Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr17g0569291 Helianthus annuus HOM05D006725 ORTHO05D008223 1.2e-95 353.2 182 100.0
Lsat_1_v5_gn_4_2821 Lactuca sativa HOM05D006725 ORTHO05D008223 5.2e-75 284.6 188 81.9
Dinv14799 Davidia involucrata HOM05D006725 ORTHO05D008223 3.0e-54 215.7 191 60.7
Peaxi162Scf00128g00835 Petunia axillaris HOM05D006725 ORTHO05D008223 1.6e-52 209.9 192 62.5
Sopen05g009780 Solanum pennellii HOM05D006725 ORTHO05D008223 1.8e-51 206.5 187 61.5
Solyc05g014650.2 Solanum lycopersicum HOM05D006725 ORTHO05D008223 6.8e-51 204.5 187 61.0
Duzib248G0208 Durio zibethinus HOM05D006725 ORTHO05D008223 2.0e-50 203.0 188 59.6
CSS0023056 Camellia sinensis var. sinensis HOM05D006725 ORTHO05D008223 2.6e-50 202.6 192 55.7
Gohir.A03G128700 Gossypium hirsutum HOM05D006725 ORTHO05D008223 3.4e-50 202.2 194 57.7
Thecc.02G274200 Theobroma cacao HOM05D006725 ORTHO05D008223 3.4e-50 202.2 194 58.8
Actinidia08088 Actinidia chinensis HOM05D006725 ORTHO05D008223 4.4e-50 201.8 195 57.9
Gorai.005G171500 Gossypium raimondii HOM05D006725 ORTHO05D008223 9.8e-50 200.7 194 57.7
COL.COLO4_23620 Corchorus olitorius HOM05D006725 ORTHO05D008223 1.3e-49 200.3 174 61.5
Gohir.D02G152500 Gossypium hirsutum HOM05D006725 ORTHO05D008223 1.3e-49 200.3 194 56.7
CiPaw.05G115200 Carya illinoinensis HOM05D006725 ORTHO05D008223 5.4e-48 194.9 188 56.9
Potri.008G105700 Populus trichocarpa HOM05D006725 ORTHO05D008223 1.6e-47 193.4 183 57.9
Rhsim12G0035000 Rhododendron simsii HOM05D006725 ORTHO05D008223 2.0e-47 193.0 219 50.2
SalBow2G1482 Salvia bowleyana HOM05D006725 ORTHO05D008223 3.5e-47 192.2 207 55.6
unitig_749.g13304 Utricularia gibba HOM05D006725 ORTHO05D008223 4.6e-47 191.8 192 58.9
TWI18G0344 Tripterygium wilfordii HOM05D006725 ORTHO05D008223 6.0e-47 191.4 195 54.4
vmacro01086 Vaccinium macrocarpon HOM05D006725 ORTHO05D008223 6.0e-47 191.4 173 57.8
CANSAT56G1091 Cannabis sativa HOM05D006725 ORTHO05D008223 1.0e-46 190.7 179 55.9
PGR102G0799 Punica granatum HOM05D006725 ORTHO05D008223 1.3e-46 190.3 189 55.6
TAR374G1568 Trochodendron aralioides HOM05D006725 ORTHO05D008223 1.3e-46 190.3 189 55.6
Ca_16483_v3 Cicer arietinum L. HOM05D006725 ORTHO05D008223 5.0e-46 188.3 155 61.3
ClCG08G017310 Citrullus lanatus HOM05D006725 ORTHO05D008223 5.0e-46 188.3 179 57.5
Nitab4.5_0000581g0080 Nicotiana tabacum HOM05D006725 ORTHO05D008223 5.0e-46 188.3 186 57.0
Ciclev10032688m.g Citrus clementina HOM05D006725 ORTHO05D008223 6.6e-46 188.0 185 54.6
Migut.K00702 Erythranthe guttata HOM05D006725 ORTHO05D008223 6.6e-46 188.0 189 54.5
