Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr17g0566951 Helianthus annuus HOM05D007719 ORTHO05D009782 2.2e-238 828.6 414 100.0
ECA234G0976 Erigeron canadensis HOM05D007719 ORTHO05D009782 8.7e-203 710.3 415 85.8
Lsat_1_v5_gn_4_14941 Lactuca sativa HOM05D007719 ORTHO05D009782 1.8e-200 702.6 404 84.4
Dinv05161 Davidia involucrata HOM05D007719 ORTHO05D009782 2.8e-177 625.5 386 78.8
CSS0046068 Camellia sinensis var. sinensis HOM05D007719 ORTHO05D009782 3.6e-172 608.6 417 73.4
Actinidia36679 Actinidia chinensis HOM05D007719 ORTHO05D009782 1.0e-166 590.5 390 74.1
QL01p001957 Quercus lobata HOM05D007719 ORTHO05D009782 2.2e-166 589.3 381 76.4
vmacro10633 Vaccinium macrocarpon HOM05D007719 ORTHO05D009782 5.5e-165 584.7 409 71.1
PGR119G0428 Punica granatum HOM05D007719 ORTHO05D009782 1.2e-164 583.6 377 76.4
TAR629G1042 Trochodendron aralioides HOM05D007719 ORTHO05D009782 1.2e-164 583.6 410 71.2
Gorai.008G166400 Gossypium raimondii HOM05D007719 ORTHO05D009782 1.4e-163 580.1 378 75.7
Lalb_Chr17g0338681 Lupinus albus HOM05D007719 ORTHO05D009782 1.8e-163 579.7 378 75.9
Sopen05g004110 Solanum pennellii HOM05D007719 ORTHO05D009782 1.8e-163 579.7 387 73.4
Gohir.A12G150300 Gossypium hirsutum HOM05D007719 ORTHO05D009782 3.9e-163 578.6 378 75.9
CAN.G1334.8 Capsicum annuum HOM05D007719 ORTHO05D009782 5.1e-163 578.2 395 72.4
FAN12G3181 Fragaria x ananassa HOM05D007719 ORTHO05D009782 1.1e-162 577.0 404 71.5
MD16G1029600 Malus domestica HOM05D007719 ORTHO05D009782 1.5e-162 576.6 393 74.0
Potri.010G114100 Populus trichocarpa HOM05D007719 ORTHO05D009782 1.5e-162 576.6 389 73.0
Solyc05g008270.3 Solanum lycopersicum HOM05D007719 ORTHO05D009782 1.5e-162 576.6 387 73.1
MSTRG.23215 Avicennia marina HOM05D007719 ORTHO05D009782 4.4e-162 575.1 402 71.1
FvH4_4g32280 Fragaria vesca HOM05D007719 ORTHO05D009782 7.4e-162 574.3 396 72.7
CiPaw.05G248600 Carya illinoinensis HOM05D007719 ORTHO05D009782 1.7e-161 573.2 380 74.5
COL.COLO4_20469 Corchorus olitorius HOM05D007719 ORTHO05D009782 1.7e-161 573.2 407 71.0
FAN07G1524 Fragaria x ananassa HOM05D007719 ORTHO05D009782 2.2e-161 572.8 414 68.8
VMungo1215G2618 Vigna mungo HOM05D007719 ORTHO05D009782 2.2e-161 572.8 374 75.1
Rhsim09G0099000 Rhododendron simsii HOM05D007719 ORTHO05D009782 2.8e-161 572.4 375 74.7
Hund24987 Selenicereus undatus HOM05D007719 ORTHO05D009782 3.7e-161 572.0 376 74.5
Eucgr.G02196 Eucalyptus grandis HOM05D007719 ORTHO05D009782 4.8e-161 571.6 361 76.7
Atru.chr11.428 Acer truncatum HOM05D007719 ORTHO05D009782 6.3e-161 571.2 403 70.0
EL10Ac3g06304 Beta vulgaris HOM05D007719 ORTHO05D009782 2.4e-160 569.3 373 75.3
Cc11_g08840 Coffea canephora HOM05D007719 ORTHO05D009782 2.4e-160 569.3 402 70.9
