Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr17g0567251 Helianthus annuus HOM05D006477 ORTHO05D008311 2.7e-74 282.0 145 100.0
HanXRQChr15g0495711 Helianthus annuus HOM05D006477 ORTHO05D008311 1.3e-39 166.8 95 93.7
HanXRQChr16g0522681 Helianthus annuus HOM05D006477 ORTHO05D008311 9.0e-38 160.6 92 93.5
Lsat_1_v5_gn_4_40501 Lactuca sativa HOM05D006477 ORTHO05D008311 3.8e-36 155.2 128 70.3
ECA234G3546 Erigeron canadensis HOM05D006477 ORTHO05D008311 4.2e-35 151.8 88 88.6
ECA234G1029 Erigeron canadensis HOM05D006477 ORTHO05D008311 2.7e-34 149.1 88 87.5
Rhsim07G0044200 Rhododendron simsii HOM05D006477 ORTHO05D008311 1.0e-33 147.1 93 83.9
RcHm_v2.0_Chr1g0337021 Rosa chinensis HOM05D006477 ORTHO05D008311 1.0e-33 147.1 89 83.1
Eucgr.E04248 Eucalyptus grandis HOM05D006477 ORTHO05D008311 2.3e-33 146.0 92 82.6
FvH4_7g07070 Fragaria vesca HOM05D006477 ORTHO05D008311 3.9e-33 145.2 88 80.7
MD07G1076600 Malus domestica HOM05D006477 ORTHO05D008311 3.9e-33 145.2 88 84.1
FAN10G2338 Fragaria x ananassa HOM05D006477 ORTHO05D008311 6.7e-33 144.4 88 80.7
Rhsim07G0044700 Rhododendron simsii HOM05D006477 ORTHO05D008311 6.7e-33 144.4 92 82.6
Prupe.2G097300 Prunus persica HOM05D006477 ORTHO05D008311 8.7e-33 144.1 88 83.0
CSS0043287 Camellia sinensis var. sinensis HOM05D006477 ORTHO05D008311 1.1e-32 143.7 92 80.4
Cc02_g26330 Coffea canephora HOM05D006477 ORTHO05D008311 1.1e-32 143.7 92 81.5
TWI59G0878 Tripterygium wilfordii HOM05D006477 ORTHO05D008311 1.1e-32 143.7 90 83.3
CSS0025225 Camellia sinensis var. sinensis HOM05D006477 ORTHO05D008311 1.5e-32 143.3 92 80.4
MELO3C020371.2 Cucumis melo HOM05D006477 ORTHO05D008311 1.5e-32 143.3 92 79.3
Rhsim07G0124700 Rhododendron simsii HOM05D006477 ORTHO05D008311 5.6e-32 141.4 93 80.6
vmacro13578 Vaccinium macrocarpon HOM05D006477 ORTHO05D008311 5.6e-32 141.4 93 80.6
MD02G1240300 Malus domestica HOM05D006477 ORTHO05D008311 7.4e-32 141.0 88 81.8
MBI04_g32195_MAGBIO Magnolia biondii HOM05D006477 ORTHO05D008311 9.6e-32 140.6 88 79.5
ClCG06G008130 Citrullus lanatus HOM05D006477 ORTHO05D008311 1.6e-31 139.8 99 68.7
Nitab4.5_0004594g0090 Nicotiana tabacum HOM05D006477 ORTHO05D008311 1.6e-31 139.8 87 78.2
SGA_v2.0_scaffold120G32938 Striga asiatica HOM05D006477 ORTHO05D008311 1.6e-31 139.8 107 64.5
Actinidia05816 Actinidia chinensis HOM05D006477 ORTHO05D008311 2.8e-31 139.0 91 79.1
Migut.J00830 Erythranthe guttata HOM05D006477 ORTHO05D008311 2.8e-31 139.0 92 78.3
QL05p054895 Quercus lobata HOM05D006477 ORTHO05D008311 2.8e-31 139.0 91 78.0
QL05p056339 Quercus lobata HOM05D006477 ORTHO05D008311 2.8e-31 139.0 91 78.0
