Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr17g0565851 Helianthus annuus HOM05D007374 ORTHO05D009283 6.4e-74 280.8 155 100.0
HanXRQChr01g0028771 Helianthus annuus HOM05D007374 ORTHO05D009283 1.7e-63 246.1 154 89.0
ECA234G2656 Erigeron canadensis HOM05D000461 ORTHO05D001840 5.8e-43 177.9 164 65.9
Lsat_1_v5_gn_4_26980 Lactuca sativa HOM05D007374 ORTHO05D009283 1.7e-34 149.8 132 66.7
HanXRQChr14g0433321 Helianthus annuus HOM05D007374 ORTHO05D009283 1.6e-29 133.3 83 90.4
CAN.G2018.2 Capsicum annuum HOM05D007374 ORTHO05D009283 2.1e-29 132.9 153 52.3
Nitab4.5_0003104g0030 Nicotiana tabacum HOM05D007374 ORTHO05D009283 1.8e-28 129.8 151 51.0
Nitab4.5_0002209g0060 Nicotiana tabacum HOM05D007374 ORTHO05D009283 2.6e-27 125.9 154 50.6
Nn4g26487 Nelumbo nucifera HOM05D007374 ORTHO05D009283 3.8e-26 122.1 147 51.7
COL.COLO4_00303 Corchorus olitorius HOM05D007374 ORTHO05D009283 6.5e-26 121.3 144 52.8
QL08p044444 Quercus lobata HOM05D007374 ORTHO05D009283 8.4e-26 120.9 125 56.8
Sopen10g003640 Solanum pennellii HOM05D007374 ORTHO05D009283 8.4e-26 120.9 152 48.7
RcHm_v2.0_Chr2g0151671 Rosa chinensis HOM05D007374 ORTHO05D009283 1.1e-25 120.6 135 53.3
PGSC0003DMG400021285 Solanum tuberosum HOM05D007374 ORTHO05D009283 3.2e-25 119.0 153 47.7
TAR627G0951 Trochodendron aralioides HOM05D007374 ORTHO05D009283 3.2e-25 119.0 159 49.7
GSVIVG01020866001 Vitis vinifera HOM05D007374 ORTHO05D009283 3.2e-25 119.0 119 58.8
Dinv02438 Davidia involucrata HOM05D007374 ORTHO05D009283 4.2e-25 118.6 148 50.0
Lj1A605T43 Lonicera japonica HOM05D007374 ORTHO05D009283 4.2e-25 118.6 129 54.3
Solyc10g007730.3 Solanum lycopersicum HOM05D007374 ORTHO05D009283 4.2e-25 118.6 128 55.5
FvH4_6g38360 Fragaria vesca HOM05D007374 ORTHO05D009283 5.5e-25 118.2 160 48.1
FAN14G0493 Fragaria x ananassa HOM05D007374 ORTHO05D009283 5.5e-25 118.2 160 48.1
Migut.M00488 Erythranthe guttata HOM05D007374 ORTHO05D009283 7.1e-25 117.9 149 50.3
Gohir.A05G379500 Gossypium hirsutum HOM05D007374 ORTHO05D009283 7.1e-25 117.9 144 52.8
Gorai.012G040800 Gossypium raimondii HOM05D007374 ORTHO05D009283 9.3e-25 117.5 144 52.8
Cfa021554 Carpinus fangiana HOM05D007374 ORTHO05D009283 1.2e-24 117.1 157 49.0
Gohir.D04G035900 Gossypium hirsutum HOM05D007374 ORTHO05D009283 2.1e-24 116.3 144 52.1
Haze_13514 Corylus avellana HOM05D007374 ORTHO05D009283 2.7e-24 115.9 140 52.1
Sabra05G0154300 Salix brachista HOM05D007374 ORTHO05D009283 3.5e-24 115.5 153 49.7
Prupe.3G174200 Prunus persica HOM05D007374 ORTHO05D009283 4.6e-24 115.2 160 48.1
Oeu005608.1 Olea europaea HOM05D007374 ORTHO05D009283 1.0e-23 114.0 115 53.9
Ah.01g013460 Amaranthus hybridus HOM05D007374 ORTHO05D009283 1.3e-23 113.6 118 58.5
ClCG09G022490 Citrullus lanatus HOM05D007374 ORTHO05D009283 1.3e-23 113.6 132 52.3
MD17G1138200 Malus domestica HOM05D007374 ORTHO05D009283 1.8e-23 113.2 156 50.6
