Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr17g0567931 Helianthus annuus HOM05D004993 ORTHO05D008532 1.7e-191 672.5 341 100.0
Lsat_1_v5_gn_4_20101 Lactuca sativa HOM05D004993 ORTHO05D008532 2.7e-149 532.3 341 79.8
Hma1.2p1_0862F.1_g229950 Hydrangea macrophylla HOM05D004993 ORTHO05D008532 5.1e-132 474.9 341 70.1
Lj3A1018T65 Lonicera japonica HOM05D004993 ORTHO05D008532 8.1e-130 467.6 280 81.1
CiPaw.16G003600 Carya illinoinensis HOM05D004993 ORTHO05D008532 4.4e-128 461.8 320 71.2
MSTRG.7682 Avicennia marina HOM05D004993 ORTHO05D008532 9.9e-128 460.7 338 68.0
ECA234G2629 Erigeron canadensis HOM05D004993 ORTHO05D008532 1.3e-127 460.3 293 79.2
Cfa018620 Carpinus fangiana HOM05D004993 ORTHO05D008532 2.4e-126 456.1 322 70.5
Gohir.D12G172900 Gossypium hirsutum HOM05D004993 ORTHO05D008532 5.4e-126 454.9 314 70.7
Gorai.008G185400 Gossypium raimondii HOM05D004993 ORTHO05D008532 7.1e-126 454.5 314 70.7
Gorai.008G186000 Gossypium raimondii HOM05D004993 ORTHO05D008532 9.2e-126 454.1 281 75.8
Thecc.02G359900 Theobroma cacao HOM05D004993 ORTHO05D008532 1.2e-125 453.8 319 69.9
Cc11_g10510 Coffea canephora HOM05D004993 ORTHO05D008532 2.7e-125 452.6 329 68.1
Gohir.D12G173500 Gossypium hirsutum HOM05D004993 ORTHO05D008532 3.5e-125 452.2 281 75.4
Nn3g17764 Nelumbo nucifera HOM05D004993 ORTHO05D008532 1.7e-124 449.9 338 66.6
Prupe.1G306400 Prunus persica HOM05D004993 ORTHO05D008532 1.7e-124 449.9 326 69.3
FvH4_4g27971 Fragaria vesca HOM05D004993 ORTHO05D008532 2.3e-124 449.5 346 66.5
Gohir.A12G169600 Gossypium hirsutum HOM05D004993 ORTHO05D008532 2.3e-124 449.5 314 70.1
MD16G1046900 Malus domestica HOM05D004993 ORTHO05D008532 3.0e-124 449.1 321 70.7
TAR371G0197 Trochodendron aralioides HOM05D004993 ORTHO05D008532 3.9e-124 448.7 338 66.0
Nitab4.5_0000582g0040 Nicotiana tabacum HOM05D004993 ORTHO05D008532 5.1e-124 448.4 342 67.3
CSS0044433 Camellia sinensis var. sinensis HOM05D004993 ORTHO05D008532 6.6e-124 448.0 341 68.6
VMungo1215G2957 Vigna mungo HOM05D004993 ORTHO05D008532 6.6e-124 448.0 307 73.9
COL.COLO4_07879 Corchorus olitorius HOM05D004993 ORTHO05D008532 8.6e-124 447.6 315 69.5
PGR102G1294 Punica granatum HOM05D004993 ORTHO05D008532 1.1e-123 447.2 339 65.8
Phvul.003G028100 Phaseolus vulgaris HOM05D004993 ORTHO05D008532 2.5e-123 446.0 323 70.9
Gohir.A12G170200 Gossypium hirsutum HOM05D004993 ORTHO05D008532 3.3e-123 445.7 341 65.4
Manes.14G098500 Manihot esculenta HOM05D004993 ORTHO05D008532 5.6e-123 444.9 322 68.3
Glyma.02G098700 Glycine max HOM05D004993 ORTHO05D008532 7.3e-123 444.5 314 70.7
