Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr17g0570121 Helianthus annuus HOM05D001404 ORTHO05D009009 5.6e-112 407.5 193 100.0
HanXRQChr17g0570291 Helianthus annuus HOM05D001404 ORTHO05D009009 3.6e-42 175.6 82 97.6
ECA234G1431 Erigeron canadensis HOM05D001404 ORTHO05D002309 8.6e-28 127.9 82 70.7
Lsat_1_v5_gn_4_6141 Lactuca sativa HOM05D001404 ORTHO05D009009 1.5e-27 127.1 82 70.7
CSS0043132 Camellia sinensis var. sinensis HOM05D001404 ORTHO05D002309 1.9e-19 100.1 89 52.8
Oeu028546.1 Olea europaea HOM05D001404 ORTHO05D009009 2.5e-19 99.8 82 54.9
Rhsim12G0051800 Rhododendron simsii HOM05D001404 ORTHO05D009009 2.5e-19 99.8 89 52.8
vmacro01204 Vaccinium macrocarpon HOM05D001404 ORTHO05D009009 4.3e-19 99.0 82 54.9
Duzib268G0371 Durio zibethinus HOM05D001404 ORTHO05D009009 5.6e-19 98.6 89 50.6
Manes.01G195300 Manihot esculenta HOM05D001404 ORTHO05D009009 5.6e-19 98.6 82 51.2
Actinidia08188 Actinidia chinensis HOM05D001404 ORTHO05D009009 1.2e-18 97.4 82 54.9
Thecc.02G239700 Theobroma cacao HOM05D001404 ORTHO05D009009 1.2e-18 97.4 82 52.4
CiPaw.05G145400 Carya illinoinensis HOM05D001404 ORTHO05D009009 1.6e-18 97.1 82 50.0
SalBow2G3155 Salvia bowleyana HOM05D001404 ORTHO05D009009 2.8e-18 96.3 82 50.0
QL03p067270 Quercus lobata HOM05D001404 ORTHO05D009009 4.7e-18 95.5 82 52.4
CAN.G159.8 Capsicum annuum HOM05D001404 ORTHO05D009009 8.1e-18 94.7 85 54.1
GSVIVG01020147001 Vitis vinifera HOM05D001404 ORTHO05D009009 8.1e-18 94.7 82 50.0
Cc11_g14260 Coffea canephora HOM05D001404 ORTHO05D009009 1.1e-17 94.4 82 56.1
THA.LOC104822951 Tarenaya hassleriana HOM05D001404 ORTHO05D009009 1.1e-17 94.4 82 52.4
Nn4g22934 Nelumbo nucifera HOM05D001404 ORTHO05D009009 1.4e-17 94.0 82 52.4
MD16G1084700 Malus domestica HOM05D001404 ORTHO05D009009 1.8e-17 93.6 82 51.2
Sabra10G0028400 Salix brachista HOM05D001404 ORTHO05D009009 1.8e-17 93.6 85 49.4
Ciclev10031837m.g Citrus clementina HOM05D001404 ORTHO05D009009 3.1e-17 92.8 82 51.2
Peaxi162Scf00828g00020 Petunia axillaris HOM05D001404 ORTHO05D009009 3.1e-17 92.8 82 50.0
PGR119G0405 Punica granatum HOM05D001404 ORTHO05D009009 3.1e-17 92.8 82 50.0
Gohir.A03G143500 Gossypium hirsutum HOM05D001404 ORTHO05D009009 8.9e-17 91.3 82 51.2
TWI36G0457 Tripterygium wilfordii HOM05D001404 ORTHO05D009009 8.9e-17 91.3 82 50.0
COL.COLO4_36283 Corchorus olitorius HOM05D001404 ORTHO05D002309 1.5e-16 90.5 82 51.2
Potri.010G037600 Populus trichocarpa HOM05D001404 ORTHO05D009009 1.5e-16 90.5 82 51.2
Sopen05g002340 Solanum pennellii HOM05D001404 ORTHO05D009009 1.5e-16 90.5 82 51.2
PGSC0003DMG401022613 Solanum tuberosum HOM05D001404 ORTHO05D009009 1.5e-16 90.5 82 50.0
Nitab4.5_0003602g0020 Nicotiana tabacum HOM05D001404 ORTHO05D009009 2.0e-16 90.1 82 51.2
Solyc05g006410.3 Solanum lycopersicum HOM05D001404 ORTHO05D009009 2.6e-16 89.7 88 48.9
