Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr16g0504431 Helianthus annuus HOM05D007533 ORTHO05D009622 6.8e-38 160.2 84 100.0
HanXRQChr17g0567331 Helianthus annuus HOM05D007533 ORTHO05D009622 6.8e-38 160.2 84 100.0
HanXRQMTg0579131 Helianthus annuus HOM05D007533 ORTHO05D009622 6.8e-38 160.2 84 100.0
Lsat_1_v5_gn_0_35060 Lactuca sativa HOM05D007533 ORTHO05D009622 3.4e-37 157.9 84 98.8
HanXRQChr09g0253411 Helianthus annuus HOM05D007533 ORTHO05D009622 5.7e-37 157.1 84 98.8
DCAR_032459 Daucus carota HOM05D007533 ORTHO05D009622 1.8e-35 152.1 81 97.5
CANSAT16G0029 Cannabis sativa HOM05D007533 ORTHO05D009622 7.0e-35 150.2 81 96.3
CsaV3_UNG210000 Cucumis sativus L. HOM05D007533 ORTHO05D009622 7.0e-35 150.2 81 96.3
Sed0020832 Sechium edule HOM05D007533 ORTHO05D009622 9.2e-35 149.8 81 96.3
Ah.02g111570 Amaranthus hybridus HOM05D007533 ORTHO05D009622 2.0e-34 148.7 81 95.1
Ah.10g028150 Amaranthus hybridus HOM05D007533 ORTHO05D009622 2.0e-34 148.7 81 95.1
Aqoxy23s008 Aquilegia oxysepala HOM05D007533 ORTHO05D009622 2.0e-34 148.7 80 95.0
Lj2P1223T74 Lonicera japonica HOM05D007533 ORTHO05D009622 2.7e-34 148.3 81 95.1
Lj2P1228T84 Lonicera japonica HOM05D007533 ORTHO05D009622 2.7e-34 148.3 81 95.1
Lj2P1231T101 Lonicera japonica HOM05D007533 ORTHO05D009622 2.7e-34 148.3 81 95.1
Gorai.001G167400 Gossypium raimondii HOM05D007533 ORTHO05D009622 3.5e-34 147.9 81 95.1
Nn1g09978 Nelumbo nucifera HOM05D007533 ORTHO05D009622 4.6e-34 147.5 80 95.0
Nn1g10040 Nelumbo nucifera HOM05D007533 ORTHO05D009622 4.6e-34 147.5 80 95.0
Aqoxy1G02967 Aquilegia oxysepala HOM05D007533 ORTHO05D009622 5.9e-34 147.1 80 93.8
Hma1.2p1_0136F.1_g062009 Hydrangea macrophylla HOM05D007533 ORTHO05D009622 5.9e-34 147.1 81 95.1
AUR62042328 Chenopodium quinoa HOM05D007533 ORTHO05D009622 5.0e-33 144.1 79 94.9
RcHm_v2.0_MTg0498351 Rosa chinensis HOM05D007533 ORTHO05D009622 6.6e-33 143.7 81 92.6
MSTRG.26054 Avicennia marina HOM05D007533 ORTHO05D009622 1.1e-32 142.9 81 91.4
unitig_87.g27950 Utricularia gibba HOM05D007533 ORTHO05D009622 8.0e-31 136.7 89 82.0
MBI05_g05359_MAGBIO Magnolia biondii HOM05D007533 ORTHO05D009622 2.3e-30 135.2 73 93.2
Lsat_1_v5_gn_1_118900 Lactuca sativa HOM05D007533 ORTHO05D009622 3.1e-30 134.8 73 94.5
QL12p027939 Quercus lobata HOM05D007533 ORTHO05D009622 7.0e-27 123.6 71 87.3
Lalb_Chr00c21g0405841 Lupinus albus HOM05D007533 ORTHO05D009622 3.5e-26 121.3 81 80.2
Lalb_Chr00c24g0407011 Lupinus albus HOM05D007533 ORTHO05D009622 3.5e-26 121.3 81 80.2
