Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr17g0569531 Helianthus annuus HOM05D006816 ORTHO05D008666 7.3e-299 1030.0 609 100.0
ECA234G3219 Erigeron canadensis HOM05D006816 ORTHO05D008666 3.3e-243 845.1 532 80.3
Lsat_1_v5_gn_4_4020 Lactuca sativa HOM05D006816 ORTHO05D008666 1.4e-241 839.7 539 80.0
Lj3C1059T10 Lonicera japonica HOM05D006816 ORTHO05D008666 1.0e-212 743.8 539 73.3
Dinv15216 Davidia involucrata HOM05D006816 ORTHO05D008666 1.3e-207 726.9 533 72.0
TAR622G0126 Trochodendron aralioides HOM05D006816 ORTHO05D008666 2.7e-200 702.6 540 69.6
Oeu057544.1 Olea europaea HOM05D006816 ORTHO05D008666 1.1e-193 680.6 545 67.0
GSVIVG01000542001 Vitis vinifera HOM05D006816 ORTHO05D008666 4.1e-193 678.7 532 68.2
Migut.K00611 Erythranthe guttata HOM05D006816 ORTHO05D008666 1.6e-192 676.8 533 67.2
Cpa.g.sc33.36 Carica papaya HOM05D006816 ORTHO05D008666 1.3e-191 673.7 542 65.3
Ciclev10030964m.g Citrus clementina HOM05D006816 ORTHO05D008666 4.3e-190 668.7 540 66.3
TWI36G0164 Tripterygium wilfordii HOM05D006816 ORTHO05D008666 1.6e-189 666.8 537 65.5
QL03p057598 Quercus lobata HOM05D006816 ORTHO05D008666 4.9e-186 655.2 551 64.1
Gohir.A03G133700 Gossypium hirsutum HOM05D006816 ORTHO05D008666 2.4e-185 652.9 543 65.4
CSS0008455 Camellia sinensis var. sinensis HOM05D006816 ORTHO05D008666 4.1e-185 652.1 540 65.2
Haze_12261 Corylus avellana HOM05D006816 ORTHO05D008666 4.6e-184 648.7 610 59.2
Gohir.D02G158100 Gossypium hirsutum HOM05D006816 ORTHO05D008666 1.3e-183 647.1 543 65.0
Gorai.005G177300 Gossypium raimondii HOM05D006816 ORTHO05D008666 1.3e-183 647.1 543 65.0
CsaV3_5G031010 Cucumis sativus L. HOM05D006816 ORTHO05D008666 1.1e-182 644.0 550 63.8
SalBow2G0630 Salvia bowleyana HOM05D006816 ORTHO05D008666 7.3e-182 641.3 552 62.7
Hund06034 Selenicereus undatus HOM05D006816 ORTHO05D008666 9.5e-182 641.0 543 63.2
Eucgr.H02486 Eucalyptus grandis HOM05D006816 ORTHO05D008666 2.8e-181 639.4 568 63.4
PGSC0003DMG400018598 Solanum tuberosum HOM05D006816 ORTHO05D008666 3.6e-181 639.0 544 63.1
FAN22G0176 Fragaria x ananassa HOM05D006816 ORTHO05D008666 3.1e-180 636.0 533 65.7
Sopen05g008580 Solanum pennellii HOM05D006816 ORTHO05D008666 3.1e-180 636.0 544 62.9
FAN17G1412 Fragaria x ananassa HOM05D006816 ORTHO05D008666 4.0e-180 635.6 533 65.1
PSO063G6228 Papaver somniferum HOM05D006816 ORTHO05D008666 5.2e-180 635.2 545 63.9
Nitab4.5_0006963g0030 Nicotiana tabacum HOM05D006816 ORTHO05D008666 1.5e-179 633.6 534 64.6
PSO754G0080 Papaver somniferum HOM05D006816 ORTHO05D008666 1.5e-179 633.6 545 63.7
Solyc05g013670.3 Solanum lycopersicum HOM05D006816 ORTHO05D008666 2.0e-179 633.3 544 62.5
MELO3C011940.2 Cucumis melo HOM05D006816 ORTHO05D008666 1.3e-178 630.6 563 62.9
C06p38240 Brassica napus HOM05D006816 ORTHO05D008666 1.7e-178 630.2 530 63.6
COL.COLO4_23463 Corchorus olitorius HOM05D006816 ORTHO05D008666 3.7e-178 629.0 582 60.1
THA.LOC104825556 Tarenaya hassleriana HOM05D006816 ORTHO05D008666 6.4e-178 628.2 518 64.5
Thhalv10018280m.g Eutrema salsugineum HOM05D006816 ORTHO05D008666 8.3e-178 627.9 533 63.2
BcaB03g15378 Brassica carinata HOM05D006816 ORTHO05D008666 1.1e-177 627.5 533 63.4
Ah.02g130220 Amaranthus hybridus HOM05D006816 ORTHO05D008666 2.4e-177 626.3 534 63.5