Sed0010749 Sechium edule HOM05D007374 ORTHO05D009283 1.8e-23 113.2 152 49.3
Potri.005G203100 Populus trichocarpa HOM05D007374 ORTHO05D009283 2.3e-23 112.8 150 50.7
Hund08257 Selenicereus undatus HOM05D007374 ORTHO05D009283 3.0e-23 112.5 128 51.6
Atru.chr6.2078 Acer truncatum HOM05D007374 ORTHO05D009283 3.9e-23 112.1 114 58.8
vmacro01388 Vaccinium macrocarpon HOM05D007374 ORTHO05D009283 5.1e-23 111.7 140 47.1
Thecc.01G163300 Theobroma cacao HOM05D007374 ORTHO05D009283 1.1e-22 110.5 114 55.3
BcaB02g06801 Brassica carinata HOM05D007374 ORTHO05D009283 1.9e-22 109.8 142 48.6
TPR.G12560 Trifolium pratense HOM05D007374 ORTHO05D009283 3.3e-22 109.0 158 46.2
Glyma.02G285800 Glycine max HOM05D007374 ORTHO05D009283 4.3e-22 108.6 156 44.2
A10p05160 Brassica napus HOM05D007374 ORTHO05D009283 5.7e-22 108.2 145 47.6
BraA10t42783Z Brassica rapa HOM05D007374 ORTHO05D009283 5.7e-22 108.2 145 47.6
CiPaw.03G190900 Carya illinoinensis HOM05D007374 ORTHO05D009283 5.7e-22 108.2 121 52.9
AUR62017602 Chenopodium quinoa HOM05D007374 ORTHO05D009283 5.7e-22 108.2 123 54.5
CsaV3_7G022640 Cucumis sativus L. HOM05D007374 ORTHO05D009283 9.6e-22 107.5 141 48.9
Eucgr.A01989 Eucalyptus grandis HOM05D007374 ORTHO05D009283 9.6e-22 107.5 103 55.3
PGR042G1022 Punica granatum HOM05D007374 ORTHO05D009283 1.3e-21 107.1 152 47.4
EL10Ac9g22854 Beta vulgaris HOM05D007374 ORTHO05D009283 1.6e-21 106.7 134 50.7
SGA_v2.0_scaffold70G23631 Striga asiatica HOM05D007374 ORTHO05D009283 2.1e-21 106.3 118 54.2
Medtr5g091560 Medicago truncatula HOM05D007374 ORTHO05D009283 2.8e-21 105.9 143 49.7
Psat2g016160 Pisum sativum HOM05D007374 ORTHO05D009283 2.8e-21 105.9 141 49.6
Cpa.g.sc1195.1 Carica papaya HOM05D007374 ORTHO05D009283 3.7e-21 105.5 168 43.5
MELO3C012638.2 Cucumis melo HOM05D007374 ORTHO05D009283 4.8e-21 105.1 147 46.9
Rhsim12G0085200 Rhododendron simsii HOM05D007374 ORTHO05D009283 4.8e-21 105.1 148 43.9
BolC5t29248H Brassica oleracea HOM05D007374 ORTHO05D009283 6.2e-21 104.8 140 46.4
Carub.0001s0588 Capsella rubella HOM05D007374 ORTHO05D009283 6.2e-21 104.8 139 45.3
AUR62015143 Chenopodium quinoa HOM05D007374 ORTHO05D009283 1.1e-20 104.0 148 46.6
Thhalv10009532m.g Eutrema salsugineum HOM05D007374 ORTHO05D009283 1.1e-20 104.0 125 48.8
C05p04770 Brassica napus HOM05D007374 ORTHO05D009283 1.4e-20 103.6 146 44.5
Aqoxy4G00135 Aquilegia oxysepala HOM05D007374 ORTHO05D009283 1.8e-20 103.2 140 50.7
Glyma.14G028800 Glycine max HOM05D007374 ORTHO05D009283 3.1e-20 102.4 103 54.4
arahy.Tifrunner.gnm1.ann1.PL1TQM Arachis hypogaea HOM05D007374 ORTHO05D009283 4.0e-20 102.1 124 50.0
Ciclev10032166m.g Citrus clementina HOM05D007374 ORTHO05D009283 4.0e-20 102.1 109 55.0
Cc05_g09580 Coffea canephora HOM05D007374 ORTHO05D009283 6.9e-20 101.3 142 45.8
Sp1g05270 Schrenkiella parvula HOM05D007374 ORTHO05D009283 6.9e-20 101.3 146 43.8
