Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr17g0570211 Helianthus annuus HOM05D000580 ORTHO05D001785 9.5e-49 196.4 93 100.0
HanXRQChr00c0394g0574571 Helianthus annuus HOM05D000580 ORTHO05D001785 1.3e-45 186.0 92 95.7
HanXRQChr00c0557g0575751 Helianthus annuus HOM05D000580 ORTHO05D001785 1.3e-45 186.0 92 95.7
HanXRQChr01g0020251 Helianthus annuus HOM05D000580 ORTHO05D001785 1.3e-45 186.0 92 95.7
HanXRQChr04g0127521 Helianthus annuus HOM05D000580 ORTHO05D001785 1.3e-45 186.0 92 95.7
HanXRQChr10g0284351 Helianthus annuus HOM05D000580 ORTHO05D001785 1.3e-45 186.0 92 95.7
HanXRQChr10g0318091 Helianthus annuus HOM05D000580 ORTHO05D001785 1.3e-45 186.0 92 95.7
HanXRQChr11g0326931 Helianthus annuus HOM05D000580 ORTHO05D001785 1.3e-45 186.0 92 95.7
HanXRQCPg0580151 Helianthus annuus HOM05D000580 ORTHO05D001785 1.3e-45 186.0 92 95.7
Potri.011G074600 Populus trichocarpa HOM05D000580 ORTHO05D001785 1.3e-45 186.0 92 95.7
HanXRQChr02g0052671 Helianthus annuus HOM05D000580 ORTHO05D001785 1.7e-45 185.7 92 94.6
C05p18880 Brassica napus HOM05D000580 ORTHO05D001785 2.9e-45 184.9 92 94.6
BolSC35t60666H Brassica oleracea HOM05D000580 ORTHO05D001785 2.9e-45 184.9 92 94.6
BolSC35t60733H Brassica oleracea HOM05D000580 ORTHO05D001785 2.9e-45 184.9 92 94.6
BolSC47t61078H Brassica oleracea HOM05D000580 ORTHO05D001785 2.9e-45 184.9 92 94.6
BraSC138t45556Z Brassica rapa HOM05D000580 ORTHO05D001785 2.9e-45 184.9 92 94.6
BraSC143t45634Z Brassica rapa HOM05D000580 ORTHO05D001785 2.9e-45 184.9 92 94.6
CARHR282220 Cardamine hirsuta HOM05D000580 ORTHO05D001785 2.9e-45 184.9 92 94.6
Solyc00g500158.1 Solanum lycopersicum HOM05D000580 ORTHO05D001785 4.9e-45 184.1 92 94.6
CAN.G1478.6 Capsicum annuum HOM05D000580 ORTHO05D001785 3.2e-44 181.4 92 93.5
CAN.G1595.5 Capsicum annuum HOM05D000580 ORTHO05D001785 3.2e-44 181.4 92 93.5
CAN.G307.12 Capsicum annuum HOM05D000580 ORTHO05D001785 3.2e-44 181.4 92 93.5
Migut.D01433 Erythranthe guttata HOM05D000580 ORTHO05D001785 3.2e-44 181.4 92 93.5
BNapus_Darmor_BZH_scaffold_253p00320 Brassica napus HOM05D000580 ORTHO05D001785 4.1e-44 181.0 88 95.5
Gohir.A03G137700 Gossypium hirsutum HOM05D000580 ORTHO05D001785 9.2e-44 179.9 92 93.5
HanXRQChr10g0303871 Helianthus annuus HOM05D000580 ORTHO05D001785 4.6e-43 177.6 89 94.4
HanXRQChr04g0094331 Helianthus annuus HOM05D000580 ORTHO05D001785 5.9e-43 177.2 87 95.4
CAN.G129.15 Capsicum annuum HOM05D000580 ORTHO05D001785 1.3e-42 176.0 92 91.3
HanXRQChr10g0283661 Helianthus annuus HOM05D000580 ORTHO05D001785 2.3e-42 175.3 86 95.3
HanXRQChr11g0345251 Helianthus annuus HOM05D000580 ORTHO05D001785 2.3e-42 175.3 92 91.3
CAN.G127.15 Capsicum annuum HOM05D000580 ORTHO05D001785 3.9e-42 174.5 92 89.1
