Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQMTg0579401 Helianthus annuus HOM05D005210 ORTHO05D010286 1.9e-65 252.3 119 100.0
EL10Ac6g14456 Beta vulgaris HOM05D005210 ORTHO05D010286 1.2e-59 233.0 118 94.1
AUR62042343 Chenopodium quinoa HOM05D005210 ORTHO05D010286 3.8e-58 228.0 116 94.8
HanXRQChr14g0460771 Helianthus annuus HOM05D005210 ORTHO05D010286 3.4e-51 204.9 98 99.0
Hma1.2p1_0066F.1_g036150 Hydrangea macrophylla HOM05D005210 ORTHO05D010286 4.2e-49 198.0 100 93.0
AUR62043906 Chenopodium quinoa HOM05D005210 ORTHO05D010286 6.6e-47 190.7 95 95.8
Lj2P1229T95 Lonicera japonica HOM05D005210 ORTHO05D010286 6.6e-47 190.7 97 92.8
Solyc00g025290.1 Solanum lycopersicum HOM05D005210 ORTHO05D010286 8.1e-45 183.7 97 89.7
PGSC0003DMG400041193 Solanum tuberosum HOM05D005210 ORTHO05D010286 8.1e-45 183.7 97 89.7
SalBow1G3053 Salvia bowleyana HOM05D005210 ORTHO05D010286 1.1e-41 173.3 92 92.4
CARHR283020 Cardamine hirsuta HOM05D005210 ORTHO05D010286 5.4e-41 171.0 97 85.6
ATMG00660 Arabidopsis thaliana HOM05D005210 ORTHO05D010286 7.1e-41 170.6 97 85.6
Nitab4.5_0009709g0010 Nicotiana tabacum HOM05D005210 ORTHO05D010286 4.8e-37 157.9 93 81.7
ClCG09G013030 Citrullus lanatus HOM05D005210 ORTHO05D010286 1.4e-36 156.4 88 86.4
BraSC48t46322Z Brassica rapa HOM05D005210 ORTHO05D010286 1.0e-34 150.2 121 67.8
Ah.10g028400 Amaranthus hybridus HOM05D005210 ORTHO05D010286 8.4e-34 147.1 77 90.9
RcHm_v2.0_Chr7g0235961 Rosa chinensis HOM05D005210 ORTHO05D010286 1.9e-33 146.0 83 86.7
RcHm_v2.0_MTg0499091 Rosa chinensis HOM05D005210 ORTHO05D010286 1.9e-33 146.0 83 86.7
CAN.G1.5 Capsicum annuum HOM05D005210 ORTHO05D010286 3.0e-31 138.7 90 75.6
Dinv06682 Davidia involucrata HOM05D005210 ORTHO05D010080 3.0e-31 138.7 72 90.3
Actinidia34888 Actinidia chinensis HOM05D005210 ORTHO05D010080 5.7e-30 134.4 75 86.7
Cfa021370 Carpinus fangiana HOM05D002864 ORTHO05D008485 6.2e-29 131.0 70 90.0
Peaxi162Scf00489g00022 Petunia axillaris HOM05D005210 ORTHO05D011782 1.2e-27 126.7 100 67.0
RhsimMtG0002800 Rhododendron simsii HOM05D002864 ORTHO05D008485 2.6e-27 125.6 69 85.5
Lsat_1_v5_gn_2_41741 Lactuca sativa HOM05D005210 ORTHO05D010286 3.4e-27 125.2 84 77.4
Lsat_1_v5_gn_5_16200 Lactuca sativa HOM05D005210 ORTHO05D010286 3.4e-27 125.2 84 77.4
Lsat_1_v5_gn_6_2961 Lactuca sativa HOM05D005210 ORTHO05D010286 3.4e-27 125.2 84 77.4
arahy.Tifrunner.gnm1.ann1.QPLA3G Arachis hypogaea HOM05D005210 ORTHO05D010080 7.6e-27 124.0 66 89.4
SabraMtG0001200 Salix brachista HOM05D005210 ORTHO05D010286 4.2e-25 118.2 63 90.5
FAN17G0417 Fragaria x ananassa HOM05D005210 ORTHO05D010286 6.1e-24 114.4 83 72.3
LjContig00439g0018526 Lotus japonicus HOM05D005210 ORTHO05D010286 6.1e-24 114.4 83 72.3
Manes.16G058078 Manihot esculenta HOM05D005210 ORTHO05D010286 5.9e-19 97.8 57 86.0
Lsat_1_v5_gn_5_16401 Lactuca sativa HOM05D005210 ORTHO05D010286 1.9e-17 92.8 70 71.4
Thhalv10023031m.g Eutrema salsugineum HOM05D005210 ORTHO05D010286 3.6e-16 88.6 97 50.5
MELO3C030616.2 Cucumis melo HOM05D005210 ORTHO05D010286 3.9e-15 85.1 53 81.1
CAN.G85.24 Capsicum annuum HOM05D005210 ORTHO05D010286 3.3e-14 82.0 45 86.7
Nitab4.5_0007225g0020 Nicotiana tabacum HOM05D005210 ORTHO05D010286 9.7e-14 80.5 49 79.6
Phvul.011G104800 Phaseolus vulgaris HOM05D005210 ORTHO05D010286 2.2e-13 79.3 49 77.6
Psat0s4951g0200 Pisum sativum HOM05D002965 ORTHO05D010812 3.4e-11 72.0 129 40.3
Sopen11g014320 Solanum pennellii HOM05D005210 ORTHO05D010286 5.0e-10 68.2 39 82.1
unitig_87.g27938 Utricularia gibba HOM05D005210 ORTHO05D010286 5.5e-09 64.7 37 89.2


User provided reference genes

Program Settings