Aqoxy5G03738 Aquilegia oxysepala HOM05D006816 ORTHO05D008666 4.1e-177 625.5 539 62.3
CARHR060480 Cardamine hirsuta HOM05D006816 ORTHO05D008666 4.1e-177 625.5 530 63.2
BcaC08g46032 Brassica carinata HOM05D006816 ORTHO05D008666 7.1e-177 624.8 532 63.7
CANSAT01G2021 Cannabis sativa HOM05D006816 ORTHO05D008666 1.2e-176 624.0 541 62.5
Sp5g22850 Schrenkiella parvula HOM05D006816 ORTHO05D008666 1.2e-176 624.0 530 62.6
BolC6t38923H Brassica oleracea HOM05D006816 ORTHO05D008666 1.6e-176 623.6 533 63.2
EL10Ac6g13857 Beta vulgaris HOM05D006816 ORTHO05D008666 1.0e-175 620.9 533 63.8
Sed0004203 Sechium edule HOM05D006816 ORTHO05D008666 1.0e-175 620.9 540 62.0
Glyma.05G174600 Glycine max HOM05D006816 ORTHO05D008666 1.7e-175 620.2 543 63.0
Lalb_Chr07g0185401 Lupinus albus HOM05D006816 ORTHO05D008666 1.7e-175 620.2 544 61.9
AT1G67840 Arabidopsis thaliana HOM05D006816 ORTHO05D008666 3.0e-175 619.4 530 62.8
MD13G1099700 Malus domestica HOM05D006816 ORTHO05D008666 8.6e-175 617.8 551 62.8
Carub.0002s1430 Capsella rubella HOM05D006816 ORTHO05D008666 1.5e-174 617.1 531 63.3
AL2G26590 Arabidopsis lyrata HOM05D006816 ORTHO05D008666 3.3e-174 615.9 532 63.0
ClCG05G025840 Citrullus lanatus HOM05D006816 ORTHO05D008666 3.3e-174 615.9 558 62.0
BraA07t30858Z Brassica rapa HOM05D006816 ORTHO05D008666 4.3e-174 615.5 534 62.4
Nn4g22582 Nelumbo nucifera HOM05D006816 ORTHO05D008666 7.3e-174 614.8 543 63.0
vmacro01121 Vaccinium macrocarpon HOM05D006816 ORTHO05D008666 1.6e-173 613.6 554 62.5
Lj4g0008868 Lotus japonicus HOM05D006816 ORTHO05D008666 2.8e-173 612.8 545 62.2
Manes.13G022900 Manihot esculenta HOM05D006816 ORTHO05D008666 4.7e-173 612.1 549 61.4
A07p32350 Brassica napus HOM05D006816 ORTHO05D008666 1.1e-172 610.9 534 61.8
Peaxi162Scf00128g00318 Petunia axillaris HOM05D006816 ORTHO05D008666 1.8e-172 610.1 530 62.6
Aa31sc755G30 Aethionema arabicum HOM05D006816 ORTHO05D008666 4.0e-172 609.0 532 61.3
Ca_17778_v3 Cicer arietinum L. HOM05D006816 ORTHO05D008666 4.0e-172 609.0 539 61.4
AUR62024254 Chenopodium quinoa HOM05D006816 ORTHO05D008666 1.2e-171 607.4 566 59.4
Sabra10G0021100 Salix brachista HOM05D006816 ORTHO05D008666 1.5e-171 607.1 542 62.0
Medtr8g089810 Medicago truncatula HOM05D006816 ORTHO05D008666 7.6e-171 604.7 545 59.8
unitig_699.g19932 Utricularia gibba HOM05D006816 ORTHO05D008666 3.8e-170 602.4 530 62.1
Phvul.002G259600 Phaseolus vulgaris HOM05D006816 ORTHO05D008666 4.9e-170 602.1 541 61.0
Atru.chr11.2152 Acer truncatum HOM05D006816 ORTHO05D008666 6.4e-170 601.7 531 60.3
VMungo0251G0196 Vigna mungo HOM05D006816 ORTHO05D008666 2.4e-169 599.7 541 61.4
Cc11_g15850 Coffea canephora HOM05D006816 ORTHO05D008666 3.9e-167 592.4 533 63.8
TPR.G6183 Trifolium pratense HOM05D006816 ORTHO05D008666 1.9e-166 590.1 545 58.2
FvH4_4g25720 Fragaria vesca HOM05D006816 ORTHO05D008666 6.2e-165 585.1 533 60.4
PGR119G0117 Punica granatum HOM05D006816 ORTHO05D008666 4.0e-164 582.4 543 59.9
FAN12G1622 Fragaria x ananassa HOM05D006816 ORTHO05D008666 1.5e-163 580.5 533 60.8
RcHm_v2.0_Chr4g0433151 Rosa chinensis HOM05D006816 ORTHO05D008666 1.2e-160 570.9 546 58.6
Psat7g059360 Pisum sativum HOM05D006816 ORTHO05D008666 1.3e-159 567.4 537 57.2
ATR0824G245 Amborella trichopoda HOM05D006816 ORTHO05D008666 7.6e-155 551.6 557 55.3
Duzib251G0886 Durio zibethinus HOM05D006816 ORTHO05D008666 3.8e-154 549.3 546 56.6