TWI75G0056 Tripterygium wilfordii HOM05D007719 ORTHO05D009782 3.1e-160 568.9 375 75.7
Medtr1g030640 Medicago truncatula HOM05D007719 ORTHO05D009782 5.3e-160 568.2 373 75.1
TPR.G36961 Trifolium pratense HOM05D007719 ORTHO05D009782 5.3e-160 568.2 373 74.5
Psat0s3407g0080 Pisum sativum HOM05D007719 ORTHO05D009782 7.0e-160 567.8 373 75.3
Glyma.09G119300 Glycine max HOM05D007719 ORTHO05D009782 9.1e-160 567.4 383 74.2
FAN22G2057 Fragaria x ananassa HOM05D007719 ORTHO05D009782 1.2e-159 567.0 406 70.0
AUR62002606 Chenopodium quinoa HOM05D007719 ORTHO05D009782 2.0e-159 566.2 383 73.1
AUR62030024 Chenopodium quinoa HOM05D007719 ORTHO05D009782 2.6e-159 565.8 408 70.1
Oeu034423.3 Olea europaea HOM05D007719 ORTHO05D009782 3.5e-159 565.5 438 67.6
RcHm_v2.0_Chr4g0441071 Rosa chinensis HOM05D007719 ORTHO05D009782 3.5e-159 565.5 372 75.0
PGSC0003DMG400030550 Solanum tuberosum HOM05D007719 ORTHO05D009782 3.5e-159 565.5 398 70.1
Sc11g0004120 Simmondsia chinensis HOM05D007719 ORTHO05D009782 1.0e-158 563.9 371 74.9
Phvul.003G022800 Phaseolus vulgaris HOM05D007719 ORTHO05D009782 1.5e-157 560.1 373 74.0
Sed0008286 Sechium edule HOM05D007719 ORTHO05D009782 2.5e-157 559.3 366 74.9
Ah.07g204110 Amaranthus hybridus HOM05D007719 ORTHO05D009782 7.2e-157 557.8 426 68.1
Manes.15G114900 Manihot esculenta HOM05D007719 ORTHO05D009782 7.2e-157 557.8 355 75.8
Nitab4.5_0004776g0060 Nicotiana tabacum HOM05D007719 ORTHO05D009782 9.4e-157 557.4 352 76.4
Lj2g0007830 Lotus japonicus HOM05D007719 ORTHO05D009782 2.7e-156 555.8 361 75.1
HPP92_021852 Vanilla planifolia HOM05D007719 ORTHO05D009782 6.1e-156 554.7 367 73.6
Ca_25710_v3 Cicer arietinum L. HOM05D007719 ORTHO05D009782 8.0e-156 554.3 374 74.3
FAN17G2178 Fragaria x ananassa HOM05D007719 ORTHO05D009782 1.8e-155 553.1 362 74.0
arahy.Tifrunner.gnm1.ann1.Y8VIVB Arachis hypogaea HOM05D007719 ORTHO05D009782 2.3e-155 552.7 368 74.2
DCAR_030215 Daucus carota HOM05D007719 ORTHO05D009782 2.3e-155 552.7 360 75.0
CsaV3_5G028560 Cucumis sativus L. HOM05D007719 ORTHO05D009782 3.0e-155 552.4 396 69.9
SalBow5G1767 Salvia bowleyana HOM05D007719 ORTHO05D009782 8.8e-155 550.8 381 72.4
Migut.O00274 Erythranthe guttata HOM05D007719 ORTHO05D009782 5.7e-154 548.1 384 72.4
ClCG01G006100 Citrullus lanatus HOM05D007719 ORTHO05D009782 1.3e-153 547.0 365 74.0
ATR0686G226 Amborella trichopoda HOM05D007719 ORTHO05D009782 4.8e-153 545.0 369 71.8
Os01g0127400 Oryza sativa ssp. japonica HOM05D007719 ORTHO05D009782 2.0e-151 539.7 356 73.0
SEGI_18275 Sequoiadendron giganteum HOM05D007719 ORTHO05D009782 8.5e-150 534.3 374 69.0
Sabra10G0084100 Salix brachista HOM05D007719 ORTHO05D009782 1.9e-149 533.1 410 65.6
