Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr17g0567181 Helianthus annuus HOM05D064713 ORTHO05D219815 6.1e-89 330.9 176 100.0
HanXRQChr03g0062381 Helianthus annuus HOM05D064713 ORTHO05D224198 7.8e-60 234.2 140 92.1
HanXRQChr15g0472411 Helianthus annuus HOM05D003455 ORTHO05D004165 3.0e-11 72.8 59 62.7
HanXRQChr17g0546121 Helianthus annuus HOM05D003455 ORTHO05D004165 4.3e-10 68.9 59 57.6
Lsat_1_v5_gn_2_89540 Lactuca sativa HOM05D003455 ORTHO05D004165 2.1e-09 66.6 80 47.5
Lj4A121T77 Lonicera japonica HOM05D003455 ORTHO05D004165 1.1e-08 64.3 80 43.8
Lsat_1_v5_gn_3_95981 Lactuca sativa HOM05D003455 ORTHO05D004165 1.4e-08 63.9 59 54.2
ECA238G0586 Erigeron canadensis HOM05D003455 ORTHO05D004165 1.8e-08 63.5 80 43.8
Nitab4.5_0000212g0320 Nicotiana tabacum HOM05D003455 ORTHO05D004165 4.0e-08 62.4 87 43.7
CSS0027598 Camellia sinensis var. sinensis HOM05D003455 ORTHO05D004165 5.3e-08 62.0 59 52.5
CSS0034610 Camellia sinensis var. sinensis HOM05D003455 ORTHO05D004165 5.3e-08 62.0 59 52.5
ECA246G2096 Erigeron canadensis HOM05D003455 ORTHO05D004165 5.3e-08 62.0 59 57.6
Ciclev10011854m.g Citrus clementina HOM05D003455 ORTHO05D004165 6.9e-08 61.6 59 52.5
Duzib264G0955 Durio zibethinus HOM05D003455 ORTHO05D004165 6.9e-08 61.6 80 42.5
Gohir.A09G008600 Gossypium hirsutum HOM05D003455 ORTHO05D004165 6.9e-08 61.6 60 50.0
Thecc.04G097900 Theobroma cacao HOM05D003455 ORTHO05D004165 6.9e-08 61.6 59 52.5
Cc07_g04370 Coffea canephora HOM05D003455 ORTHO05D004165 9.0e-08 61.2 80 42.5
Nitab4.5_0003932g0020 Nicotiana tabacum HOM05D003455 ORTHO05D004165 9.0e-08 61.2 87 43.7
GSVIVG01032900001 Vitis vinifera HOM05D003455 ORTHO05D004165 9.0e-08 61.2 59 50.8
CSS0040085 Camellia sinensis var. sinensis HOM05D003455 ORTHO05D004165 1.2e-07 60.8 80 40.0
HanXRQChr04g0103071 Helianthus annuus HOM05D003455 ORTHO05D004165 1.2e-07 60.8 40 75.0
PGR004G0056 Punica granatum HOM05D003455 ORTHO05D004165 1.5e-07 60.5 59 50.8
DCAR_011034 Daucus carota HOM05D003455 ORTHO05D004165 2.0e-07 60.1 80 43.8
Duzib147G0154 Durio zibethinus HOM05D003455 ORTHO05D004165 2.0e-07 60.1 59 50.8
Atru.chr8.508 Acer truncatum HOM05D003455 ORTHO05D004165 2.6e-07 59.7 59 50.8
ClCG11G004850 Citrullus lanatus HOM05D003455 ORTHO05D004165 2.6e-07 59.7 59 50.8
MELO3C022038.2 Cucumis melo HOM05D003455 ORTHO05D004165 2.6e-07 59.7 59 50.8
CsaV3_5G038560 Cucumis sativus L. HOM05D003455 ORTHO05D004165 2.6e-07 59.7 59 50.8
Nitab4.5_0005596g0050 Nicotiana tabacum HOM05D003455 ORTHO05D004165 2.6e-07 59.7 59 54.2
Sed0017731 Sechium edule HOM05D003455 ORTHO05D004165 2.6e-07 59.7 59 50.8
Gorai.006G009500 Gossypium raimondii HOM05D003455 ORTHO05D004165 3.4e-07 59.3 59 49.2
Nn3g17485 Nelumbo nucifera HOM05D003455 ORTHO05D004165 3.4e-07 59.3 59 45.8
Phvul.004G038200 Phaseolus vulgaris HOM05D003455 ORTHO05D004165 3.4e-07 59.3 80 41.2
Dinv33837 Davidia involucrata HOM05D003455 ORTHO05D004165 4.5e-07 58.9 80 41.2
Actinidia26257 Actinidia chinensis HOM05D003455 ORTHO05D004165 5.8e-07 58.5 80 41.2
TPR.G4293 Trifolium pratense HOM05D003455 ORTHO05D004165 5.8e-07 58.5 80 41.2
vmacro18140 Vaccinium macrocarpon HOM05D003455 ORTHO05D004165 5.8e-07 58.5 80 41.2
Glyma.10G140700 Glycine max HOM05D003455 ORTHO05D004165 7.6e-07 58.2 80 40.0
Hma1.2p1_1555F.1_g290410 Hydrangea macrophylla HOM05D003455 ORTHO05D004165 7.6e-07 58.2 59 47.5
