16 87.4 53 77.4
Potri.001G178400 Populus trichocarpa HOM05D008240 ORTHO05D010333 1.0e-15 87.0 60 75.0
AUR62021162 Chenopodium quinoa HOM05D008240 ORTHO05D010333 1.4e-15 86.7 55 72.7
FvH4_7g29780 Fragaria vesca HOM05D008240 ORTHO05D010333 1.4e-15 86.7 58 70.7
Glyma.09G230900 Glycine max HOM05D008240 ORTHO05D010333 3.0e-15 85.5 60 71.7
ClCG10G005770 Citrullus lanatus HOM05D008240 ORTHO05D010333 6.7e-15 84.3 53 73.6
Oeu045392.1 Olea europaea HOM05D008240 ORTHO05D010333 8.8e-15 84.0 51 76.5
Lsat_1_v5_gn_9_55121 Lactuca sativa HOM05D008240 ORTHO05D010333 2.0e-14 82.8 59 66.1
MELO3C025428.2 Cucumis melo HOM05D008240 ORTHO05D010333 4.3e-14 81.6 53 73.6
CsaV3_3G005460 Cucumis sativus L. HOM05D008240 ORTHO05D010333 8.2e-13 77.4 53 69.8
GSVIVG01028913001 Vitis vinifera HOM05D008240 ORTHO05D010333 1.1e-12 77.0 45 80.0
DCAR_020258 Daucus carota HOM05D008240 ORTHO05D010333 1.4e-12 76.6 50 72.0
Sed0005066 Sechium edule HOM05D008240 ORTHO05D010333 1.4e-12 76.6 59 64.4
Carub.0005s1524 Capsella rubella HOM05D008240 ORTHO05D010333 1.5e-11 73.2 54 64.8
BraA06t24953Z Brassica rapa HOM05D008240 ORTHO05D010333 2.0e-11 72.8 50 66.0
CAN.G1175.10 Capsicum annuum HOM05D008240 ORTHO05D010333 2.0e-11 72.8 53 67.9
CARHR157860 Cardamine hirsuta HOM05D008240 ORTHO05D010333 2.6e-11 72.4 44 75.0
BolC8t50025H Brassica oleracea HOM05D008240 ORTHO05D010333 4.5e-11 71.6 50 64.0
Migut.F01103 Erythranthe guttata HOM05D008240 ORTHO05D010333 4.5e-11 71.6 63 55.6
Aqoxy7G00310 Aquilegia oxysepala HOM05D008240 ORTHO05D010333 5.9e-11 71.2 49 63.3
Peaxi162Scf00444g00412 Petunia axillaris HOM05D008240 ORTHO05D010333 5.9e-11 71.2 56 64.3
A06p18700 Brassica napus HOM05D002671 ORTHO05D010333 7.7e-11 70.9 59 57.6
Solyc03g025480.4 Solanum lycopersicum HOM05D008240 ORTHO05D010333 1.0e-10 70.5 59 61.0
Sopen03g004320 Solanum pennellii HOM05D008240 ORTHO05D010333 1.0e-10 70.5 59 61.0
Nitab4.5_0004439g0090 Nicotiana tabacum HOM05D008240 ORTHO05D010333 2.9e-10 68.9 50 62.0
PGSC0003DMG400015797 Solanum tuberosum HOM05D008240 ORTHO05D010333 2.9e-10 68.9 64 53.1
QL07p048914 Quercus lobata HOM05D008240 ORTHO05D010333 8.5e-10 67.4 39 79.5
Nitab4.5_0000885g0010 Nicotiana tabacum HOM05D011433 ORTHO05D010333 4.7e-08 61.6 53 54.7
Os07g0175200 Oryza sativa ssp. japonica HOM05D008240 ORTHO05D010333 1.4e-07 60.1 49 55.1
Pp3c4_4750 Physcomitrium patens HOM05D008240 ORTHO05D010333 6.7e-07 57.8 53 49.1
Nitab4.5_0000084g0100 Nicotiana tabacum HOM05D008240 ORTHO05D010333 8.8e-07 57.4 38 73.7
Ah.05g180620 Amaranthus hybridus HOM05D011433 ORTHO05D013366 1.5e-06 56.6 39 61.5
Mapoly0108s0016 Marchantia polymorpha HOM05D008240 ORTHO05D010333 1.5e-06 56.6 52 53.8


User provided reference genes

Program Settings