Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr17g0569581 Helianthus annuus HOM05D007247 ORTHO05D009208 3.6e-62 241.5 132 100.0
HanXRQChr12g0385811 Helianthus annuus HOM05D007247 ORTHO05D009208 5.1e-24 114.8 85 69.4
Lsat_1_v5_gn_4_4161 Lactuca sativa HOM05D007247 ORTHO05D009208 1.1e-23 113.6 68 77.9
ECA234G3809 Erigeron canadensis HOM05D007247 ORTHO05D009208 6.7e-16 87.8 77 63.6
Actinidia01350 Actinidia chinensis HOM05D000233 ORTHO05D000020 3.7e-14 82.0 66 62.1
Oeu001697.1 Olea europaea HOM05D007247 ORTHO05D009208 1.4e-13 80.1 68 63.2
Solyc05g013560.3 Solanum lycopersicum HOM05D007247 ORTHO05D009208 4.1e-13 78.6 79 54.4
Actinidia08135 Actinidia chinensis HOM05D007247 ORTHO05D009208 5.3e-13 78.2 52 71.2
Hma1.2p1_0079F.1_g041000 Hydrangea macrophylla HOM05D007247 ORTHO05D009208 7.0e-13 77.8 68 57.4
Dinv15222 Davidia involucrata HOM05D007247 ORTHO05D009208 9.1e-13 77.4 69 59.4
Sopen05g008460 Solanum pennellii HOM05D007247 ORTHO05D009208 1.2e-12 77.0 79 53.2
Peaxi162Scf00128g00216 Petunia axillaris HOM05D007247 ORTHO05D009208 1.6e-12 76.6 69 56.5
TPR.G38802 Trifolium pratense HOM05D007247 ORTHO05D009208 2.6e-12 75.9 65 63.1
Dinv14726 Davidia involucrata HOM05D007247 ORTHO05D009208 3.5e-12 75.5 62 62.9
Glyma.18G144900 Glycine max HOM05D007247 ORTHO05D009208 5.9e-12 74.7 46 78.3
Phvul.003G064700 Phaseolus vulgaris HOM05D007247 ORTHO05D009208 5.9e-12 74.7 48 75.0
VMungo0251G0750 Vigna mungo HOM05D007247 ORTHO05D009208 5.9e-12 74.7 48 75.0
MSTRG.13349 Avicennia marina HOM05D007247 ORTHO05D009208 7.7e-12 74.3 71 56.3
Actinidia15099 Actinidia chinensis HOM05D000233 ORTHO05D000020 1.0e-11 73.9 48 70.8
Lj6E813T0 Lonicera japonica HOM05D007247 ORTHO05D009208 1.0e-11 73.9 68 58.8
Medtr5g032790 Medicago truncatula HOM05D007247 ORTHO05D009208 1.3e-11 73.6 65 63.1
BraA08t34615Z Brassica rapa HOM05D007247 ORTHO05D009208 1.7e-11 73.2 62 56.5
Lj4g0020020 Lotus japonicus HOM05D007247 ORTHO05D009208 1.7e-11 73.2 67 59.7
BcaB03g12051 Brassica carinata HOM05D007247 ORTHO05D009208 2.2e-11 72.8 65 58.5
Glyma.08G281800 Glycine max HOM05D007247 ORTHO05D009208 2.2e-11 72.8 98 44.9
Oeu057538.1 Olea europaea HOM05D007247 ORTHO05D009208 2.2e-11 72.8 67 56.7
CARHR026490 Cardamine hirsuta HOM05D007247 ORTHO05D009208 2.9e-11 72.4 49 69.4
TPR.G17749 Trifolium pratense HOM05D007247 ORTHO05D009208 2.9e-11 72.4 64 57.8
Ca_22588_v3 Cicer arietinum L. HOM05D007247 ORTHO05D009208 5.0e-11 71.6 46 76.1
DCAR_026511 Daucus carota HOM05D007247 ORTHO05D009208 5.0e-11 71.6 59 66.1
Sp1g23190 Schrenkiella parvula HOM05D007247 ORTHO05D009208 5.0e-11 71.6 51 68.6