Glyma.11G248100 Glycine max HOM05D006725 ORTHO05D008223 3.3e-45 185.7 151 62.9
Nn4g22406 Nelumbo nucifera HOM05D006725 ORTHO05D008223 3.3e-45 185.7 147 63.3
Prupe.1G233300 Prunus persica HOM05D006725 ORTHO05D008223 3.3e-45 185.7 191 56.0
MD13G1112100 Malus domestica HOM05D006725 ORTHO05D008223 4.3e-45 185.3 136 68.4
THA.LOC104825521 Tarenaya hassleriana HOM05D006725 ORTHO05D008223 4.3e-45 185.3 166 59.6
Phvul.001G259500 Phaseolus vulgaris HOM05D006725 ORTHO05D008223 7.3e-45 184.5 140 65.0
Aqoxy5G03519 Aquilegia oxysepala HOM05D006725 ORTHO05D008223 1.2e-44 183.7 185 55.1
MD16G1111700 Malus domestica HOM05D006725 ORTHO05D008223 1.2e-44 183.7 185 56.2
RcHm_v2.0_Chr4g0431131 Rosa chinensis HOM05D006725 ORTHO05D008223 1.6e-44 183.3 186 55.9
arahy.Tifrunner.gnm1.ann1.245RAI Arachis hypogaea HOM05D006725 ORTHO05D008223 2.8e-44 182.6 186 55.4
PSO063G2169 Papaver somniferum HOM05D006725 ORTHO05D008223 2.8e-44 182.6 186 55.9
Cfa009314 Carpinus fangiana HOM05D006725 ORTHO05D008223 3.6e-44 182.2 181 54.7
Glyma.18G009100 Glycine max HOM05D006725 ORTHO05D008223 3.6e-44 182.2 135 67.4
PSO782G3390 Papaver somniferum HOM05D006725 ORTHO05D008223 3.6e-44 182.2 184 56.0
TPR.G22435 Trifolium pratense HOM05D006725 ORTHO05D008223 4.7e-44 181.8 155 62.6
Lj3g0011418 Lotus japonicus HOM05D006725 ORTHO05D008223 8.1e-44 181.0 188 57.4
Lj3A1064T102 Lonicera japonica HOM05D006725 ORTHO05D008223 1.4e-43 180.3 189 55.0
Sed0015494 Sechium edule HOM05D006725 ORTHO05D008223 1.4e-43 180.3 190 53.2
EL10Ac6g13437 Beta vulgaris HOM05D006725 ORTHO05D008223 1.8e-43 179.9 182 56.0
Medtr3g085720 Medicago truncatula HOM05D006725 ORTHO05D008223 4.0e-43 178.7 184 54.9
AT1G67620 Arabidopsis thaliana HOM05D006725 ORTHO05D008223 8.9e-43 177.6 183 55.2
SGA_v2.0_scaffold46G17392 Striga asiatica HOM05D006725 ORTHO05D008223 8.9e-43 177.6 182 54.9
Psat5g094640 Pisum sativum HOM05D006725 ORTHO05D008223 1.2e-42 177.2 164 57.9
QL03p054759 Quercus lobata HOM05D006725 ORTHO05D008223 1.5e-42 176.8 188 53.2
FAN12G1259 Fragaria x ananassa HOM05D006725 ORTHO05D008223 2.0e-42 176.4 195 53.8
Atru.chr11.2260 Acer truncatum HOM05D006725 ORTHO05D008223 2.6e-42 176.0 188 54.3
Carub.0002s1395 Capsella rubella HOM05D006725 ORTHO05D008223 5.8e-42 174.9 186 54.8
Manes.13G015700 Manihot esculenta HOM05D006725 ORTHO05D008223 5.8e-42 174.9 164 60.4
Atru.chr11.2245 Acer truncatum HOM05D006725 ORTHO05D008223 7.5e-42 174.5 186 52.7
Aqoxy5G03514 Aquilegia oxysepala HOM05D006725 ORTHO05D008223 1.7e-41 173.3 168 56.5
