Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr17g0569721 Helianthus annuus HOM05D007371 ORTHO05D009319 5.9e-98 360.9 190 100.0
HanXRQChr00c0289g0573141 Helianthus annuus HOM05D007371 ORTHO05D009319 5.2e-78 294.7 162 96.9
HanXRQChr02g0059721 Helianthus annuus HOM05D007371 ORTHO05D009319 5.2e-78 294.7 162 96.9
HanXRQChr09g0258501 Helianthus annuus HOM05D007371 ORTHO05D009319 5.2e-78 294.7 162 96.9
HanXRQChr15g0465431 Helianthus annuus HOM05D007371 ORTHO05D009319 5.2e-78 294.7 162 96.9
HanXRQChr15g0465461 Helianthus annuus HOM05D007371 ORTHO05D009319 5.2e-78 294.7 162 96.9
HanXRQChr17g0569751 Helianthus annuus HOM05D007371 ORTHO05D009319 5.2e-78 294.7 162 96.9
HanXRQCPg0580341 Helianthus annuus HOM05D007371 ORTHO05D009319 5.2e-78 294.7 162 96.9
DCAR_032539 Daucus carota HOM05D007371 ORTHO05D009319 7.3e-72 274.2 162 88.9
Gohir.1Z049431 Gossypium hirsutum HOM05D007371 ORTHO05D009319 1.5e-69 266.5 162 86.4
Gohir.1Z049679 Gossypium hirsutum HOM05D007371 ORTHO05D009319 1.5e-69 266.5 162 86.4
Gohir.A02G134600 Gossypium hirsutum HOM05D007371 ORTHO05D009319 1.5e-69 266.5 162 86.4
Nn064s42209 Nelumbo nucifera HOM05D007371 ORTHO05D009319 4.4e-69 265.0 162 86.4
PGR111G0032 Punica granatum HOM05D007371 ORTHO05D009319 5.8e-69 264.6 162 86.4
CAN.G1526.6 Capsicum annuum HOM05D007371 ORTHO05D009319 7.6e-69 264.2 162 85.8
CAN.G278.2 Capsicum annuum HOM05D007371 ORTHO05D009319 7.6e-69 264.2 162 85.8
CAN.G939.5 Capsicum annuum HOM05D007371 ORTHO05D009319 7.6e-69 264.2 162 85.8
Lj9P89T22 Lonicera japonica HOM05D007371 ORTHO05D009319 7.6e-69 264.2 162 86.4
Migut.D01251 Erythranthe guttata HOM05D007371 ORTHO05D009319 9.9e-69 263.8 162 84.6
Lj2P1238T112 Lonicera japonica HOM05D007371 ORTHO05D009319 9.9e-69 263.8 162 86.4
Lju5009P0T52 Lonicera japonica HOM05D007371 ORTHO05D009319 9.9e-69 263.8 162 86.4
Gohir.A09G046246 Gossypium hirsutum HOM05D007371 ORTHO05D009319 3.7e-68 261.9 162 85.2
SalBow1G7973 Salvia bowleyana HOM05D007371 ORTHO05D009319 4.9e-68 261.5 162 84.0
Nn3g20215 Nelumbo nucifera HOM05D007371 ORTHO05D009319 1.4e-67 260.0 162 85.2
RcHm_v2.0_Chr5g0017201 Rosa chinensis HOM05D007371 ORTHO05D009319 5.4e-67 258.1 162 84.0
RcHm_v2.0_CPg0502761 Rosa chinensis HOM05D007371 ORTHO05D009319 5.4e-67 258.1 162 84.0
PSO548G0046 Papaver somniferum HOM05D007371 ORTHO05D009319 7.1e-67 257.7 162 82.7
RcHm_v2.0_Chr5g0043021 Rosa chinensis HOM05D007371 ORTHO05D009319 3.5e-66 255.4 162 83.3
Lalb_Chr07g0191781 Lupinus albus HOM05D007371 ORTHO05D009319 1.3e-65 253.4 162 82.7
Medtr4g006110 Medicago truncatula HOM05D007371 ORTHO05D009319 3.9e-65 251.9 161 82.0
CAN.G965.5 Capsicum annuum HOM05D007371 ORTHO05D009319 5.1e-65 251.5 162 81.5
C09p24650 Brassica napus HOM05D007371 ORTHO05D009319 8.6e-65 250.8 162 81.5
C09p40180 Brassica napus HOM05D007371 ORTHO05D009319 8.6e-65 250.8 162 81.5
BolC2t10597H Brassica oleracea HOM05D007371 ORTHO05D009319 8.6e-65 250.8 162 81.5
BolSC29t60507H Brassica oleracea HOM05D007371 ORTHO05D009319 8.6e-65 250.8 162 81.5
BolSC29t60622H Brassica oleracea HOM05D007371 ORTHO05D009319 8.6e-65 250.8 162 81.5
BolSC37t60794H Brassica oleracea HOM05D007371 ORTHO05D009319 8.6e-65 250.8 162 81.5