Lalb_Chr17g0341941 Lupinus albus HOM05D004993 ORTHO05D008532 9.6e-123 444.1 279 75.6
FAN07G2608 Fragaria x ananassa HOM05D004993 ORTHO05D008532 2.1e-122 443.0 345 65.8
CANSAT64G2606 Cannabis sativa HOM05D004993 ORTHO05D008532 2.8e-122 442.6 329 69.0
TWI31G0395 Tripterygium wilfordii HOM05D004993 ORTHO05D008532 3.6e-122 442.2 340 66.8
CAN.G630.88 Capsicum annuum HOM05D004993 ORTHO05D008532 4.7e-122 441.8 343 66.8
RcHm_v2.0_Chr4g0435691 Rosa chinensis HOM05D004993 ORTHO05D008532 4.7e-122 441.8 331 67.7
SalBow8G3546 Salvia bowleyana HOM05D004993 ORTHO05D008532 8.1e-122 441.0 342 65.8
Lj2g0001269 Lotus japonicus HOM05D004993 ORTHO05D008532 1.4e-121 440.3 279 74.6
arahy.Tifrunner.gnm1.ann1.VJ59XU Arachis hypogaea HOM05D004993 ORTHO05D008532 1.8e-121 439.9 344 65.7
Sc04g0006640 Simmondsia chinensis HOM05D004993 ORTHO05D008532 2.4e-121 439.5 310 71.9
GSVIVG01011941001 Vitis vinifera HOM05D004993 ORTHO05D008532 2.4e-121 439.5 340 67.1
Potri.008G117600 Populus trichocarpa HOM05D004993 ORTHO05D008532 5.2e-121 438.3 324 68.5
arahy.Tifrunner.gnm1.ann1.5ZE4QE Arachis hypogaea HOM05D004993 ORTHO05D008532 6.8e-121 438.0 344 65.4
Duzib251G0893 Durio zibethinus HOM05D004993 ORTHO05D008532 2.0e-120 436.4 354 63.6
THA.LOC104808209 Tarenaya hassleriana HOM05D004993 ORTHO05D008532 2.0e-120 436.4 336 63.4
FAN17G0685 Fragaria x ananassa HOM05D004993 ORTHO05D008532 2.6e-120 436.0 282 74.1
MELO3C012219.2 Cucumis melo HOM05D004993 ORTHO05D008532 5.8e-120 434.9 340 65.0
Dinv16501 Davidia involucrata HOM05D004993 ORTHO05D008532 5.8e-120 434.9 317 70.0
Migut.O00833 Erythranthe guttata HOM05D004993 ORTHO05D008532 5.8e-120 434.9 281 74.0
Haze_17449 Corylus avellana HOM05D004993 ORTHO05D008532 7.6e-120 434.5 375 61.3
CsaV3_5G034030 Cucumis sativus L. HOM05D004993 ORTHO05D008532 9.9e-120 434.1 320 67.8
Ciclev10031998m.g Citrus clementina HOM05D004993 ORTHO05D008532 1.7e-119 433.3 314 68.2
Aa31LG6G5980 Aethionema arabicum HOM05D004993 ORTHO05D008532 1.1e-118 430.6 327 65.4
AUR62002913 Chenopodium quinoa HOM05D004993 ORTHO05D008532 1.6e-117 426.8 349 63.3
MBI16_g25106_MAGBIO Magnolia biondii HOM05D004993 ORTHO05D008532 1.6e-117 426.8 280 71.8
Solyc03g111700.3 Solanum lycopersicum HOM05D004993 ORTHO05D008532 2.1e-117 426.4 338 66.0
TPR.G38312 Trifolium pratense HOM05D004993 ORTHO05D008532 2.1e-117 426.4 308 68.5
PSO063G3032 Papaver somniferum HOM05D004993 ORTHO05D008532 4.6e-117 425.2 315 68.6
Sopen03g030820 Solanum pennellii HOM05D004993 ORTHO05D008532 7.8e-117 424.5 338 66.0