ATR0155G001 Amborella trichopoda HOM05D007533 ORTHO05D009622 1.7e-25 119.0 63 95.2
SHI19535 Sapria himalayana HOM05D000105 ORTHO05D000023 1.7e-25 119.0 77 81.8
Potri.007G061641 Populus trichocarpa HOM05D007533 ORTHO05D009622 2.3e-25 118.6 81 79.0
Potri.007G062602 Populus trichocarpa HOM05D007533 ORTHO05D009622 2.3e-25 118.6 81 79.0
SabraMtG0004200 Salix brachista HOM05D007533 ORTHO05D009622 2.3e-25 118.6 81 79.0
LjContig00439g0010342 Lotus japonicus HOM05D007533 ORTHO05D009622 8.6e-25 116.7 81 77.8
LjContig00439g0021951 Lotus japonicus HOM05D007533 ORTHO05D009622 8.6e-25 116.7 81 77.8
TPR.G21214 Trifolium pratense HOM05D007533 ORTHO05D009622 8.6e-25 116.7 81 77.8
Gohir.D01G116666 Gossypium hirsutum HOM05D007533 ORTHO05D009622 1.9e-24 115.5 65 90.8
Solyc00g500302.1 Solanum lycopersicum HOM05D007533 ORTHO05D009622 2.5e-24 115.2 81 75.3
Solyc11g063573.1 Solanum lycopersicum HOM05D007533 ORTHO05D009622 2.5e-24 115.2 81 75.3
PGSC0003DMG400026520 Solanum tuberosum HOM05D007533 ORTHO05D009622 2.5e-24 115.2 81 75.3
Glyma.17G185600 Glycine max HOM05D007533 ORTHO05D009622 4.3e-24 114.4 81 76.5
Solyc00g500173.1 Solanum lycopersicum HOM05D007533 ORTHO05D009622 1.6e-23 112.5 81 74.1
Nitab4.5_0012599g0080 Nicotiana tabacum HOM05D007533 ORTHO05D009622 2.1e-23 112.1 81 74.1
CAN.G2446.3 Capsicum annuum HOM05D007533 ORTHO05D009622 3.6e-23 111.3 81 74.1
CAN.G2792.1 Capsicum annuum HOM05D007533 ORTHO05D009622 3.6e-23 111.3 81 74.1
Lj2P1226T70 Lonicera japonica HOM05D007533 ORTHO05D009622 3.6e-23 111.3 57 96.5
Dinv06666 Davidia involucrata HOM05D007533 ORTHO05D009622 4.7e-23 110.9 57 96.5
Nitab4.5_0010033g0020 Nicotiana tabacum HOM05D007533 ORTHO05D009622 4.7e-23 110.9 81 74.1
Sopen00g001050 Solanum pennellii HOM05D007533 ORTHO05D009622 8.1e-23 110.2 81 72.8
Nitab4.5_0010333g0060 Nicotiana tabacum HOM05D007533 ORTHO05D009622 5.2e-22 107.5 79 72.2
ATMG00640 Arabidopsis thaliana HOM05D007533 ORTHO05D009622 6.8e-22 107.1 81 72.8
Thhalv10023156m.g Eutrema salsugineum HOM05D007533 ORTHO05D009622 8.9e-22 106.7 81 72.8
CAN.G1001.31 Capsicum annuum HOM05D007533 ORTHO05D009622 1.2e-21 106.3 81 70.4
Peaxi162Scf00651g00636 Petunia axillaris HOM05D007533 ORTHO05D009622 1.5e-21 105.9 81 69.1
AL9U10720 Arabidopsis lyrata HOM05D007533 ORTHO05D009622 2.0e-21 105.5 81 71.6
CARHR283000 Cardamine hirsuta HOM05D007533 ORTHO05D009622 3.4e-21 104.8 81 71.6
Nitab4.5_0010333g0120 Nicotiana tabacum HOM05D007533 ORTHO05D009622 3.4e-21 104.8 79 70.9