FAN06G1803 Fragaria x ananassa HOM05D006477 ORTHO05D008311 3.7e-31 138.7 84 79.8
Hma1.2p1_0915F.1_g236330 Hydrangea macrophylla HOM05D006477 ORTHO05D008311 4.8e-31 138.3 92 79.3
FAN03G3069 Fragaria x ananassa HOM05D006477 ORTHO05D029725 6.2e-31 137.9 84 78.6
Hma1.2p1_2755F.1_g327960 Hydrangea macrophylla HOM05D006477 ORTHO05D008311 6.2e-31 137.9 92 78.3
Nitab4.5_0004800g0020 Nicotiana tabacum HOM05D006477 ORTHO05D008311 8.1e-31 137.5 87 77.0
Cfa003675 Carpinus fangiana HOM05D006477 ORTHO05D008311 1.1e-30 137.1 92 78.3
Actinidia31748 Actinidia chinensis HOM05D006477 ORTHO05D008311 1.4e-30 136.7 90 80.0
Haze_15813 Corylus avellana HOM05D006477 ORTHO05D008311 1.4e-30 136.7 88 78.4
SalBow6G6803 Salvia bowleyana HOM05D006477 ORTHO05D008311 1.4e-30 136.7 89 78.7
Manes.06G016700 Manihot esculenta HOM05D006477 ORTHO05D008311 3.1e-30 135.6 91 75.8
Manes.06G016750 Manihot esculenta HOM05D006477 ORTHO05D008311 3.1e-30 135.6 91 75.8
GSVIVG01001179001 Vitis vinifera HOM05D006477 ORTHO05D008311 5.3e-30 134.8 92 76.1
Gohir.A12G270700 Gossypium hirsutum HOM05D006477 ORTHO05D008311 9.0e-30 134.0 88 75.0
Gohir.D12G271100 Gossypium hirsutum HOM05D006477 ORTHO05D008311 9.0e-30 134.0 88 75.0
Gorai.008G291500 Gossypium raimondii HOM05D006477 ORTHO05D008311 9.0e-30 134.0 88 75.0
PGR042G2475 Punica granatum HOM05D006477 ORTHO05D008311 1.2e-29 133.7 92 75.0
Duzib128G0861 Durio zibethinus HOM05D006477 ORTHO05D008311 1.5e-29 133.3 92 75.0
EL10Ac6g14607 Beta vulgaris HOM05D006477 ORTHO05D008311 2.6e-29 132.5 93 73.1
PGSC0003DMG400001789 Solanum tuberosum HOM05D006477 ORTHO05D008311 2.6e-29 132.5 85 75.3
ATR0829G122 Amborella trichopoda HOM05D006477 ORTHO05D008311 3.4e-29 132.1 88 76.1
CiPaw.03G039600 Carya illinoinensis HOM05D006477 ORTHO05D008311 3.4e-29 132.1 83 79.5
AUR62007820 Chenopodium quinoa HOM05D006477 ORTHO05D008311 4.5e-29 131.7 93 72.0
Aqoxy7G00962 Aquilegia oxysepala HOM05D006477 ORTHO05D008311 5.8e-29 131.3 90 73.3
COL.COLO4_37808 Corchorus olitorius HOM05D006477 ORTHO05D008311 1.3e-28 130.2 88 75.0
MBI04_g32196_MAGBIO Magnolia biondii HOM05D006477 ORTHO05D008311 1.3e-28 130.2 86 75.6
Thecc.07G155600 Theobroma cacao HOM05D006477 ORTHO05D008311 1.7e-28 129.8 93 73.1
CAN.G700.29 Capsicum annuum HOM05D006477 ORTHO05D008311 2.9e-28 129.0 83 73.5
Solyc01g081120.2 Solanum lycopersicum HOM05D006477 ORTHO05D008311 2.9e-28 129.0 85 71.8
Sopen01g032730 Solanum pennellii HOM05D006477 ORTHO05D008311 2.9e-28 129.0 85 71.8
COL.COLO4_15215 Corchorus olitorius HOM05D006477 ORTHO05D008311 3.8e-28 128.6 88 73.9
Potri.005G094100 Populus trichocarpa HOM05D006477 ORTHO05D008311 4.9e-28 128.3 87 74.7
