Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr17g0568921 Helianthus annuus HOM05D002793 ORTHO05D002965 6.8e-108 394.0 205 100.0
Lsat_1_v5_gn_4_2241 Lactuca sativa HOM05D001548 ORTHO05D002965 1.3e-21 107.5 240 37.5
Lsat_1_v5_gn_3_31200 Lactuca sativa HOM05D002793 ORTHO05D002965 5.5e-17 92.0 173 43.4
HanXRQChr08g0209951 Helianthus annuus HOM05D002793 ORTHO05D002965 8.3e-13 78.2 229 33.6
ECA246G3465 Erigeron canadensis HOM05D002793 ORTHO05D002965 1.6e-11 73.9 171 36.8
CSS0013139 Camellia sinensis var. sinensis HOM05D002793 ORTHO05D002965 3.8e-10 69.3 188 38.3
Glyma.10G298100 Glycine max HOM05D002793 ORTHO05D002965 3.8e-10 69.3 164 34.8
ECA233G4400 Erigeron canadensis HOM05D002793 ORTHO05D002965 1.1e-09 67.8 271 30.3
Duzib268G1080 Durio zibethinus HOM05D002793 ORTHO05D002965 1.5e-09 67.4 186 35.5
Nitab4.5_0000542g0010 Nicotiana tabacum HOM05D002793 ORTHO05D002965 1.5e-09 67.4 248 29.8
Glyma.20G249200 Glycine max HOM05D002793 ORTHO05D002965 1.9e-09 67.0 164 36.0
PGSC0003DMG401019811 Solanum tuberosum HOM05D002793 ORTHO05D002965 5.6e-09 65.5 181 35.9
COL.COLO4_05010 Corchorus olitorius HOM05D002793 ORTHO05D002965 7.3e-09 65.1 186 35.5
MELO3C022322.2 Cucumis melo HOM05D002793 ORTHO05D002965 7.3e-09 65.1 184 34.2
Medtr3g085710 Medicago truncatula HOM05D002793 ORTHO05D002965 7.3e-09 65.1 187 33.7
Haze_12447 Corylus avellana HOM05D002793 ORTHO05D002965 9.5e-09 64.7 191 31.9
Thecc.02G201800 Theobroma cacao HOM05D002793 ORTHO05D002965 9.5e-09 64.7 186 36.6
CsaV3_6G008130 Cucumis sativus L. HOM05D002793 ORTHO05D002965 1.2e-08 64.3 177 35.0
Gohir.A05G310200 Gossypium hirsutum HOM05D002793 ORTHO05D002965 1.2e-08 64.3 186 35.5
Actinidia39798 Actinidia chinensis HOM05D002793 ORTHO05D002965 1.6e-08 63.9 319 27.6
Aqoxy5G03293 Aquilegia oxysepala HOM05D002793 ORTHO05D002965 1.6e-08 63.9 165 35.2
Sed0027654 Sechium edule HOM05D002793 ORTHO05D002965 1.6e-08 63.9 186 34.9
Solyc05g015880.3 Solanum lycopersicum HOM05D002793 ORTHO05D002965 1.6e-08 63.9 179 36.3
Gorai.005G164100 Gossypium raimondii HOM05D002793 ORTHO05D002965 2.1e-08 63.5 186 33.9
Sopen05g011570 Solanum pennellii HOM05D002793 ORTHO05D002965 2.1e-08 63.5 178 35.4
FvH4_4g23460 Fragaria vesca HOM05D002793 ORTHO05D002965 2.8e-08 63.2 190 32.6
FAN12G0240 Fragaria x ananassa HOM05D002793 ORTHO05D002965 2.8e-08 63.2 190 32.6
Manes.12G008500 Manihot esculenta HOM05D002793 ORTHO05D002965 2.8e-08 63.2 187 32.1
Gorai.009G332000 Gossypium raimondii HOM05D002793 ORTHO05D002965 4.7e-08 62.4 179 34.1
GSVIVG01010528001 Vitis vinifera HOM05D002793 ORTHO05D002965 4.7e-08 62.4 190 33.2
Cpa.g.sc286.6 Carica papaya HOM05D002793 ORTHO05D002965 6.1e-08 62.0 184 31.5
MD13G1122400 Malus domestica HOM05D002793 ORTHO05D002965 6.1e-08 62.0 182 34.1
Gohir.D02G146600 Gossypium hirsutum HOM05D002793 ORTHO05D002965 8.0e-08 61.6 186 33.3
Dinv11689 Davidia involucrata HOM05D002793 ORTHO05D002965 1.4e-07 60.8 186 33.9
Gohir.A03G124200 Gossypium hirsutum HOM05D002793 ORTHO05D002965 1.8e-07 60.5 186 32.8
CiPaw.05G107100 Carya illinoinensis HOM05D002793 ORTHO05D002965 2.3e-07 60.1 182 33.5
Gohir.D05G311000 Gossypium hirsutum HOM05D002793 ORTHO05D002965 2.3e-07 60.1 186 33.9
Atru.chr11.2359 Acer truncatum HOM05D002793 ORTHO05D002965 3.0e-07 59.7 181 32.0
TPR.G8908 Trifolium pratense HOM05D002793 ORTHO05D002965 3.0e-07 59.7 161 35.4
CiPaw.06G105000 Carya illinoinensis HOM05D002793 ORTHO05D002965 6.8e-07 58.5 205 31.7
TWI36G0224 Tripterygium wilfordii HOM05D002793 ORTHO05D002965 6.8e-07 58.5 197 32.0
Ciclev10031707m.g Citrus clementina HOM05D002793 ORTHO05D002965 8.9e-07 58.2 181 30.4
Manes.13G009000 Manihot esculenta HOM05D002793 ORTHO05D002965 8.9e-07 58.2 186 31.2
Prupe.1G222800 Prunus persica HOM05D002793 ORTHO05D002965 8.9e-07 58.2 185 31.4
Potri.003G168700 Populus trichocarpa HOM05D002793 ORTHO05D002965 1.2e-06 57.8 181 33.1
QL03p051728 Quercus lobata HOM05D002793 ORTHO05D002965 1.2e-06 57.8 187 32.1
HanXRQChr08g0209931 Helianthus annuus HOM05D002793 ORTHO05D002965 1.5e-06 57.4 153 34.6
Sabra03G0123600 Salix brachista HOM05D002793 ORTHO05D002965 2.6e-06 56.6 180 33.3
TWI18G1253 Tripterygium wilfordii HOM05D002793 ORTHO05D002965 2.6e-06 56.6 186 34.9
Lalb_Chr02g0144551 Lupinus albus HOM05D002793 ORTHO05D002965 3.4e-06 56.2 173 32.4
Peaxi162Scf00128g01542 Petunia axillaris HOM05D002793 ORTHO05D002965 4.4e-06 55.8 161 33.5
MSTRG.484 Avicennia marina HOM05D002793 ORTHO05D002965 5.7e-06 55.5 179 32.4
MD16G1122900 Malus domestica HOM05D002793 ORTHO05D002965 9.8e-06 54.7 171 31.6
Potri.001G059100 Populus trichocarpa HOM05D002793 ORTHO05D002965 9.8e-06 54.7 179 31.3


User provided reference genes

Program Settings