Gorai.005G187100 Gossypium raimondii HOM05D001404 ORTHO05D009009 3.4e-16 89.4 82 51.2
MSTRG.7858 Avicennia marina HOM05D001404 ORTHO05D009009 4.4e-16 89.0 84 51.2
Nitab4.5_0002312g0090 Nicotiana tabacum HOM05D001404 ORTHO05D009009 4.4e-16 89.0 82 50.0
Migut.L01385 Erythranthe guttata HOM05D001404 ORTHO05D009009 5.8e-16 88.6 86 52.3
Gohir.D02G166800 Gossypium hirsutum HOM05D001404 ORTHO05D009009 7.5e-16 88.2 82 50.0
unitig_749.g13260 Utricularia gibba HOM05D001404 ORTHO05D009009 7.5e-16 88.2 82 45.1
Lalb_Chr05g0217271 Lupinus albus HOM05D001404 ORTHO05D009009 9.8e-16 87.8 82 47.6
Psat2g112600 Pisum sativum HOM05D001404 ORTHO05D009009 9.8e-16 87.8 82 50.0
Prupe.1G261400 Prunus persica HOM05D001404 ORTHO05D009009 9.8e-16 87.8 82 47.6
Eucgr.B02570 Eucalyptus grandis HOM05D001404 ORTHO05D009009 1.3e-15 87.4 82 47.6
PSO161G0115 Papaver somniferum HOM05D001404 ORTHO05D009009 1.3e-15 87.4 98 42.9
Cpa.g.sc1960.1 Carica papaya HOM05D001404 ORTHO05D009009 1.7e-15 87.0 89 44.9
SalBow2G0480 Salvia bowleyana HOM05D001404 ORTHO05D009009 1.7e-15 87.0 83 47.0
CDE10G0936 Ceratophyllum demersum HOM05D001404 ORTHO05D009009 2.2e-15 86.7 82 50.0
FAN12G1952 Fragaria x ananassa HOM05D001404 ORTHO05D009009 3.7e-15 85.9 82 52.4
Medtr5g036470 Medicago truncatula HOM05D001404 ORTHO05D009009 3.7e-15 85.9 84 51.2
SHI05275 Sapria himalayana HOM05D001404 ORTHO05D009009 3.7e-15 85.9 81 50.6
Sc14g0008480 Simmondsia chinensis HOM05D001355 ORTHO05D003368 4.9e-15 85.5 82 51.2
Sed0021588 Sechium edule HOM05D001404 ORTHO05D009009 6.4e-15 85.1 81 46.9
RcHm_v2.0_Chr4g0444821 Rosa chinensis HOM05D001404 ORTHO05D009009 8.3e-15 84.7 82 46.3
AUR62026309 Chenopodium quinoa HOM05D001404 ORTHO05D009009 1.1e-14 84.3 82 46.3
FAN07G0845 Fragaria x ananassa HOM05D001404 ORTHO05D009009 1.4e-14 84.0 82 51.2
FAN22G1682 Fragaria x ananassa HOM05D001404 ORTHO05D009009 1.4e-14 84.0 82 51.2
FAN17G2278 Fragaria x ananassa HOM05D001404 ORTHO05D009009 3.2e-14 82.8 82 46.3
Glyma.02G027500 Glycine max HOM05D001404 ORTHO05D009009 3.2e-14 82.8 82 46.3
CsaV3_5G031930 Cucumis sativus L. HOM05D001404 ORTHO05D009009 4.1e-14 82.4 81 44.4
CARHR063240 Cardamine hirsuta HOM05D001404 ORTHO05D002309 7.1e-14 81.6 82 48.8
Lj2g0007192 Lotus japonicus HOM05D001404 ORTHO05D009009 7.1e-14 81.6 82 46.3
VMungo1215G3058 Vigna mungo HOM05D001404 ORTHO05D009009 7.1e-14 81.6 82 46.3
Ca_24163_v3 Cicer arietinum L. HOM05D001404 ORTHO05D002309 1.2e-13 80.9 82 45.1
TAR374G0908 Trochodendron aralioides HOM05D001404 ORTHO05D009009 1.2e-13 80.9 83 42.2
EL10Ac6g13111 Beta vulgaris HOM05D001404 ORTHO05D009009 2.1e-13 80.1 82 46.3
Glyma.01G037400 Glycine max HOM05D001404 ORTHO05D009009 2.1e-13 80.1 82 45.1
TPR.G17319 Trifolium pratense HOM05D001404 ORTHO05D009009 4.6e-13 79.0 82 45.1