AT1G06510 Arabidopsis thaliana HOM05D007374 ORTHO05D009283 9.0e-20 100.9 132 49.2
Peaxi162Scf00035g00262 Petunia axillaris HOM05D007374 ORTHO05D009283 9.0e-20 100.9 176 42.0
Ca_30616_v3 Cicer arietinum L. HOM05D007374 ORTHO05D009283 1.2e-19 100.5 158 46.2
DCAR_009800 Daucus carota HOM05D007374 ORTHO05D009283 1.5e-19 100.1 133 47.4
Lalb_Chr10g0106631 Lupinus albus HOM05D007374 ORTHO05D009283 2.0e-19 99.8 131 48.9
AL1G16540 Arabidopsis lyrata HOM05D007374 ORTHO05D009283 2.6e-19 99.4 139 47.5
LjContig00049g0002262 Lotus japonicus HOM05D007374 ORTHO05D009283 2.6e-19 99.4 156 41.7
VMungo0647G1819 Vigna mungo HOM05D007374 ORTHO05D009283 2.6e-19 99.4 138 47.1
FAN05G2216 Fragaria x ananassa HOM05D007374 ORTHO05D009283 3.4e-19 99.0 171 39.2
arahy.Tifrunner.gnm1.ann1.G50Y2D Arachis hypogaea HOM05D007374 ORTHO05D009283 4.5e-19 98.6 126 50.0
FAN09G2358 Fragaria x ananassa HOM05D007374 ORTHO05D009283 5.8e-19 98.2 171 38.6
FAN02G3372 Fragaria x ananassa HOM05D007374 ORTHO05D009283 7.6e-19 97.8 171 39.2
CDE02G0809 Ceratophyllum demersum HOM05D007374 ORTHO05D009283 1.9e-17 93.2 142 45.8
HPP92_024591 Vanilla planifolia HOM05D007374 ORTHO05D009283 2.5e-17 92.8 150 42.7
Phvul.008G231728 Phaseolus vulgaris HOM05D007374 ORTHO05D009283 1.6e-16 90.1 156 39.7
BcaC04g23554 Brassica carinata HOM05D007374 ORTHO05D009283 2.1e-16 89.7 132 41.7
unitig_746.g26685 Utricularia gibba HOM05D002434 ORTHO05D002743 3.5e-16 89.0 104 49.0
Actinidia00867 Actinidia chinensis HOM05D007374 ORTHO05D009283 2.3e-15 86.3 67 68.7
Aa31LG1G7610 Aethionema arabicum HOM05D007374 ORTHO05D009283 2.3e-15 86.3 111 46.8
Hma1.2p1_0081F.1_g042230 Hydrangea macrophylla HOM05D007374 ORTHO05D009283 2.3e-15 86.3 76 61.8
QL08p044527 Quercus lobata HOM05D007374 ORTHO05D009283 1.1e-14 84.0 65 70.8
SalBow8G1446 Salvia bowleyana HOM05D007374 ORTHO05D009283 1.9e-14 83.2 69 65.2
HPP92_024519 Vanilla planifolia HOM05D007374 ORTHO05D009283 7.4e-14 81.3 150 40.7
Os01g0696000 Oryza sativa ssp. japonica HOM05D007374 ORTHO05D009283 4.8e-13 78.6 77 55.8
MD09G1150800 Malus domestica HOM05D007374 ORTHO05D009283 8.2e-13 77.8 106 48.1
LjContig00141g0020215 Lotus japonicus HOM05D007374 ORTHO05D009283 1.1e-12 77.4 169 36.1
Pp3c6_23840 Physcomitrium patens HOM05D007374 ORTHO05D009283 9.0e-12 74.3 83 49.4
Zm00001eb155870 Zea mays HOM05D007374 ORTHO05D009283 1.2e-11 73.9 143 38.5
Ca_06277_v3 Cicer arietinum L. HOM05D007374 ORTHO05D009283 4.5e-11 72.0 133 42.1
Mapoly0086s0079 Marchantia polymorpha HOM05D007374 ORTHO05D009283 3.2e-09 65.9 119 39.5
MSTRG.15040 Avicennia marina HOM05D007374 ORTHO05D009283 2.7e-08 62.8 139 35.3
CDE09G1208 Ceratophyllum demersum HOM05D007374 ORTHO05D009283 4.6e-08 62.0 106 39.6
Sc06g0007570 Simmondsia chinensis HOM05D007374 ORTHO05D009283 2.0e-06 56.6 87 41.4


User provided reference genes

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