C03p73320 Brassica napus HOM05D007247 ORTHO05D009208 6.5e-11 71.2 65 56.9
Thecc.02G261000 Theobroma cacao HOM05D007247 ORTHO05D009208 6.5e-11 71.2 86 46.5
A08p26670 Brassica napus HOM05D007247 ORTHO05D009208 8.5e-11 70.9 62 54.8
Medtr8g069350 Medicago truncatula HOM05D007247 ORTHO05D009208 8.5e-11 70.9 46 73.9
QL03p057801 Quercus lobata HOM05D007247 ORTHO05D009208 8.5e-11 70.9 63 57.1
THA.LOC104825564 Tarenaya hassleriana HOM05D007247 ORTHO05D009208 8.5e-11 70.9 83 45.8
Eucgr.H02494 Eucalyptus grandis HOM05D007247 ORTHO05D009208 1.1e-10 70.5 66 56.1
Prupe.1G245600 Prunus persica HOM05D007247 ORTHO05D009208 1.5e-10 70.1 60 58.3
MD16G1101300 Malus domestica HOM05D007247 ORTHO05D009208 1.9e-10 69.7 45 75.6
Psat2g084240 Pisum sativum HOM05D007247 ORTHO05D009208 1.9e-10 69.7 52 67.3
AL1G40330 Arabidopsis lyrata HOM05D007247 ORTHO05D009208 3.2e-10 68.9 44 72.7
COL.COLO4_04829 Corchorus olitorius HOM05D007247 ORTHO05D009208 3.2e-10 68.9 87 46.0
Thhalv10009220m.g Eutrema salsugineum HOM05D007247 ORTHO05D009208 3.2e-10 68.9 59 55.9
MD13G1100900 Malus domestica HOM05D007247 ORTHO05D009208 3.2e-10 68.9 42 78.6
Rhsim12G0040300 Rhododendron simsii HOM05D007247 ORTHO05D009208 3.2e-10 68.9 54 64.8
Gohir.A03G134800 Gossypium hirsutum HOM05D007247 ORTHO05D009208 4.2e-10 68.6 47 68.1
Gohir.D02G158400 Gossypium hirsutum HOM05D007247 ORTHO05D009208 4.2e-10 68.6 47 68.1
Gorai.005G177800 Gossypium raimondii HOM05D007247 ORTHO05D009208 4.2e-10 68.6 47 68.1
Atru.chr11.2143 Acer truncatum HOM05D007247 ORTHO05D009208 5.5e-10 68.2 62 54.8
Aa31sc790G10 Aethionema arabicum HOM05D007247 ORTHO05D009208 5.5e-10 68.2 65 56.9
BcaB03g15384 Brassica carinata HOM05D007247 ORTHO05D009208 5.5e-10 68.2 84 45.2
BcaC01g01656 Brassica carinata HOM05D007247 ORTHO05D009208 5.5e-10 68.2 65 55.4
BcaC08g46018 Brassica carinata HOM05D007247 ORTHO05D009208 5.5e-10 68.2 93 40.9
C06p38130 Brassica napus HOM05D007247 ORTHO05D009208 5.5e-10 68.2 93 40.9
BolC3t19629H Brassica oleracea HOM05D007247 ORTHO05D009208 5.5e-10 68.2 65 55.4
BolC6t38910H Brassica oleracea HOM05D007247 ORTHO05D009208 5.5e-10 68.2 93 40.9
Carub.0002s1440 Capsella rubella HOM05D007247 ORTHO05D009208 7.2e-10 67.8 47 68.1
Psat4g115600 Pisum sativum HOM05D007247 ORTHO05D009208 7.2e-10 67.8 72 52.8
SalBow8G0600 Salvia bowleyana HOM05D007247 ORTHO05D009208 7.2e-10 67.8 61 54.1
AT1G67910 Arabidopsis thaliana HOM05D007247 ORTHO05D009208 9.4e-10 67.4 47 68.1
A07p32290 Brassica napus HOM05D007247 ORTHO05D009208 9.4e-10 67.4 45 68.9
BraA07t30854Z Brassica rapa HOM05D007247 ORTHO05D009208 9.4e-10 67.4 45 68.9