A04p09330 Brassica napus HOM05D007533 ORTHO05D009622 4.4e-21 104.4 76 75.0
BolSC28t60309H Brassica oleracea HOM05D007533 ORTHO05D009622 4.4e-21 104.4 76 75.0
BolSC28t60365H Brassica oleracea HOM05D007533 ORTHO05D009622 4.4e-21 104.4 76 75.0
BraSC48t46232Z Brassica rapa HOM05D007533 ORTHO05D009622 4.4e-21 104.4 76 75.0
BraSC48t46320Z Brassica rapa HOM05D007533 ORTHO05D009622 4.4e-21 104.4 76 75.0
arahy.Tifrunner.gnm1.ann1.6ILC2A Arachis hypogaea HOM05D007533 ORTHO05D009622 5.8e-21 104.0 73 75.3
arahy.Tifrunner.gnm1.ann1.R8TWAM Arachis hypogaea HOM05D007533 ORTHO05D009622 5.8e-21 104.0 73 75.3
PGSC0003DMG400030942 Solanum tuberosum HOM05D007533 ORTHO05D009622 5.8e-21 104.0 81 66.7
AL6G41410 Arabidopsis lyrata HOM05D007533 ORTHO05D009622 8.3e-20 100.1 76 72.4
C01p34790 Brassica napus HOM05D007533 ORTHO05D009622 1.9e-19 99.0 76 71.1
Oeu041867.1 Olea europaea HOM05D007533 ORTHO05D009622 3.2e-19 98.2 61 82.0
SalBow1G6690 Salvia bowleyana HOM05D007533 ORTHO05D009622 3.0e-17 91.7 51 88.2
arahy.Tifrunner.gnm1.ann1.2HU8EJ Arachis hypogaea HOM05D002660 ORTHO05D009622 3.6e-15 84.7 47 91.5
arahy.Tifrunner.gnm1.ann1.PN90EB Arachis hypogaea HOM05D007533 ORTHO05D009622 3.6e-15 84.7 47 91.5
Aa31csc1168G30 Aethionema arabicum HOM05D007533 ORTHO05D009622 1.1e-14 83.2 47 89.4
Peaxi162Scf01098g00002 Petunia axillaris HOM05D007533 ORTHO05D009622 1.1e-14 83.2 47 87.2
RhsimMtG0003100 Rhododendron simsii HOM05D007194 ORTHO05D009182 1.1e-14 83.2 44 95.5
RhsimMtG0007900 Rhododendron simsii HOM05D007194 ORTHO05D009182 1.1e-14 83.2 44 95.5
Aqoxy12s024 Aquilegia oxysepala HOM05D007533 ORTHO05D009622 1.4e-14 82.8 43 95.3
CARHR288330 Cardamine hirsuta HOM05D007533 ORTHO05D009622 5.2e-14 80.9 44 93.2
Ca_07436_v3 Cicer arietinum L. HOM05D004537 ORTHO05D005492 5.2e-14 80.9 44 93.2
CDE02G4305 Ceratophyllum demersum HOM05D007533 ORTHO05D009622 3.4e-13 78.2 47 83.0
Ca_07440_v3 Cicer arietinum L. HOM05D007194 ORTHO05D009182 1.3e-12 76.3 44 90.9
SHI34934 Sapria himalayana HOM05D004909 ORTHO05D009316 2.9e-12 75.1 63 66.7
GSVIVG01010884001 Vitis vinifera HOM05D007533 ORTHO05D009622 1.4e-11 72.8 42 88.1
Nitab4.5_0000172g2020 Nicotiana tabacum HOM05D007533 ORTHO05D009622 1.2e-10 69.7 81 53.1
Nitab4.5_0000172g1940 Nicotiana tabacum HOM05D007533 ORTHO05D009622 3.0e-09 65.1 73 52.1
Nitab4.5_0000034g0140 Nicotiana tabacum HOM05D007533 ORTHO05D009622 8.7e-09 63.5 53 64.2
Solyc06g042990.1 Solanum lycopersicum HOM05D007533 ORTHO05D009622 8.7e-09 63.5 43 72.1


User provided reference genes

Program Settings