AL1G43530 Arabidopsis lyrata HOM05D004993 ORTHO05D008532 1.0e-116 424.1 305 66.6
AT1G29700 Arabidopsis thaliana HOM05D004993 ORTHO05D008532 1.0e-116 424.1 305 66.9
RhsimUnG0136600 Rhododendron simsii HOM05D004993 ORTHO05D008532 1.7e-116 423.3 338 64.5
PGSC0003DMG402001731 Solanum tuberosum HOM05D004993 ORTHO05D008532 1.7e-116 423.3 342 66.1
SGA_v2.0_scaffold209G42027 Striga asiatica HOM05D004993 ORTHO05D008532 2.3e-116 422.9 303 69.3
CARHR029050 Cardamine hirsuta HOM05D004993 ORTHO05D008532 3.0e-116 422.5 305 68.5
Atru.chr11.1340 Acer truncatum HOM05D004993 ORTHO05D008532 3.9e-116 422.2 284 73.6
Aqoxy3G03926 Aquilegia oxysepala HOM05D004993 ORTHO05D008532 6.6e-116 421.4 333 62.2
AUR62035273 Chenopodium quinoa HOM05D004993 ORTHO05D008532 8.7e-116 421.0 305 68.2
BcaB03g12171 Brassica carinata HOM05D004993 ORTHO05D008532 1.1e-115 420.6 325 63.1
unitig_8.g3446 Utricularia gibba HOM05D004993 ORTHO05D008532 1.1e-115 420.6 277 72.2
vmacro01368 Vaccinium macrocarpon HOM05D004993 ORTHO05D008532 1.1e-115 420.6 385 60.0
QL01p044817 Quercus lobata HOM05D004993 ORTHO05D008532 3.3e-115 419.1 317 66.6
C03p76040 Brassica napus HOM05D004993 ORTHO05D008532 5.6e-115 418.3 325 62.2
EL10Ac6g14467 Beta vulgaris HOM05D004993 ORTHO05D008532 9.6e-115 417.5 323 65.0
A08p24930 Brassica napus HOM05D004993 ORTHO05D008532 9.6e-115 417.5 325 62.2
BolC3t19860H Brassica oleracea HOM05D004993 ORTHO05D008532 9.6e-115 417.5 325 61.8
BcaC01g00125 Brassica carinata HOM05D004993 ORTHO05D008532 3.6e-114 415.6 325 61.8
BraA08t34448Z Brassica rapa HOM05D004993 ORTHO05D008532 4.8e-114 415.2 325 61.8
Carub.0001s2791 Capsella rubella HOM05D004993 ORTHO05D008532 6.2e-114 414.8 335 62.4
Sp1g25580 Schrenkiella parvula HOM05D004993 ORTHO05D008532 2.4e-113 412.9 325 62.5
Sed0024124 Sechium edule HOM05D004993 ORTHO05D008532 5.3e-113 411.8 339 63.4
CSS0008970 Camellia sinensis var. sinensis HOM05D004993 ORTHO05D008532 2.6e-112 409.5 347 62.8
Peaxi162Scf00004g01611 Petunia axillaris HOM05D004993 ORTHO05D008532 5.8e-112 408.3 279 71.0
Sabra08G0089200 Salix brachista HOM05D004993 ORTHO05D008532 7.1e-110 401.4 301 68.1
Medtr5g054360 Medicago truncatula HOM05D004993 ORTHO05D008532 2.7e-109 399.4 317 64.4
Hund05759 Selenicereus undatus HOM05D000924 ORTHO05D001209 2.5e-107 392.9 395 53.4
Eucgr.B03043 Eucalyptus grandis HOM05D004993 ORTHO05D008532 3.6e-106 389.0 315 62.2
CDE04G2310 Ceratophyllum demersum HOM05D004993 ORTHO05D008532 4.5e-104 382.1 334 62.0
ATR0681G095 Amborella trichopoda HOM05D004993 ORTHO05D008532 2.9e-103 379.4 347 56.2
