Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQMTg0579461 Helianthus annuus HOM05D008923 ORTHO05D011423 8.7e-69 263.5 128 100.0
Sopen00g002560 Solanum pennellii HOM05D008923 ORTHO05D011423 1.0e-61 240.0 126 92.1
Peaxi162Scf00651g00634 Petunia axillaris HOM05D008466 ORTHO05D010817 5.1e-61 237.7 126 91.3
FAN20G1591 Fragaria x ananassa HOM05D008923 ORTHO05D011423 7.4e-60 233.8 120 92.5
VMungo0565G0002 Vigna mungo HOM05D008923 ORTHO05D011423 9.0e-58 226.9 137 83.9
Nitab4.5_0014136g0010 Nicotiana tabacum HOM05D008466 ORTHO05D010817 1.2e-54 216.5 119 87.4
Nitab4.5_0000031g0180 Nicotiana tabacum HOM05D008466 ORTHO05D011423 2.8e-51 205.3 119 84.0
RhsimMtG0002900 Rhododendron simsii HOM05D008923 ORTHO05D011423 5.0e-48 194.5 108 89.8
Psat0s2778g0120 Pisum sativum HOM05D008923 ORTHO05D011423 3.3e-44 181.8 119 80.7
FvH4_c1g00520 Fragaria vesca HOM05D008923 ORTHO05D011423 2.2e-40 169.1 88 95.5
Nitab4.5_0008578g0050 Nicotiana tabacum HOM05D008466 ORTHO05D011423 2.1e-38 162.5 99 80.8
Ca_04597_v3 Cicer arietinum L. HOM05D008923 ORTHO05D013768 2.7e-38 162.2 112 76.8
Nitab4.5_0001952g0260 Nicotiana tabacum HOM05D008466 ORTHO05D010817 6.1e-38 161.0 92 84.8
SalBow1G1510 Salvia bowleyana HOM05D008923 ORTHO05D011423 3.4e-33 145.2 101 76.2
ATR0480G001 Amborella trichopoda HOM05D008923 ORTHO05D011423 1.0e-32 143.7 87 85.1
SGA_v2.0_scaffold477G52174 Striga asiatica HOM05D008923 ORTHO05D016904 1.4e-31 139.8 79 84.8
Gohir.D08G087750 Gossypium hirsutum HOM05D008923 ORTHO05D011423 1.8e-29 132.9 73 90.4
Gohir.D02G091950 Gossypium hirsutum HOM05D008923 ORTHO05D011423 1.3e-27 126.7 95 72.6
MBI08_g16748_MAGBIO Magnolia biondii HOM05D008923 ORTHO05D011423 1.8e-26 122.9 77 83.1
Gorai.005G103300 Gossypium raimondii HOM05D008923 ORTHO05D011423 3.1e-26 122.1 70 88.6
Nitab4.5_0001796g0310 Nicotiana tabacum HOM05D008923 ORTHO05D011423 4.1e-26 121.7 67 91.0
Actinidia34868 Actinidia chinensis HOM05D041439 ORTHO05D011423 2.5e-23 112.5 53 94.3
arahy.Tifrunner.gnm1.ann1.5L8EUV Arachis hypogaea HOM05D007099 ORTHO05D009081 9.4e-23 110.5 63 84.1
Nitab4.5_0000172g1700 Nicotiana tabacum HOM05D008466 ORTHO05D010817 1.6e-22 109.8 100 62.0
Nitab4.5_0010033g0120 Nicotiana tabacum HOM05D008466 ORTHO05D010817 1.0e-21 107.1 60 83.3
Nitab4.5_0000925g0080 Nicotiana tabacum HOM05D008923 ORTHO05D011423 1.8e-21 106.3 53 96.2
SHI26553 Sapria himalayana HOM05D008923 ORTHO05D011423 6.7e-21 104.4 66 81.8
Hund22926 Selenicereus undatus HOM05D002729 ORTHO05D003163 8.8e-21 104.0 66 78.8
Hma1.2p1_0335F.1_g128880 Hydrangea macrophylla HOM05D008923 ORTHO05D011423 1.3e-19 100.1 51 96.1
arahy.Tifrunner.gnm1.ann1.S21A07 Arachis hypogaea HOM05D008923 ORTHO05D011423 4.8e-19 98.2 64 75.0
GSVIVG01004963001 Vitis vinifera HOM05D008923 ORTHO05D011423 8.2e-19 97.4 52 92.3
ATMG00285 Arabidopsis thaliana HOM05D008466 ORTHO05D010817 3.1e-18 95.5 51 92.2
Nitab4.5_0000172g2090 Nicotiana tabacum HOM05D008466 ORTHO05D011423 9.1e-18 94.0 57 77.2
SHI54298 Sapria himalayana HOM05D008923 ORTHO05D011423 1.3e-16 90.1 51 88.2
SEGI_14764 Sequoiadendron giganteum HOM05D008466 ORTHO05D010817 1.1e-15 87.0 51 86.3
Nitab4.5_0002325g0090 Nicotiana tabacum HOM05D008466 ORTHO05D010817 4.7e-14 81.6 44 88.6
CAN.G993.35 Capsicum annuum HOM05D000924 ORTHO05D001209 4.0e-13 78.6 51 76.5
Gorai.001G167700 Gossypium raimondii HOM05D008466 ORTHO05D010817 2.8e-11 72.4 38 92.1
Nitab4.5_0000925g0100 Nicotiana tabacum HOM05D008466 ORTHO05D011423 4.8e-11 71.6 41 78.0
Lsat_1_v5_gn_2_129581 Lactuca sativa HOM05D000580 ORTHO05D011423 1.4e-10 70.1 38 86.8
Nitab4.5_0001796g0330 Nicotiana tabacum HOM05D008466 ORTHO05D010817 3.5e-09 65.5 34 82.4
Ca_26887_v3 Cicer arietinum L. HOM05D031740 ORTHO05D011423 9.4e-07 57.4 55 56.4
COL.COLO4_03971 Corchorus olitorius HOM05D041439 ORTHO05D044714 9.4e-07 57.4 24 91.7
COL.COLO4_04100 Corchorus olitorius HOM05D041439 ORTHO05D044714 9.4e-07 57.4 24 91.7


User provided reference genes

Program Settings