CAN.G327.17 Capsicum annuum HOM05D000580 ORTHO05D001785 6.6e-42 173.7 92 90.2
BolSC29t60630H Brassica oleracea HOM05D000580 ORTHO05D001785 3.3e-41 171.4 83 95.2
CAN.G134.1 Capsicum annuum HOM05D000580 ORTHO05D001785 8.0e-40 166.8 92 89.1
Gohir.A02G022101 Gossypium hirsutum HOM05D000580 ORTHO05D001785 1.8e-39 165.6 82 96.3
LjContig00319g0017313 Lotus japonicus HOM05D000580 ORTHO05D001785 1.8e-39 165.6 81 96.3
LjContig00319g0022083 Lotus japonicus HOM05D000580 ORTHO05D001785 1.8e-39 165.6 81 96.3
Potri.013G088900 Populus trichocarpa HOM05D000580 ORTHO05D001785 3.1e-39 164.9 92 85.9
EL10As12g24033 Beta vulgaris HOM05D000580 ORTHO05D001785 4.0e-39 164.5 84 94.0
Hund04056 Selenicereus undatus HOM05D000580 ORTHO05D001785 5.2e-39 164.1 83 94.0
Hund08804 Selenicereus undatus HOM05D000580 ORTHO05D001785 5.2e-39 164.1 83 94.0
Hund12526 Selenicereus undatus HOM05D000580 ORTHO05D001785 5.2e-39 164.1 83 94.0
Hund19319 Selenicereus undatus HOM05D000580 ORTHO05D001785 5.2e-39 164.1 83 94.0
Hund26843 Selenicereus undatus HOM05D000580 ORTHO05D001785 5.2e-39 164.1 83 94.0
Hund27466 Selenicereus undatus HOM05D000580 ORTHO05D001785 5.2e-39 164.1 83 94.0
Hund27479 Selenicereus undatus HOM05D000580 ORTHO05D001785 5.2e-39 164.1 83 94.0
Hund27576 Selenicereus undatus HOM05D000580 ORTHO05D001785 5.2e-39 164.1 83 94.0
Hund27594 Selenicereus undatus HOM05D000580 ORTHO05D001785 5.2e-39 164.1 83 94.0
Hund27893 Selenicereus undatus HOM05D000580 ORTHO05D001785 5.2e-39 164.1 83 94.0
Hund27983 Selenicereus undatus HOM05D000580 ORTHO05D001785 5.2e-39 164.1 83 94.0
Hund28047 Selenicereus undatus HOM05D000580 ORTHO05D001785 5.2e-39 164.1 83 94.0
Hund28107 Selenicereus undatus HOM05D000580 ORTHO05D001785 5.2e-39 164.1 83 94.0
Hund28266 Selenicereus undatus HOM05D000580 ORTHO05D001785 5.2e-39 164.1 83 94.0
Hund28324 Selenicereus undatus HOM05D000580 ORTHO05D001785 5.2e-39 164.1 83 94.0
Hund28457 Selenicereus undatus HOM05D000580 ORTHO05D001785 5.2e-39 164.1 83 94.0
Hund28467 Selenicereus undatus HOM05D000580 ORTHO05D001785 5.2e-39 164.1 83 94.0
Hund28486 Selenicereus undatus HOM05D000580 ORTHO05D001785 5.2e-39 164.1 83 94.0
Hund28517 Selenicereus undatus HOM05D000580 ORTHO05D001785 5.2e-39 164.1 83 94.0
Hund28527 Selenicereus undatus HOM05D000580 ORTHO05D001785 5.2e-39 164.1 83 94.0
Hund28630 Selenicereus undatus HOM05D000580 ORTHO05D001785 5.2e-39 164.1 83 94.0
Hund28744 Selenicereus undatus HOM05D000580 ORTHO05D001785 5.2e-39 164.1 83 94.0
Hund28757 Selenicereus undatus HOM05D000580 ORTHO05D001785 5.2e-39 164.1 83 94.0
Hund28844 Selenicereus undatus HOM05D000580 ORTHO05D001785 5.2e-39 164.1 83 94.0
Hund28888 Selenicereus undatus HOM05D000580 ORTHO05D001785 5.2e-39 164.1 83 94.0
Hund29020 Selenicereus undatus HOM05D000580 ORTHO05D001785 5.2e-39 164.1 83 94.0