HPP92_005309 Vanilla planifolia HOM05D004993 ORTHO05D008532 7.1e-102 374.8 274 65.7
PSO782G1223 Papaver somniferum HOM05D004993 ORTHO05D008532 3.9e-100 369.0 315 61.9
Nitab4.5_0004719g0040 Nicotiana tabacum HOM05D004993 ORTHO05D008532 8.7e-100 367.9 342 58.5
Thhalv10009499m.g Eutrema salsugineum HOM05D004993 ORTHO05D008532 5.5e-94 348.6 320 56.6
Mapoly0053s0088 Marchantia polymorpha HOM05D004993 ORTHO05D008532 3.0e-92 342.8 294 56.1
SMO361G0287 Selaginella moellendorffii HOM05D004993 ORTHO05D008532 5.7e-91 338.6 258 59.3
Ah.02g127080 Amaranthus hybridus HOM05D004993 ORTHO05D008532 6.1e-85 318.5 347 53.6
Os12g0641300 Oryza sativa ssp. japonica HOM05D004993 ORTHO05D008532 6.1e-85 318.5 272 59.6
AagrBONN_evm.TU.Sc2ySwM_344.778 Anthoceros agrestis HOM05D004993 ORTHO05D008532 1.5e-83 313.9 273 56.8
CiPaw.15G004200 Carya illinoinensis HOM05D004993 ORTHO05D008532 4.3e-83 312.4 324 54.9
MD13G1045600 Malus domestica HOM05D004993 ORTHO05D008532 6.3e-82 308.5 320 53.1
Pp3c15_25860 Physcomitrium patens HOM05D004993 ORTHO05D008532 6.3e-82 308.5 262 54.2
Zm00001eb133920 Zea mays HOM05D004993 ORTHO05D008532 1.1e-78 297.7 292 55.1
Migut.L01091 Erythranthe guttata HOM05D004993 ORTHO05D008532 4.8e-74 282.3 157 82.2
Psat2g091800 Pisum sativum HOM05D004993 ORTHO05D008532 3.7e-66 256.1 225 59.6
Actinidia38387 Actinidia chinensis HOM05D004993 ORTHO05D008532 5.5e-62 242.3 147 74.8
Hma1.2p1_0862F.1_g229960 Hydrangea macrophylla HOM05D004993 ORTHO05D008532 5.7e-59 232.3 134 80.6
Ca_20419_v3 Cicer arietinum L. HOM05D004993 ORTHO05D008532 2.0e-56 223.8 135 78.5
ECA248G2500 Erigeron canadensis HOM05D004993 ORTHO05D008532 1.3e-55 221.1 280 47.9
CBR_g46806 Chara braunii HOM05D004993 ORTHO05D008532 1.5e-54 217.6 283 40.3
Cpa.g.c35723 Carica papaya HOM05D004993 ORTHO05D008532 1.0e-52 211.5 134 70.9
SEGI_28994 Sequoiadendron giganteum HOM05D004993 ORTHO05D008532 5.7e-43 179.1 134 58.2
Actinidia13671 Actinidia chinensis HOM05D004993 ORTHO05D008532 1.0e-39 168.3 98 80.6
MCO14G082 Micromonas commoda HOM05D004993 ORTHO05D008532 5.0e-31 139.4 298 34.6
Pp3c27_8380 Physcomitrium patens HOM05D004993 ORTHO05D008532 4.3e-30 136.3 293 32.8
Cre10.g442950 Chlamydomonas reinhardtii HOM05D004993 ORTHO05D008532 2.0e-27 127.5 333 29.1
CARHR029040 Cardamine hirsuta HOM05D004993 ORTHO05D008532 3.9e-15 86.7 101 46.5
SEGI_13194 Sequoiadendron giganteum HOM05D004993 ORTHO05D008532 9.5e-14 82.0 78 53.8
Migut.G01033 Erythranthe guttata HOM05D004993 ORTHO05D008532 1.2e-08 65.1 50 54.0


User provided reference genes

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