SGA_v2.0_scaffold25G10737 Striga asiatica HOM05D007719 ORTHO05D009782 2.5e-149 532.7 398 70.1
Peaxi162Scf00205g00122 Petunia axillaris HOM05D007719 ORTHO05D009782 5.5e-149 531.6 387 69.8
unitig_61.g26194 Utricularia gibba HOM05D007719 ORTHO05D009782 3.4e-146 522.3 360 73.1
arahy.Tifrunner.gnm1.ann1.L198GP Arachis hypogaea HOM05D007719 ORTHO05D009782 4.4e-146 521.9 367 71.1
Prupe.1G323300 Prunus persica HOM05D007719 ORTHO05D009782 2.9e-142 509.2 330 76.7
Mapoly0070s0076 Marchantia polymorpha HOM05D007719 ORTHO05D009782 2.6e-138 496.1 371 64.7
CDE04G3405 Ceratophyllum demersum HOM05D007719 ORTHO05D009782 4.1e-136 488.8 404 64.6
Pp3c1_3200 Physcomitrium patens HOM05D007719 ORTHO05D009782 1.2e-135 487.3 382 61.8
Actinidia15254 Actinidia chinensis HOM05D007719 ORTHO05D009782 6.6e-134 481.5 384 65.6
SMO236G0033 Selaginella moellendorffii HOM05D007719 ORTHO05D009782 1.8e-131 473.4 347 66.9
SMO236G0110 Selaginella moellendorffii HOM05D007719 ORTHO05D009782 1.8e-131 473.4 347 66.9
MELO3C005317.2 Cucumis melo HOM05D007719 ORTHO05D009782 1.7e-129 466.8 404 60.9
GSVIVG01011772001 Vitis vinifera HOM05D007719 ORTHO05D009782 2.0e-122 443.4 300 75.0
Zm00001eb125300 Zea mays HOM05D007719 ORTHO05D009782 6.4e-121 438.3 355 62.8
Thecc.02G280000 Theobroma cacao HOM05D007719 ORTHO05D009782 2.1e-108 396.7 245 79.2
Cpa.g.sc65.124 Carica papaya HOM05D007719 ORTHO05D009782 3.1e-107 392.9 249 77.1
SMO187G0003 Selaginella moellendorffii HOM05D007719 ORTHO05D009782 5.2e-107 392.1 346 57.8
Gohir.D12G153900 Gossypium hirsutum HOM05D007719 ORTHO05D009782 2.2e-105 386.7 238 79.4
Haze_11019 Corylus avellana HOM05D007719 ORTHO05D009782 5.2e-99 365.5 315 63.2
AagrBONN_evm.TU.Sc2ySwM_228.3777 Anthoceros agrestis HOM05D007719 ORTHO05D009782 2.6e-90 336.7 274 62.8
Cfa008596 Carpinus fangiana HOM05D007719 ORTHO05D009782 1.9e-88 330.5 225 72.0
SEGI_23314 Sequoiadendron giganteum HOM05D007719 ORTHO05D009782 5.3e-83 312.4 231 65.8
CBR_g12440 Chara braunii HOM05D007719 ORTHO05D009782 2.7e-79 300.1 355 45.9
Nn4g24120 Nelumbo nucifera HOM05D007719 ORTHO05D009782 3.0e-78 296.6 174 81.0
Duzib268G0649 Durio zibethinus HOM05D007719 ORTHO05D009782 6.7e-70 268.9 195 68.7
GSVIVG01011775001 Vitis vinifera HOM05D007719 ORTHO05D009782 3.4e-58 229.9 145 78.6
Cfa008597 Carpinus fangiana HOM05D007719 ORTHO05D009782 1.3e-44 184.9 140 65.0
Haze_11018 Corylus avellana HOM05D007719 ORTHO05D009782 1.8e-43 181.0 136 64.0
TPR.G29132 Trifolium pratense HOM05D007719 ORTHO05D009782 1.8e-11 74.7 77 53.2
PGR004G0179 Punica granatum HOM05D007226 ORTHO05D009160 3.6e-07 60.5 85 48.2


User provided reference genes

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