Hund29034 Selenicereus undatus HOM05D000580 ORTHO05D001785 5.2e-39 164.1 83 94.0
Hund29162 Selenicereus undatus HOM05D000580 ORTHO05D001785 5.2e-39 164.1 83 94.0
Hund29215 Selenicereus undatus HOM05D000580 ORTHO05D001785 5.2e-39 164.1 83 94.0
Hund29226 Selenicereus undatus HOM05D000580 ORTHO05D001785 5.2e-39 164.1 83 94.0
Hund29232 Selenicereus undatus HOM05D000580 ORTHO05D001785 5.2e-39 164.1 83 94.0
Hund29523 Selenicereus undatus HOM05D000580 ORTHO05D001785 5.2e-39 164.1 83 94.0
Hund29532 Selenicereus undatus HOM05D000580 ORTHO05D001785 5.2e-39 164.1 83 94.0
Hund29535 Selenicereus undatus HOM05D000580 ORTHO05D001785 5.2e-39 164.1 83 94.0
Hund29543 Selenicereus undatus HOM05D000580 ORTHO05D001785 5.2e-39 164.1 83 94.0
Hund29548 Selenicereus undatus HOM05D000580 ORTHO05D001785 5.2e-39 164.1 83 94.0
Hund29561 Selenicereus undatus HOM05D000580 ORTHO05D001785 5.2e-39 164.1 83 94.0
Hund29565 Selenicereus undatus HOM05D000580 ORTHO05D001785 5.2e-39 164.1 83 94.0
Hund29572 Selenicereus undatus HOM05D000580 ORTHO05D001785 5.2e-39 164.1 83 94.0
Hund29583 Selenicereus undatus HOM05D000580 ORTHO05D001785 5.2e-39 164.1 83 94.0
Hund29591 Selenicereus undatus HOM05D000580 ORTHO05D001785 5.2e-39 164.1 83 94.0
Hund29600 Selenicereus undatus HOM05D000580 ORTHO05D001785 5.2e-39 164.1 83 94.0
Hund29603 Selenicereus undatus HOM05D000580 ORTHO05D001785 5.2e-39 164.1 83 94.0
Hund29610 Selenicereus undatus HOM05D000580 ORTHO05D001785 5.2e-39 164.1 83 94.0
Hund29665 Selenicereus undatus HOM05D000580 ORTHO05D001785 5.2e-39 164.1 83 94.0
Hund29680 Selenicereus undatus HOM05D000580 ORTHO05D001785 5.2e-39 164.1 83 94.0
Hund29716 Selenicereus undatus HOM05D000580 ORTHO05D001785 5.2e-39 164.1 83 94.0
Hund29876 Selenicereus undatus HOM05D000580 ORTHO05D001785 5.2e-39 164.1 83 94.0
Hund29955 Selenicereus undatus HOM05D000580 ORTHO05D001785 5.2e-39 164.1 83 94.0
Hund30033 Selenicereus undatus HOM05D000580 ORTHO05D001785 5.2e-39 164.1 83 94.0
Hund30067 Selenicereus undatus HOM05D000580 ORTHO05D001785 5.2e-39 164.1 83 94.0
Hund30082 Selenicereus undatus HOM05D000580 ORTHO05D001785 5.2e-39 164.1 83 94.0
Hund30302 Selenicereus undatus HOM05D000580 ORTHO05D001785 5.2e-39 164.1 83 94.0
Hund30445 Selenicereus undatus HOM05D000580 ORTHO05D001785 5.2e-39 164.1 83 94.0
Hund30485 Selenicereus undatus HOM05D000580 ORTHO05D001785 5.2e-39 164.1 83 94.0
Hund30800 Selenicereus undatus HOM05D000580 ORTHO05D001785 5.2e-39 164.1 83 94.0
Gohir.1Z078400 Gossypium hirsutum HOM05D000580 ORTHO05D001785 6.8e-39 163.7 82 95.1
Gohir.A01G137760 Gossypium hirsutum HOM05D000580 ORTHO05D001785 6.8e-39 163.7 82 95.1
Gorai.009G350200 Gossypium raimondii HOM05D000580 ORTHO05D001785 6.8e-39 163.7 82 95.1