BolSC47t61064H Brassica oleracea HOM05D007371 ORTHO05D009319 8.6e-65 250.8 162 81.5
BraA10t43431Z Brassica rapa HOM05D007371 ORTHO05D009319 8.6e-65 250.8 162 81.5
BraSC103t45430Z Brassica rapa HOM05D007371 ORTHO05D009319 8.6e-65 250.8 162 81.5
BraSC179t45773Z Brassica rapa HOM05D007371 ORTHO05D009319 8.6e-65 250.8 162 81.5
BraSC59t46552Z Brassica rapa HOM05D007371 ORTHO05D009319 8.6e-65 250.8 162 81.5
Medtr7g021710 Medicago truncatula HOM05D007371 ORTHO05D009319 1.5e-64 250.0 161 81.4
CARHR282450 Cardamine hirsuta HOM05D007371 ORTHO05D009319 2.5e-64 249.2 162 80.9
Medtr6g042220 Medicago truncatula HOM05D007371 ORTHO05D009319 2.5e-64 249.2 162 81.5
TAR625G0296 Trochodendron aralioides HOM05D007371 ORTHO05D009319 2.5e-64 249.2 162 81.5
ATCG01080 Arabidopsis thaliana HOM05D007371 ORTHO05D009319 3.3e-64 248.8 162 80.2
AL9U11956 Arabidopsis lyrata HOM05D007371 ORTHO05D009319 7.3e-64 247.7 162 80.2
Solyc03g013600.1 Solanum lycopersicum HOM05D007371 ORTHO05D009319 7.3e-64 247.7 168 80.4
Peaxi162Scf00338g00628 Petunia axillaris HOM05D007371 ORTHO05D009319 1.4e-62 243.4 162 81.5
Gohir.D12G089301 Gossypium hirsutum HOM05D007371 ORTHO05D009319 2.4e-62 242.7 152 83.6
BolC9t56922H Brassica oleracea HOM05D007371 ORTHO05D009319 5.8e-61 238.0 168 76.2
Medtr5g063410 Medicago truncatula HOM05D007371 ORTHO05D009319 2.9e-60 235.7 161 78.9
Solyc02g011770.1 Solanum lycopersicum HOM05D007371 ORTHO05D009319 1.1e-59 233.8 162 77.2
Gohir.D04G175100 Gossypium hirsutum HOM05D007371 ORTHO05D009319 2.1e-58 229.6 138 84.8
Nn1g08633 Nelumbo nucifera HOM05D007371 ORTHO05D009319 1.1e-56 223.8 138 82.6
Solyc07g026910.3 Solanum lycopersicum HOM05D007371 ORTHO05D009319 6.2e-55 218.0 136 82.4
Gohir.D06G133700 Gossypium hirsutum HOM05D007371 ORTHO05D009319 9.9e-53 210.7 160 73.1
Glyma.19G081000 Glycine max HOM05D007371 ORTHO05D009319 3.9e-49 198.7 131 79.4
HanXRQChr00c0336g0573671 Helianthus annuus HOM05D007371 ORTHO05D009319 5.6e-48 194.9 99 100.0
CAN.G256.22 Capsicum annuum HOM05D007371 ORTHO05D009319 5.3e-46 188.3 126 77.8
Gohir.A03G146201 Gossypium hirsutum HOM05D007371 ORTHO05D009319 1.9e-43 179.9 170 60.0
Medtr0002s0160 Medicago truncatula HOM05D000533 ORTHO05D006151 2.4e-43 179.5 117 76.1
Nn031s41614 Nelumbo nucifera HOM05D007371 ORTHO05D009319 1.8e-41 173.3 99 85.9
Thecc.08G131100 Theobroma cacao HOM05D007371 ORTHO05D009319 4.3e-40 168.7 99 84.8
BolSC35t60705H Brassica oleracea HOM05D007371 ORTHO05D009319 2.4e-38 162.9 99 80.8
BraSC143t45659Z Brassica rapa HOM05D007371 ORTHO05D009319 2.6e-37 159.5 109 78.0
Potri.013G075100 Populus trichocarpa HOM05D007371 ORTHO05D009319 4.9e-36 155.2 106 73.6
HanXRQChr05g0152451 Helianthus annuus HOM05D007371 ORTHO05D009319 6.5e-36 154.8 74 100.0
HanXRQChr08g0211951 Helianthus annuus HOM05D007371 ORTHO05D009319 6.5e-36 154.8 74 100.0
BraSC25t45911Z Brassica rapa HOM05D007371 ORTHO05D009319 8.4e-36 154.5 93 80.6
Gorai.013G109900 Gossypium raimondii HOM05D007371 ORTHO05D009319 3.2e-35 152.5 98 79.6
C09p40330 Brassica napus HOM05D007371 ORTHO05D009319 2.1e-34 149.8 100 78.0
CAN.G262.7 Capsicum annuum HOM05D007371 ORTHO05D009319 3.5e-34 149.1 102 77.5
Gorai.005G189900 Gossypium raimondii HOM05D007371 ORTHO05D009319 4.3e-32 142.1 94 73.4