Nitab4.5_0009044g0070 Nicotiana tabacum HOM05D003455 ORTHO05D004165 7.6e-07 58.2 59 52.5
COL.COLO4_02772 Corchorus olitorius HOM05D003455 ORTHO05D004165 9.9e-07 57.8 33 81.8
Gohir.A05G381100 Gossypium hirsutum HOM05D003455 ORTHO05D004165 9.9e-07 57.8 59 47.5
Manes.02G056600 Manihot esculenta HOM05D003455 ORTHO05D004165 9.9e-07 57.8 82 42.7
Peaxi162Scf00166g00342 Petunia axillaris HOM05D003455 ORTHO05D004165 9.9e-07 57.8 59 52.5
Psat1g068920 Pisum sativum HOM05D003455 ORTHO05D004165 9.9e-07 57.8 80 40.0
SGA_v2.0_scaffold154G37123 Striga asiatica HOM05D003455 ORTHO05D004165 9.9e-07 57.8 80 43.8
CAN.G497.93 Capsicum annuum HOM05D003455 ORTHO05D004165 1.3e-06 57.4 33 78.8
Migut.K01264 Erythranthe guttata HOM05D003455 ORTHO05D004165 1.3e-06 57.4 59 49.2
Eucgr.I02041 Eucalyptus grandis HOM05D003455 ORTHO05D004165 1.3e-06 57.4 80 40.0
MBI19_g21275_MAGBIO Magnolia biondii HOM05D003455 ORTHO05D004165 1.3e-06 57.4 57 47.4
Hund17038 Selenicereus undatus HOM05D003455 ORTHO05D004165 1.3e-06 57.4 57 54.4
Aqoxy3G03656 Aquilegia oxysepala HOM05D003455 ORTHO05D004165 1.7e-06 57.0 59 42.4
MSTRG.3364 Avicennia marina HOM05D003455 ORTHO05D004165 1.7e-06 57.0 59 50.8
C03p08220 Brassica napus HOM05D003455 ORTHO05D004165 1.7e-06 57.0 80 40.0
CDE09G0770 Ceratophyllum demersum HOM05D003455 ORTHO05D004165 1.7e-06 57.0 59 49.2
QL02p067326 Quercus lobata HOM05D003455 ORTHO05D004165 1.7e-06 57.0 59 44.1
QL93p0053_1015 Quercus lobata HOM05D003455 ORTHO05D004165 1.7e-06 57.0 59 44.1
MSTRG.15442 Avicennia marina HOM05D003455 ORTHO05D004165 2.2e-06 56.6 59 50.8
Oeu004418.1 Olea europaea HOM05D003455 ORTHO05D004165 2.2e-06 56.6 59 45.8
Phvul.007G207400 Phaseolus vulgaris HOM05D003455 ORTHO05D004165 2.2e-06 56.6 80 38.8
TWI32G0721 Tripterygium wilfordii HOM05D003455 ORTHO05D004165 2.2e-06 56.6 80 40.0
Thhalv10013660m.g Eutrema salsugineum HOM05D003455 ORTHO05D004165 2.9e-06 56.2 80 41.2
Glyma.20G089400 Glycine max HOM05D003455 ORTHO05D004165 2.9e-06 56.2 80 38.8
TWI34G1947 Tripterygium wilfordii HOM05D003455 ORTHO05D004165 2.9e-06 56.2 80 40.0
BraA03t10044Z Brassica rapa HOM05D003455 ORTHO05D004165 3.8e-06 55.8 80 38.8
Gohir.D04G034300 Gossypium hirsutum HOM05D003455 ORTHO05D004165 3.8e-06 55.8 59 47.5
Gorai.012G038600 Gossypium raimondii HOM05D003455 ORTHO05D004165 3.8e-06 55.8 59 47.5
Medtr6g015395 Medicago truncatula HOM05D003455 ORTHO05D004165 3.8e-06 55.8 80 37.5
Peaxi162Scf00563g00315 Petunia axillaris HOM05D003455 ORTHO05D004165 3.8e-06 55.8 80 42.5
Peaxi162Scf00991g00014 Petunia axillaris HOM05D003455 ORTHO05D004165 3.8e-06 55.8 80 42.5
VMungo0720G0561 Vigna mungo HOM05D003455 ORTHO05D004165 3.8e-06 55.8 59 45.8
C09p75580 Brassica napus HOM05D003455 ORTHO05D004165 4.9e-06 55.5 60 48.3
BolC5t35100H Brassica oleracea HOM05D003455 ORTHO05D004165 4.9e-06 55.5 60 48.3
A03p07220 Brassica napus HOM05D003455 ORTHO05D004165 6.4e-06 55.1 80 38.8
BolC3t13319H Brassica oleracea HOM05D003455 ORTHO05D004165 6.4e-06 55.1 80 38.8
Glyma.13G055200 Glycine max HOM05D003455 ORTHO05D004165 6.4e-06 55.1 79 39.2
Sp6g28490 Schrenkiella parvula HOM05D003455 ORTHO05D004165 6.4e-06 55.1 80 38.8
Lj2g0003959 Lotus japonicus HOM05D003455 ORTHO05D004165 8.4e-06 54.7 80 38.8
TAR371G0709 Trochodendron aralioides HOM05D003455 ORTHO05D004165 8.4e-06 54.7 59 42.4


User provided reference genes

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