Hund15206 Selenicereus undatus HOM05D000580 ORTHO05D001785 2.0e-38 162.2 84 91.7
Gohir.D01G102086 Gossypium hirsutum HOM05D000580 ORTHO05D001785 3.4e-38 161.4 82 92.7
BraSC59t46574Z Brassica rapa HOM05D000580 ORTHO05D001785 4.4e-38 161.0 84 91.7
Gohir.A12G178675 Gossypium hirsutum HOM05D000580 ORTHO05D001785 2.9e-37 158.3 82 92.7
Carub.0006s2563 Capsella rubella HOM05D000580 ORTHO05D001785 1.1e-36 156.4 76 96.1
ATCG00730 Arabidopsis thaliana HOM05D000580 ORTHO05D001785 3.2e-36 154.8 76 94.7
DCAR_032516 Daucus carota HOM05D000580 ORTHO05D001785 3.2e-36 154.8 76 94.7
HanXRQChr13g0395721 Helianthus annuus HOM05D000580 ORTHO05D001785 3.2e-36 154.8 76 94.7
PSO548G0060 Papaver somniferum HOM05D000580 ORTHO05D001785 3.2e-36 154.8 76 94.7
PGR111G0048 Punica granatum HOM05D000580 ORTHO05D001785 4.1e-36 154.5 76 93.4
HanXRQChr02g0052531 Helianthus annuus HOM05D000580 ORTHO05D001785 5.4e-36 154.1 76 94.7
Duzib026G0003 Durio zibethinus HOM05D000580 ORTHO05D001362 7.0e-36 153.7 84 86.9
Duzib124G0006 Durio zibethinus HOM05D000580 ORTHO05D001362 7.0e-36 153.7 84 86.9
Duzib237G0002 Durio zibethinus HOM05D000580 ORTHO05D001362 7.0e-36 153.7 84 86.9
Duzib256G0004 Durio zibethinus HOM05D000580 ORTHO05D001362 7.0e-36 153.7 84 86.9
Gorai.007G064400 Gossypium raimondii HOM05D000580 ORTHO05D001785 2.7e-35 151.8 82 90.2
Nn002s41358 Nelumbo nucifera HOM05D000580 ORTHO05D001785 1.3e-34 149.4 73 95.9
AL2G20590 Arabidopsis lyrata HOM05D000580 ORTHO05D001785 2.8e-32 141.7 70 94.3
AL2G21690 Arabidopsis lyrata HOM05D000580 ORTHO05D001785 2.8e-32 141.7 70 94.3
MCO11G579 Micromonas commoda HOM05D000580 ORTHO05D001785 2.8e-32 141.7 74 87.8
Lalb_Chr18g0049341 Lupinus albus HOM05D000580 ORTHO05D001785 1.8e-31 139.0 93 76.3
BolSC49t61166H Brassica oleracea HOM05D000580 ORTHO05D001785 1.2e-30 136.3 67 95.5
Mapoly4043s0001 Marchantia polymorpha HOM05D000580 ORTHO05D001785 5.8e-30 134.0 68 91.2
Lj1P929T39 Lonicera japonica HOM05D000580 ORTHO05D001785 1.1e-28 129.8 70 87.1
SMO086G0045 Selaginella moellendorffii HOM05D000580 ORTHO05D001785 7.1e-28 127.1 87 72.4
CAN.G1185.3 Capsicum annuum HOM05D000580 ORTHO05D001785 1.6e-27 125.9 71 85.9
arahy.Tifrunner.gnm1.ann1.GZ00NU Arachis hypogaea HOM05D000580 ORTHO05D001785 3.9e-26 121.3 92 70.7
arahy.Tifrunner.gnm1.ann1.7X81Z4 Arachis hypogaea HOM05D000580 ORTHO05D001785 3.3e-25 118.2 92 69.6
BolC7t41712H Brassica oleracea HOM05D000580 ORTHO05D001785 3.3e-25 118.2 54 96.3
BolSC29t60606H Brassica oleracea HOM05D000580 ORTHO05D001785 9.5e-25 116.7 57 94.7
Gohir.A09G103750 Gossypium hirsutum HOM05D000580 ORTHO05D001785 9.5e-25 116.7 57 94.7
HanXRQChr15g0486551 Helianthus annuus HOM05D000580 ORTHO05D001785 9.5e-25 116.7 57 94.7