C02p24280 Brassica napus HOM05D007371 ORTHO05D009319 5.7e-32 141.7 131 59.5
BolSC45t60908H Brassica oleracea HOM05D007371 ORTHO05D009319 5.7e-32 141.7 93 79.6
BolSC29t60547H Brassica oleracea HOM05D007371 ORTHO05D009319 2.8e-31 139.4 92 79.3
BolSC35t60691H Brassica oleracea HOM05D007371 ORTHO05D009319 2.8e-31 139.4 92 79.3
BolSC46t60957H Brassica oleracea HOM05D007371 ORTHO05D009319 2.8e-31 139.4 92 79.3
BolSC56t61236H Brassica oleracea HOM05D007371 ORTHO05D009319 2.8e-31 139.4 92 79.3
HanXRQChr01g0000251 Helianthus annuus HOM05D007371 ORTHO05D009319 4.1e-30 135.6 138 63.8
Gohir.D02G169550 Gossypium hirsutum HOM05D007371 ORTHO05D009319 2.6e-29 132.9 96 68.8
Gohir.D07G194033 Gossypium hirsutum HOM05D007371 ORTHO05D009319 1.3e-28 130.6 76 86.8
Hma1.2p1_0656F.1_g196806 Hydrangea macrophylla HOM05D007371 ORTHO05D009319 1.7e-28 130.2 81 86.4
HanXRQChr11g0323761 Helianthus annuus HOM05D007371 ORTHO05D009319 2.5e-27 126.3 103 70.9
BraSC58t46462Z Brassica rapa HOM05D007371 ORTHO05D009319 2.1e-26 123.2 75 76.0
Nitab4.5_0007979g0070 Nicotiana tabacum HOM05D007371 ORTHO05D009319 3.5e-26 122.5 163 52.8
BolSC49t61144H Brassica oleracea HOM05D007371 ORTHO05D009319 1.8e-25 120.2 84 77.4
arahy.Tifrunner.gnm1.ann1.UDKX9E Arachis hypogaea HOM05D000890 ORTHO05D000697 6.7e-25 118.2 67 79.1
arahy.Tifrunner.gnm1.ann1.4VL02K Arachis hypogaea HOM05D001200 ORTHO05D009778 2.2e-23 113.2 74 79.7
arahy.Tifrunner.gnm1.ann1.9I8ZI2 Arachis hypogaea HOM05D001200 ORTHO05D009778 2.2e-23 113.2 74 79.7
arahy.Tifrunner.gnm1.ann1.V71EA1 Arachis hypogaea HOM05D001200 ORTHO05D009778 2.2e-23 113.2 74 79.7
arahy.Tifrunner.gnm1.ann1.5E4H9C Arachis hypogaea HOM05D007371 ORTHO05D009319 3.7e-23 112.5 73 82.2
RcHm_v2.0_Chr4g0438011 Rosa chinensis HOM05D007371 ORTHO05D009319 6.3e-23 111.7 60 93.3
BraSC138t45534Z Brassica rapa HOM05D007371 ORTHO05D009319 1.4e-22 110.5 94 67.0
SMO086G0016 Selaginella moellendorffii HOM05D007371 ORTHO05D009319 2.9e-20 102.8 162 45.1
BolC2t10612H Brassica oleracea HOM05D007371 ORTHO05D009319 1.1e-19 100.9 69 81.2
HanXRQChr00c0703g0576941 Helianthus annuus HOM05D007371 ORTHO05D009319 1.9e-19 100.1 60 91.7
Solyc11g021217.1 Solanum lycopersicum HOM05D007371 ORTHO05D009319 2.1e-18 96.7 75 73.3
HanXRQChr02g0037971 Helianthus annuus HOM05D007371 ORTHO05D009319 6.1e-18 95.1 68 79.4
Aa31LG5G21710 Aethionema arabicum HOM05D007371 ORTHO05D009319 2.3e-17 93.2 105 57.1
Mapoly0048s0040 Marchantia polymorpha HOM05D007371 ORTHO05D009319 1.3e-15 87.4 99 46.5
CsaV3_UNG210150 Cucumis sativus L. HOM05D001200 ORTHO05D009713 7.2e-11 71.6 45 77.8
HanXRQChr02g0038001 Helianthus annuus HOM05D007371 ORTHO05D009319 3.6e-10 69.3 50 76.0
Lalb_Chr11g0071331 Lupinus albus HOM05D007371 ORTHO05D009319 2.3e-09 66.6 70 54.3
Lalb_Chr09g0335451 Lupinus albus HOM05D007371 ORTHO05D009319 8.8e-09 64.7 50 70.0
Haze_02268 Corylus avellana HOM05D007371 ORTHO05D009319 7.4e-08 61.6 42 76.2
Hund24330 Selenicereus undatus HOM05D007371 ORTHO05D009319 4.8e-07 58.9 41 68.3
BolC7t43856H Brassica oleracea HOM05D007371 ORTHO05D009319 8.2e-07 58.2 47 66.0


User provided reference genes

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