Actinidia01356 Actinidia chinensis HOM05D006816 ORTHO05D008666 4.9e-154 548.9 466 65.9
AUR62005487 Chenopodium quinoa HOM05D006816 ORTHO05D008666 6.4e-154 548.5 604 52.6
CAN.G436.5 Capsicum annuum HOM05D006816 ORTHO05D008666 3.3e-150 536.2 468 61.5
Zm00001eb319330 Zea mays HOM05D006816 ORTHO05D008666 5.3e-148 528.9 539 55.3
Nitab4.5_0000524g0100 Nicotiana tabacum HOM05D006816 ORTHO05D008666 5.8e-147 525.4 459 63.6
DCAR_031163 Daucus carota HOM05D006816 ORTHO05D008666 2.4e-140 503.4 540 55.2
Sc11g0000930 Simmondsia chinensis HOM05D006816 ORTHO05D008666 3.0e-135 486.5 471 58.8
SEGI_18687 Sequoiadendron giganteum HOM05D006816 ORTHO05D008666 5.1e-127 459.1 526 49.2
SGA_v2.0_scaffold100G29566 Striga asiatica HOM05D006816 ORTHO05D008666 1.2e-123 448.0 556 48.7
Thecc.02G261900 Theobroma cacao HOM05D006816 ORTHO05D008666 1.7e-114 417.5 378 63.2
Potri.010G047500 Populus trichocarpa HOM05D006816 ORTHO05D008666 2.0e-107 394.0 366 61.5
arahy.Tifrunner.gnm1.ann1.2HFS1Z Arachis hypogaea HOM05D006816 ORTHO05D008666 6.1e-104 382.5 373 59.8
CiPaw.05G180700 Carya illinoinensis HOM05D006816 ORTHO05D008666 8.0e-104 382.1 324 65.4
arahy.Tifrunner.gnm1.ann1.CH9KSW Arachis hypogaea HOM05D006816 ORTHO05D008666 2.0e-102 377.5 373 59.0
HPP92_023364 Vanilla planifolia HOM05D006816 ORTHO05D008666 7.0e-100 369.0 323 61.3
FAN07G2231 Fragaria x ananassa HOM05D006816 ORTHO05D008666 7.2e-97 359.0 376 57.2
Prupe.1G246300 Prunus persica HOM05D006816 ORTHO05D008666 9.1e-92 342.0 374 54.5
CDE02G3152 Ceratophyllum demersum HOM05D006816 ORTHO05D008666 5.7e-86 322.8 429 47.8
Os12g0292900 Oryza sativa ssp. japonica HOM05D006816 ORTHO05D008666 2.2e-85 320.9 375 50.1
Mapoly0088s0066 Marchantia polymorpha HOM05D006816 ORTHO05D008666 1.1e-76 292.0 574 37.5
MBI17_g43191_MAGBIO Magnolia biondii HOM05D006816 ORTHO05D008666 7.8e-59 232.6 224 60.3
Pp3c11_24610 Physcomitrium patens HOM05D006816 ORTHO05D008666 1.7e-53 214.9 489 33.1
Glyma.08G131850 Glycine max HOM05D006816 ORTHO05D008666 1.1e-47 195.7 176 59.7
Psat3g153160 Pisum sativum HOM05D006816 ORTHO05D008517 1.9e-36 158.3 128 61.7
Psat3g153200 Pisum sativum HOM05D006816 ORTHO05D008666 2.4e-36 157.9 129 61.2
Psat2g121560 Pisum sativum HOM05D006816 ORTHO05D008666 6.9e-31 139.8 145 54.5
Psat4g077560 Pisum sativum HOM05D006816 ORTHO05D008666 1.3e-29 135.6 103 66.0
COL.COLO4_35805 Corchorus olitorius HOM05D006816 ORTHO05D008666 8.4e-29 132.9 97 64.9
HPP92_023363 Vanilla planifolia HOM05D006816 ORTHO05D008666 1.4e-28 132.1 131 53.4
CDE09G0157 Ceratophyllum demersum HOM05D006816 ORTHO05D008666 3.9e-26 124.0 162 44.4
CBR_g52389 Chara braunii HOM05D006816 ORTHO05D008666 5.1e-26 123.6 331 27.5
Actinidia08129 Actinidia chinensis HOM05D006816 ORTHO05D008666 4.2e-20 104.0 78 65.4
Actinidia01355 Actinidia chinensis HOM05D006816 ORTHO05D008666 3.3e-17 94.4 63 71.4
CBR_g52391 Chara braunii HOM05D006816 ORTHO05D008666 3.8e-13 80.9 184 32.1
FvH4_4g35670 Fragaria vesca HOM05D006816 ORTHO05D008666 5.0e-13 80.5 60 68.3
FAN22G1065 Fragaria x ananassa HOM05D000247 ORTHO05D000288 7.2e-12 76.6 58 65.5
Glyma.08G131775 Glycine max HOM05D006816 ORTHO05D008666 2.6e-06 58.2 84 46.4


User provided reference genes

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