Lj2P1237T69 Lonicera japonica HOM05D000580 ORTHO05D001785 9.5e-25 116.7 57 94.7
Lj2P1239T124 Lonicera japonica HOM05D000580 ORTHO05D001785 9.5e-25 116.7 57 94.7
Hund28676 Selenicereus undatus HOM05D000580 ORTHO05D001785 9.5e-25 116.7 57 94.7
Solyc01g017430.1 Solanum lycopersicum HOM05D000580 ORTHO05D001785 2.8e-24 115.2 70 78.6
Eucgr.E04205 Eucalyptus grandis HOM05D000580 ORTHO05D001785 1.1e-23 113.2 57 93.0
Gohir.A12G178615 Gossypium hirsutum HOM05D000580 ORTHO05D001785 1.4e-23 112.8 57 93.0
Gohir.A12G178640 Gossypium hirsutum HOM05D000580 ORTHO05D001785 1.4e-23 112.8 57 93.0
Pp3c21_5670 Physcomitrium patens HOM05D000580 ORTHO05D001785 1.8e-23 112.5 57 91.2
Lsat_1_v5_gn_8_161300 Lactuca sativa HOM05D000580 ORTHO05D001785 3.1e-23 111.7 92 67.4
Glyma.15G114600 Glycine max HOM05D000580 ORTHO05D001785 4.0e-23 111.3 57 91.2
Solyc00g500028.1 Solanum lycopersicum HOM05D000580 ORTHO05D001785 5.2e-23 110.9 92 66.3
Psat5g206560 Pisum sativum HOM05D000580 ORTHO05D001785 9.9e-22 106.7 57 87.7
Lalb_Chr03g0039291 Lupinus albus HOM05D000580 ORTHO05D001785 6.4e-21 104.0 58 84.5
MELO3C000399.2 Cucumis melo HOM05D000580 ORTHO05D001785 2.1e-19 99.0 50 94.0
BraSC103t45481Z Brassica rapa HOM05D000580 ORTHO05D001785 6.0e-19 97.4 49 91.8
Gohir.D07G170866 Gossypium hirsutum HOM05D000580 ORTHO05D001785 5.1e-18 94.4 52 86.5
Migut.D01367 Erythranthe guttata HOM05D000580 ORTHO05D001785 2.8e-16 88.6 41 97.6
Hma1.2p1_0218F.1_g092740 Hydrangea macrophylla HOM05D000580 ORTHO05D001785 8.1e-16 87.0 92 56.5
HanXRQChr11g0321061 Helianthus annuus HOM05D000580 ORTHO05D001785 1.7e-13 79.3 42 92.9
Solyc03g122000.4 Solanum lycopersicum HOM05D000580 ORTHO05D001785 1.0e-10 70.1 49 73.5
LjContig00318g0018353 Lotus japonicus HOM05D000580 ORTHO05D001785 6.6e-10 67.4 36 91.7
Medtr2g021500 Medicago truncatula HOM05D000580 ORTHO05D001785 6.6e-10 67.4 52 63.5
Ciclev10003610m.g Citrus clementina HOM05D000580 ORTHO05D001785 1.5e-09 66.2 37 89.2
BolSC46t61017H Brassica oleracea HOM05D000580 ORTHO05D001785 2.5e-09 65.5 43 76.7
HanXRQChr05g0148481 Helianthus annuus HOM05D000580 ORTHO05D001785 2.5e-09 65.5 40 77.5
Psat6g110880 Pisum sativum HOM05D000580 ORTHO05D001785 2.5e-09 65.5 43 76.7
Hund29507 Selenicereus undatus HOM05D000580 ORTHO05D001785 9.6e-09 63.5 37 81.1
Solyc00g500073.1 Solanum lycopersicum HOM05D000580 ORTHO05D001785 1.6e-08 62.8 44 75.0
Ah.10g028960 Amaranthus hybridus HOM05D000580 ORTHO05D001785 2.1e-08 62.4 43 72.1
Hund27960 Selenicereus undatus HOM05D000580 ORTHO05D001785 2.1e-08 62.4 43 72.1
arahy.Tifrunner.gnm1.ann1.J8VLEJ Arachis hypogaea HOM05D000580 ORTHO05D001785 2.8e-08 62.0 34 85.3
arahy.Tifrunner.gnm1.ann1.I9279U Arachis hypogaea HOM05D000580 ORTHO05D001785 4.8e-08 61.2 40 77.5


User provided reference genes

Program Settings