arahy.Tifrunner.gnm1.ann1.2E1B03 Arachis hypogaea HOM05D006477 ORTHO05D008311 6.4e-28 127.9 96 66.7
Aqoxy6G02884 Aquilegia oxysepala HOM05D006477 ORTHO05D008311 3.2e-27 125.6 90 70.0
arahy.Tifrunner.gnm1.ann1.B2599V Arachis hypogaea HOM05D006477 ORTHO05D008311 4.2e-27 125.2 89 69.7
SHI34920 Sapria himalayana HOM05D006477 ORTHO05D008311 7.1e-27 124.4 89 69.7
Ciclev10023972m.g Citrus clementina HOM05D006477 ORTHO05D008311 1.6e-26 123.2 88 71.6
QL05p056259 Quercus lobata HOM05D006477 ORTHO05D008311 2.1e-26 122.9 83 75.9
unitig_27.g24761 Utricularia gibba HOM05D006477 ORTHO05D008311 6.0e-26 121.3 83 71.1
Aqoxy7G00965 Aquilegia oxysepala HOM05D006477 ORTHO05D008311 1.0e-25 120.6 84 72.6
QL03p061357 Quercus lobata HOM05D006477 ORTHO05D008311 1.0e-25 120.6 89 71.9
Ca_18942_v3 Cicer arietinum L. HOM05D006477 ORTHO05D008311 1.8e-25 119.8 87 69.0
Glyma.12G115400 Glycine max HOM05D006477 ORTHO05D008311 1.8e-25 119.8 83 71.1
Lalb_Chr25g0285311 Lupinus albus HOM05D006477 ORTHO05D008311 1.8e-25 119.8 91 65.9
Phvul.010G094300 Phaseolus vulgaris HOM05D006477 ORTHO05D008311 1.8e-25 119.8 83 69.9
HPP92_026480 Vanilla planifolia HOM05D006477 ORTHO05D008311 1.8e-25 119.8 87 69.0
Glyma.06G291500 Glycine max HOM05D006477 ORTHO05D008311 2.3e-25 119.4 89 68.5
Zm00001eb326860 Zea mays HOM05D006477 ORTHO05D008311 2.3e-25 119.4 88 70.5
Os02g0695700 Oryza sativa ssp. japonica HOM05D006477 ORTHO05D008311 3.0e-25 119.0 86 69.8
TPR.G24136 Trifolium pratense HOM05D006477 ORTHO05D008311 3.0e-25 119.0 88 67.0
Phvul.011G119800 Phaseolus vulgaris HOM05D006477 ORTHO05D008311 3.9e-25 118.6 81 69.1
Aqoxy5G03392 Aquilegia oxysepala HOM05D006477 ORTHO05D008311 8.7e-25 117.5 79 72.2
Lj1g0022259 Lotus japonicus HOM05D006477 ORTHO05D008311 8.7e-25 117.5 91 67.0
Cpa.g.sc53.139 Carica papaya HOM05D006477 ORTHO05D008311 1.1e-24 117.1 80 72.5
Sabra05G0077900 Salix brachista HOM05D006477 ORTHO05D008311 1.5e-24 116.7 83 72.3
TPR.G19239 Trifolium pratense HOM05D006477 ORTHO05D008311 1.9e-24 116.3 83 66.3
Medtr4g078485 Medicago truncatula HOM05D006477 ORTHO05D008311 7.4e-24 114.4 89 67.4
Zm00001eb251360 Zea mays HOM05D006477 ORTHO05D008311 9.6e-24 114.0 91 65.9
CsaV3_2G011040 Cucumis sativus L. HOM05D006477 ORTHO05D008311 8.2e-23 110.9 75 74.7
SEGI_06535 Sequoiadendron giganteum HOM05D006477 ORTHO05D008311 1.4e-22 110.2 89 62.9
THA.LOC104823802 Tarenaya hassleriana HOM05D006477 ORTHO05D008311 9.0e-22 107.5 83 65.1
Atru.chr3.3240 Acer truncatum HOM05D006477 ORTHO05D008311 2.6e-21 105.9 87 63.2
CSS0008051 Camellia sinensis var. sinensis HOM05D006477 ORTHO05D008311 2.6e-21 105.9 88 63.6
PSO017G7014 Papaver somniferum HOM05D006477 ORTHO05D008311 5.8e-21 104.8 72 73.6