Lalb_Chr11g0075681 Lupinus albus HOM05D006725 ORTHO05D008223 1.7e-41 173.3 180 53.9
CARHR060190 Cardamine hirsuta HOM05D006725 ORTHO05D008223 2.9e-41 172.6 176 55.1
CsaV3_2G025320 Cucumis sativus L. HOM05D006725 ORTHO05D008223 2.9e-41 172.6 147 59.2
HPP92_021374 Vanilla planifolia HOM05D006725 ORTHO05D008223 3.7e-41 172.2 139 65.5
arahy.Tifrunner.gnm1.ann1.ZVR9LL Arachis hypogaea HOM05D006725 ORTHO05D008223 8.3e-41 171.0 161 56.5
Haze_12368 Corylus avellana HOM05D006725 ORTHO05D008223 1.4e-40 170.2 218 46.8
DCAR_007015 Daucus carota HOM05D006725 ORTHO05D008223 1.4e-40 170.2 190 49.5
FAN22G0294 Fragaria x ananassa HOM05D006725 ORTHO05D008223 1.4e-40 170.2 195 52.3
Hund06064 Selenicereus undatus HOM05D006725 ORTHO05D008223 7.1e-40 167.9 179 52.0
ATR0609G130 Amborella trichopoda HOM05D006725 ORTHO05D008223 1.6e-39 166.8 142 59.2
AL2G26280 Arabidopsis lyrata HOM05D006725 ORTHO05D008223 3.5e-39 165.6 186 52.7
Thhalv10019173m.g Eutrema salsugineum HOM05D006725 ORTHO05D008223 3.5e-39 165.6 161 58.4
Zm00001eb133570 Zea mays HOM05D006725 ORTHO05D008223 1.3e-38 163.7 147 57.8
Os12g0241100 Oryza sativa ssp. japonica HOM05D006725 ORTHO05D008223 5.1e-38 161.8 180 50.6
BraA07t31044Z Brassica rapa HOM05D006725 ORTHO05D008223 1.5e-37 160.2 152 53.3
AUR62005570 Chenopodium quinoa HOM05D006725 ORTHO05D008223 1.5e-37 160.2 214 48.1
Sabra08G0079700 Salix brachista HOM05D006725 ORTHO05D008223 2.5e-37 159.5 191 51.3
A07p34140 Brassica napus HOM05D006725 ORTHO05D008223 3.3e-37 159.1 155 53.5
BolC6t39176H Brassica oleracea HOM05D006725 ORTHO05D008223 3.3e-37 159.1 148 53.4
BraA07t31040Z Brassica rapa HOM05D006725 ORTHO05D008223 3.3e-37 159.1 151 53.0
BcaB03g15182 Brassica carinata HOM05D006725 ORTHO05D008223 4.3e-37 158.7 147 53.1
BcaC08g46171 Brassica carinata HOM05D006725 ORTHO05D008223 9.5e-37 157.5 148 52.7
C06p42630 Brassica napus HOM05D006725 ORTHO05D008223 9.5e-37 157.5 148 52.7
Eucgr.B03461 Eucalyptus grandis HOM05D006725 ORTHO05D008223 9.5e-37 157.5 199 45.2
GSVIVG01010346001 Vitis vinifera HOM05D006725 ORTHO05D008223 4.7e-36 155.2 103 74.8
Aa31LG4G12010 Aethionema arabicum HOM05D006725 ORTHO05D008223 5.8e-34 148.3 138 54.3
ECA234G0356 Erigeron canadensis HOM05D006725 ORTHO05D008223 5.8e-34 148.3 110 73.6
CDE09G0294 Ceratophyllum demersum HOM05D006725 ORTHO05D008223 1.3e-33 147.1 103 70.9
Sc04g0004650 Simmondsia chinensis HOM05D006725 ORTHO05D008223 1.9e-29 133.3 159 44.7
Cc11_g16590 Coffea canephora HOM05D006725 ORTHO05D008223 5.2e-27 125.2 82 76.8
MELO3C010728.2 Cucumis melo HOM05D006725 ORTHO05D008223 5.2e-27 125.2 100 63.0