HPP92_002468 Vanilla planifolia HOM05D001404 ORTHO05D009009 4.6e-13 79.0 82 45.1
Hund25295 Selenicereus undatus HOM05D001404 ORTHO05D009009 6.0e-13 78.6 86 44.2
AT1G70150 Arabidopsis thaliana HOM05D001404 ORTHO05D009009 7.8e-13 78.2 82 46.3
Sp5g25260 Schrenkiella parvula HOM05D001404 ORTHO05D009009 7.8e-13 78.2 82 45.1
Aa31LG4G10750 Aethionema arabicum HOM05D001404 ORTHO05D009009 1.0e-12 77.8 85 44.7
FvH4_4g35220 Fragaria vesca HOM05D001404 ORTHO05D009009 1.0e-12 77.8 88 48.9
Os07g0481000 Oryza sativa ssp. japonica HOM05D001404 ORTHO05D009009 1.0e-12 77.8 83 47.0
Thhalv10018717m.g Eutrema salsugineum HOM05D001404 ORTHO05D009009 1.3e-12 77.4 82 46.3
ATR0712G045 Amborella trichopoda HOM05D001404 ORTHO05D009009 1.7e-12 77.0 82 42.7
ClCG05G024960 Citrullus lanatus HOM05D001404 ORTHO05D009009 1.7e-12 77.0 81 42.0
SalBow2G3257 Salvia bowleyana HOM05D001404 ORTHO05D009009 1.7e-12 77.0 82 43.9
AL2G29430 Arabidopsis lyrata HOM05D001404 ORTHO05D009009 3.0e-12 76.3 82 47.6
arahy.Tifrunner.gnm1.ann1.2TJ8DU Arachis hypogaea HOM05D001404 ORTHO05D009009 6.6e-12 75.1 86 40.7
arahy.Tifrunner.gnm1.ann1.VUK41S Arachis hypogaea HOM05D001404 ORTHO05D009009 6.6e-12 75.1 86 40.7
BraA07t31231Z Brassica rapa HOM05D001404 ORTHO05D009009 6.6e-12 75.1 83 45.8
A07p36630 Brassica napus HOM05D001404 ORTHO05D009009 1.1e-11 74.3 83 44.6
BcaC08g46464 Brassica carinata HOM05D001404 ORTHO05D009009 1.5e-11 73.9 83 44.6
CANSAT01G0136 Cannabis sativa HOM05D001404 ORTHO05D009009 1.5e-11 73.9 83 43.4
Aqoxy3G00874 Aquilegia oxysepala HOM05D001404 ORTHO05D009009 1.9e-11 73.6 82 41.5
C06p44030 Brassica napus HOM05D001404 ORTHO05D009009 1.9e-11 73.6 88 43.2
BolC6t39476H Brassica oleracea HOM05D001404 ORTHO05D009009 1.9e-11 73.6 88 43.2
Carub.0002s1684 Capsella rubella HOM05D001404 ORTHO05D009009 1.9e-11 73.6 82 43.9
SGA_v2.0_scaffold8G04270 Striga asiatica HOM05D001404 ORTHO05D009009 2.5e-11 73.2 107 37.4
AagrBONN_evm.TU.Sc2ySwM_368.625 Anthoceros agrestis HOM05D001404 ORTHO05D009009 7.3e-11 71.6 89 39.3
Mapoly0056s0134 Marchantia polymorpha HOM05D001404 ORTHO05D009009 1.4e-09 67.4 108 34.3
Haze_12124 Corylus avellana HOM05D001404 ORTHO05D002309 4.0e-09 65.9 82 42.7
SEGI_39493 Sequoiadendron giganteum HOM05D001404 ORTHO05D009009 1.5e-08 63.9 88 39.8
Lj6A799T78 Lonicera japonica HOM05D001404 ORTHO05D009009 2.6e-08 63.2 79 40.5
Pp3c9_21180 Physcomitrium patens HOM05D001404 ORTHO05D009009 1.7e-07 60.5 92 35.9
SMO238G0008 Selaginella moellendorffii HOM05D001404 ORTHO05D009009 1.7e-07 60.5 98 37.8
SMO091G0008 Selaginella moellendorffii HOM05D001404 ORTHO05D009009 4.9e-07 58.9 98 35.7
Medtr5g036455 Medicago truncatula HOM05D001404 ORTHO05D009009 3.2e-06 56.2 70 40.0


User provided reference genes

Program Settings