Duzib251G0560 Durio zibethinus HOM05D007247 ORTHO05D009208 9.4e-10 67.4 44 70.5
Manes.12G022500 Manihot esculenta HOM05D007247 ORTHO05D009208 9.4e-10 67.4 72 52.8
unitig_8.g3935 Utricularia gibba HOM05D007247 ORTHO05D009208 9.4e-10 67.4 50 66.0
AL2G26710 Arabidopsis lyrata HOM05D007247 ORTHO05D009208 1.2e-09 67.0 96 40.6
Ciclev10033189m.g Citrus clementina HOM05D007247 ORTHO05D009208 1.2e-09 67.0 72 50.0
Migut.E00205 Erythranthe guttata HOM05D000233 ORTHO05D000020 1.2e-09 67.0 44 70.5
CANSAT01G0364 Cannabis sativa HOM05D007247 ORTHO05D009208 2.1e-09 66.2 44 68.2
Carub.0001s2551 Capsella rubella HOM05D007247 ORTHO05D009208 2.1e-09 66.2 45 66.7
Potri.008G186200 Populus trichocarpa HOM05D007247 ORTHO05D009208 2.7e-09 65.9 75 49.3
CiPaw.05G181400 Carya illinoinensis HOM05D007247 ORTHO05D009208 3.6e-09 65.5 59 55.9
Duzib248G0486 Durio zibethinus HOM05D007247 ORTHO05D009208 3.6e-09 65.5 54 61.1
Haze_12254 Corylus avellana HOM05D007247 ORTHO05D009208 6.1e-09 64.7 62 54.8
Cfa009218 Carpinus fangiana HOM05D007247 ORTHO05D009208 8.0e-09 64.3 62 53.2
CiPaw.06G067400 Carya illinoinensis HOM05D007247 ORTHO05D009208 1.4e-08 63.5 65 53.8
Aqoxy5G03750 Aquilegia oxysepala HOM05D007247 ORTHO05D009208 1.8e-08 63.2 40 75.0
Nn4g22599 Nelumbo nucifera HOM05D007247 ORTHO05D009208 1.8e-08 63.2 53 62.3
GSVIVG01005747001 Vitis vinifera HOM05D000233 ORTHO05D000020 1.8e-08 63.2 65 53.8
Cfa009217 Carpinus fangiana HOM05D007247 ORTHO05D009208 2.3e-08 62.8 62 53.2
Lalb_Chr09g0326081 Lupinus albus HOM05D007247 ORTHO05D009208 3.0e-08 62.4 43 74.4
Sabra10G0021600 Salix brachista HOM05D007247 ORTHO05D009208 3.0e-08 62.4 88 43.2
Potri.010G046700 Populus trichocarpa HOM05D007247 ORTHO05D009208 5.2e-08 61.6 47 61.7
AT1G24577 Arabidopsis thaliana HOM05D007247 ORTHO05D009208 8.8e-08 60.8 44 63.6
unitig_22.g5530 Utricularia gibba HOM05D007247 ORTHO05D009208 8.8e-08 60.8 62 50.0
CSS0032991 Camellia sinensis var. sinensis HOM05D007247 ORTHO05D009208 1.5e-07 60.1 45 66.7
CSS0043579 Camellia sinensis var. sinensis HOM05D007247 ORTHO05D009208 1.5e-07 60.1 45 66.7
Sc04g0009510 Simmondsia chinensis HOM05D007247 ORTHO05D009208 1.5e-07 60.1 47 63.8
CsaV3_7G023850 Cucumis sativus L. HOM05D006736 ORTHO05D008459 2.0e-07 59.7 48 66.7
Oeu036994.1 Olea europaea HOM05D006736 ORTHO05D008459 3.3e-07 58.9 62 51.6
SGA_v2.0_scaffold73G24482 Striga asiatica HOM05D002257 ORTHO05D002417 3.3e-07 58.9 64 46.9
AUR62024275 Chenopodium quinoa HOM05D007247 ORTHO05D009208 4.4e-07 58.5 69 46.4
DCAR_024425 Daucus carota HOM05D000669 ORTHO05D000679 5.7e-07 58.2 55 60.0