Nitab4.5_0000240g0060 Nicotiana tabacum HOM05D006725 ORTHO05D008223 7.1e-24 114.8 83 69.9
SalBow3G4645 Salvia bowleyana HOM05D006725 ORTHO05D008223 1.7e-22 110.2 81 71.6
Oeu041686.1 Olea europaea HOM05D006725 ORTHO05D008223 3.9e-22 109.0 101 59.4
Pp3c8_14070 Physcomitrium patens HOM05D006725 ORTHO05D008223 3.6e-20 102.4 123 38.2
SalBow1G8122 Salvia bowleyana HOM05D004872 ORTHO05D006050 3.6e-20 102.4 72 72.2
CAN.G1081.12 Capsicum annuum HOM05D006725 ORTHO05D008223 8.1e-20 101.3 71 66.2
CAN.G3094.1 Capsicum annuum HOM05D006725 ORTHO05D008223 8.1e-20 101.3 71 66.2
AUR62024160 Chenopodium quinoa HOM05D006725 ORTHO05D008223 8.1e-20 101.3 118 44.9
arahy.Tifrunner.gnm1.ann1.GPZA99 Arachis hypogaea HOM05D006725 ORTHO05D008223 1.4e-19 100.5 112 50.0
RcHm_v2.0_Chr1g0343341 Rosa chinensis HOM05D006725 ORTHO05D008223 1.4e-19 100.5 72 68.1
CAN.G1081.11 Capsicum annuum HOM05D006725 ORTHO05D008223 1.8e-19 100.1 102 55.9
CAN.G3094.2 Capsicum annuum HOM05D006725 ORTHO05D008223 1.8e-19 100.1 102 55.9
RcHm_v2.0_Chr7g0198741 Rosa chinensis HOM05D006725 ORTHO05D008223 9.0e-19 97.8 76 60.5
MBI08_g41741_MAGBIO Magnolia biondii HOM05D006725 ORTHO05D008223 1.5e-18 97.1 57 78.9
VMungo1383G0611 Vigna mungo HOM05D006725 ORTHO05D008223 3.4e-18 95.9 195 37.9
SMO141G0262 Selaginella moellendorffii HOM05D006725 ORTHO05D008223 2.9e-17 92.8 105 40.0
CBR_g17596 Chara braunii HOM05D006725 ORTHO05D008223 3.8e-17 92.4 112 38.4
Actinidia30676 Actinidia chinensis HOM05D006725 ORTHO05D008223 6.4e-17 91.7 95 53.7
CDE02G2623 Ceratophyllum demersum HOM05D006725 ORTHO05D008223 2.4e-16 89.7 101 51.5
Hma1.2p1_0167F.1_g073800 Hydrangea macrophylla HOM05D006725 ORTHO05D008223 6.0e-15 85.1 52 73.1
FvH4_4g24330 Fragaria vesca HOM05D006725 ORTHO05D008223 1.8e-14 83.6 98 49.0
Atru.chr7.1050 Acer truncatum HOM05D006725 ORTHO05D008223 1.5e-13 80.5 70 61.4
Cpa.g.sc351.2 Carica papaya HOM05D006725 ORTHO05D008223 7.4e-13 78.2 182 34.1
RcHm_v2.0_Chr1g0366581 Rosa chinensis HOM05D006725 ORTHO05D008223 9.0e-11 71.2 52 67.3
RcHm_v2.0_Chr3g0456071 Rosa chinensis HOM05D006725 ORTHO05D008223 1.5e-10 70.5 51 66.7
MCO03G004 Micromonas commoda HOM05D006725 ORTHO05D008223 2.0e-10 70.1 119 33.6
RcHm_v2.0_Chr7g0183971 Rosa chinensis HOM05D006725 ORTHO05D008223 2.0e-10 70.1 52 65.4
SpUn0282_0010 Schrenkiella parvula HOM05D006725 ORTHO05D008223 8.4e-09 64.7 54 66.7
MBI08_g41742_MAGBIO Magnolia biondii HOM05D006725 ORTHO05D008223 4.6e-07 58.9 85 40.0


User provided reference genes

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