Mapoly0009s0212 Marchantia polymorpha HOM05D006477 ORTHO05D008311 2.2e-20 102.8 83 61.4
Os04g0624900 Oryza sativa ssp. japonica HOM05D006477 ORTHO05D008311 6.5e-20 101.3 79 64.6
Pp3c3_2840 Physcomitrium patens HOM05D006477 ORTHO05D008311 1.4e-19 100.1 84 60.7
Peaxi162Scf00592g00428 Petunia axillaris HOM05D000001 ORTHO05D000003 2.5e-19 99.4 65 72.3
A07p34050 Brassica napus HOM05D006477 ORTHO05D008311 3.2e-19 99.0 111 44.1
Carub.0002s1025 Capsella rubella HOM05D006477 ORTHO05D008311 4.2e-19 98.6 82 58.5
AL2G19670 Arabidopsis lyrata HOM05D006477 ORTHO05D008311 5.5e-19 98.2 82 58.5
AT1G65032 Arabidopsis thaliana HOM05D006477 ORTHO05D008311 1.6e-18 96.7 82 57.3
Sp5g22520 Schrenkiella parvula HOM05D006477 ORTHO05D008311 3.5e-18 95.5 82 56.1
Thhalv10019379m.g Eutrema salsugineum HOM05D006477 ORTHO05D008311 4.6e-18 95.1 82 56.1
BcaNung05073 Brassica carinata HOM05D006477 ORTHO05D008311 6.0e-18 94.7 82 54.9
C06p42740 Brassica napus HOM05D006477 ORTHO05D008311 1.0e-17 94.0 82 54.9
C06p42790 Brassica napus HOM05D006477 ORTHO05D008311 1.0e-17 94.0 82 54.9
BolC6t39165H Brassica oleracea HOM05D006477 ORTHO05D008311 1.0e-17 94.0 82 54.9
BraA07t31031Z Brassica rapa HOM05D006477 ORTHO05D008311 2.3e-17 92.8 99 48.5
DCAR_024347 Daucus carota HOM05D006477 ORTHO05D008311 2.3e-17 92.8 61 82.0
C06p41870 Brassica napus HOM05D006477 ORTHO05D008311 6.7e-17 91.3 82 53.7
BolC6t39243H Brassica oleracea HOM05D006477 ORTHO05D008311 6.7e-17 91.3 82 53.7
Thhalv10019610m.g Eutrema salsugineum HOM05D006477 ORTHO05D008311 2.9e-12 75.9 68 54.4
Sc21g0001600 Simmondsia chinensis HOM05D006477 ORTHO05D008311 6.5e-12 74.7 49 69.4
Rhsim13G0110700 Rhododendron simsii HOM05D006477 ORTHO05D008311 1.1e-11 73.9 50 72.0
BcaC08g46243 Brassica carinata HOM05D006477 ORTHO05D008311 1.4e-11 73.6 82 47.6
Sed0027346 Sechium edule HOM05D006477 ORTHO05D008311 1.4e-11 73.6 52 73.1
SGA_v2.0_scaffold195G40833 Striga asiatica HOM05D006477 ORTHO05D404429 1.9e-11 73.2 98 50.0
Psat7g168960 Pisum sativum HOM05D006477 ORTHO05D008311 4.2e-11 72.0 67 59.7
MBI16_g31701_MAGBIO Magnolia biondii HOM05D006477 ORTHO05D008311 1.6e-10 70.1 57 66.7
Psat0s466g0120 Pisum sativum HOM05D006477 ORTHO05D008311 4.6e-10 68.6 57 61.4
BcaB03g15190 Brassica carinata HOM05D006477 ORTHO05D008311 6.1e-10 68.2 82 46.3
arahy.Tifrunner.gnm1.ann1.HM6XW1 Arachis hypogaea HOM05D006477 ORTHO05D008311 1.0e-09 67.4 72 51.4
PSO017G6472 Papaver somniferum HOM05D006477 ORTHO05D008311 2.8e-07 59.3 66 53.0
PSO017G6604 Papaver somniferum HOM05D006477 ORTHO05D008311 2.8e-07 59.3 66 53.0


User provided reference genes

Program Settings