Ah.06g181490 Amaranthus hybridus HOM05D006736 ORTHO05D008459 7.5e-07 57.8 82 42.7
TPR.G17947 Trifolium pratense HOM05D006736 ORTHO05D008459 7.5e-07 57.8 51 56.9
TAR622G0973 Trochodendron aralioides HOM05D007247 ORTHO05D009208 7.5e-07 57.8 62 53.2
TAR629G1528 Trochodendron aralioides HOM05D007247 ORTHO05D009208 7.5e-07 57.8 64 48.4
TAR636G3092 Trochodendron aralioides HOM05D007247 ORTHO05D009208 7.5e-07 57.8 71 47.9
TAR636G3342 Trochodendron aralioides HOM05D007247 ORTHO05D009208 7.5e-07 57.8 69 47.8
VMungo0540G0896 Vigna mungo HOM05D006736 ORTHO05D008459 7.5e-07 57.8 62 45.2
AUR62005467 Chenopodium quinoa HOM05D007247 ORTHO05D009208 9.7e-07 57.4 69 46.4
Migut.H01277 Erythranthe guttata HOM05D006736 ORTHO05D008459 9.7e-07 57.4 73 42.5
MD02G1048100 Malus domestica HOM05D008067 ORTHO05D010226 9.7e-07 57.4 56 51.8
Glyma.08G332400 Glycine max HOM05D006736 ORTHO05D008459 1.3e-06 57.0 53 56.6
Aqoxy3G01230 Aquilegia oxysepala HOM05D007247 ORTHO05D009208 1.7e-06 56.6 47 59.6
Manes.13G023600 Manihot esculenta HOM05D007247 ORTHO05D009208 1.7e-06 56.6 36 69.4
EL10Ac4g07540 Beta vulgaris HOM05D006736 ORTHO05D008459 2.2e-06 56.2 76 42.1
MBI14_g39127_MAGBIO Magnolia biondii HOM05D006736 ORTHO05D008459 2.2e-06 56.2 59 45.8
Lj2g0013738 Lotus japonicus HOM05D008067 ORTHO05D010226 2.8e-06 55.8 41 56.1
ATR0824G192 Amborella trichopoda HOM05D007247 ORTHO05D009208 3.7e-06 55.5 42 66.7
Haze_25708 Corylus avellana HOM05D008067 ORTHO05D010226 3.7e-06 55.5 60 53.3
Solyc12g006220.3 Solanum lycopersicum HOM05D006736 ORTHO05D008459 3.7e-06 55.5 51 56.9
Sopen12g002170 Solanum pennellii HOM05D006736 ORTHO05D008459 3.7e-06 55.5 51 56.9
Glyma.07G086900 Glycine max HOM05D008067 ORTHO05D010226 4.8e-06 55.1 41 61.0
Glyma.18G074500 Glycine max HOM05D006736 ORTHO05D008459 4.8e-06 55.1 42 64.3
Rhsim06G0178800 Rhododendron simsii HOM05D006736 ORTHO05D008459 4.8e-06 55.1 48 56.2
TAR624G0725 Trochodendron aralioides HOM05D008067 ORTHO05D010226 4.8e-06 55.1 58 46.6
Lj6g0005510 Lotus japonicus HOM05D006736 ORTHO05D008459 6.3e-06 54.7 69 43.5
QL02p085507 Quercus lobata HOM05D008067 ORTHO05D010226 6.3e-06 54.7 65 47.7
TPR.G35272 Trifolium pratense HOM05D003111 ORTHO05D003502 6.3e-06 54.7 57 52.6
HanXRQChr03g0080371 Helianthus annuus HOM05D007247 ORTHO05D009208 8.2e-06 54.3 52 57.7
PSO063G6114 Papaver somniferum HOM05D007247 ORTHO05D009208 8.2e-06 54.3 69 50.7
Prupe.7G230000 Prunus persica HOM05D008067 ORTHO05D010226 8.2e-06 54.3 62 45.2


User provided reference genes

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