Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr17g0565411 Helianthus annuus HOM05D003750 ORTHO05D004337 3.8e-63 244.6 118 100.0
HanXRQChr17g0565191 Helianthus annuus HOM05D003750 ORTHO05D004337 1.1e-62 243.0 118 99.2
HanXRQChr17g0565441 Helianthus annuus HOM05D003750 ORTHO05D004337 1.1e-62 243.0 118 99.2
HanXRQChr17g0565471 Helianthus annuus HOM05D003750 ORTHO05D004337 1.1e-62 243.0 118 99.2
HanXRQChr17g0565481 Helianthus annuus HOM05D003750 ORTHO05D004337 6.4e-58 227.3 111 99.1
Lsat_1_v5_gn_4_26620 Lactuca sativa HOM05D003750 ORTHO05D004337 3.3e-38 161.8 114 69.3
QL08p043924 Quercus lobata HOM05D003750 ORTHO05D004337 2.0e-35 152.5 112 67.0
Haze_13489 Corylus avellana HOM05D003750 ORTHO05D004337 7.6e-35 150.6 112 67.0
Duzib264G0293 Durio zibethinus HOM05D003750 ORTHO05D004337 7.6e-35 150.6 114 68.4
Potri.005G200900 Populus trichocarpa HOM05D003750 ORTHO05D004337 2.9e-34 148.7 115 62.6
Thecc.01G160900 Theobroma cacao HOM05D003750 ORTHO05D004337 3.8e-34 148.3 114 68.4
CiPaw.03G189300 Carya illinoinensis HOM05D003750 ORTHO05D004337 4.9e-34 147.9 114 63.2
Duzib147G0801 Durio zibethinus HOM05D003750 ORTHO05D004337 1.1e-33 146.7 114 67.5
Duzib187G0136 Durio zibethinus HOM05D003750 ORTHO05D004337 1.4e-33 146.4 112 67.0
Potri.002G060800 Populus trichocarpa HOM05D003750 ORTHO05D004337 1.9e-33 146.0 115 62.6
Cfa022914 Carpinus fangiana HOM05D003750 ORTHO05D004337 3.2e-33 145.2 112 63.4
HanXRQChr06g0171371 Helianthus annuus HOM05D003750 ORTHO05D004337 5.4e-33 144.4 114 62.3
Gohir.D04G037100 Gossypium hirsutum HOM05D003750 ORTHO05D004337 7.1e-33 144.1 114 65.8
Sabra05G0152900 Salix brachista HOM05D003750 ORTHO05D004337 7.1e-33 144.1 115 61.7
Gorai.012G041900 Gossypium raimondii HOM05D003750 ORTHO05D004337 9.2e-33 143.7 114 65.8
Sabra02G0049300 Salix brachista HOM05D003750 ORTHO05D004337 9.2e-33 143.7 115 61.7
Atru.chr6.1510 Acer truncatum HOM05D003750 ORTHO05D004337 1.2e-32 143.3 112 63.4
Gohir.A05G378400 Gossypium hirsutum HOM05D003750 ORTHO05D004337 2.1e-32 142.5 114 64.9
COL.COLO4_33737 Corchorus olitorius HOM05D003750 ORTHO05D004337 2.7e-32 142.1 114 62.3
Lsat_1_v5_gn_3_35901 Lactuca sativa HOM05D003750 ORTHO05D004337 2.7e-32 142.1 112 61.6
Peaxi162Scf00807g00024 Petunia axillaris HOM05D003750 ORTHO05D004337 3.5e-32 141.7 115 60.9
Glyma.02G287400 Glycine max HOM05D003750 ORTHO05D004337 4.6e-32 141.4 114 60.5
ClCG09G022350 Citrullus lanatus HOM05D003750 ORTHO05D004337 7.8e-32 140.6 114 59.6
Dinv12695 Davidia involucrata HOM05D003750 ORTHO05D004337 7.8e-32 140.6 114 63.2
Cc05_g09310 Coffea canephora HOM05D003750 ORTHO05D004337 1.0e-31 140.2 111 64.0
CsaV3_6G038000 Cucumis sativus L. HOM05D003750 ORTHO05D004337 1.7e-31 139.4 114 58.8
ECA246G0286 Erigeron canadensis HOM05D003750 ORTHO05D004337 2.3e-31 139.0 111 60.4
Eucgr.K01198 Eucalyptus grandis HOM05D003750 ORTHO05D004337 2.3e-31 139.0 112 62.5
TAR626G1101 Trochodendron aralioides HOM05D003750 ORTHO05D004337 3.0e-31 138.7 114 60.5
vmacro12451 Vaccinium macrocarpon HOM05D003750 ORTHO05D004337 3.0e-31 138.7 110 63.6
VMungo0540G2251 Vigna mungo HOM05D003750 ORTHO05D004337 3.9e-31 138.3 112 59.8
Actinidia11198 Actinidia chinensis HOM05D003750 ORTHO05D004337 6.6e-31 137.5 113 58.4
Glyma.14G027551 Glycine max HOM05D003750 ORTHO05D004337 6.6e-31 137.5 111 57.7
Lj6g0002200 Lotus japonicus HOM05D003750 ORTHO05D004337 6.6e-31 137.5 112 58.9
Rhsim06G0118400 Rhododendron simsii HOM05D003750 ORTHO05D004337 6.6e-31 137.5 113 60.2
Phvul.008G190900 Phaseolus vulgaris HOM05D003750 ORTHO05D004337 8.6e-31 137.1 114 57.0
Phvul.006G033900 Phaseolus vulgaris HOM05D003750 ORTHO05D004337 1.1e-30 136.7 112 58.0
TWI14G1010 Tripterygium wilfordii HOM05D003750 ORTHO05D004337 1.1e-30 136.7 111 60.4
VMungo0647G1422 Vigna mungo HOM05D003750 ORTHO05D004337 1.1e-30 136.7 112 57.1
CSS0030446 Camellia sinensis var. sinensis HOM05D003750 ORTHO05D004337 1.5e-30 136.3 115 59.1
Ciclev10032169m.g Citrus clementina HOM05D003750 ORTHO05D004337 1.5e-30 136.3 114 62.3
LjContig00310g0001182 Lotus japonicus HOM05D003750 ORTHO05D004337 1.5e-30 136.3 114 57.0
Manes.01G128300 Manihot esculenta HOM05D003750 ORTHO05D004337 2.5e-30 135.6 113 60.2
ECA234G0795 Erigeron canadensis HOM05D001021 ORTHO05D000894 3.3e-30 135.2 101 67.3
Peaxi162Scf00688g00432 Petunia axillaris HOM05D003750 ORTHO05D004337 3.3e-30 135.2 115 56.5
TAR624G1252 Trochodendron aralioides HOM05D002606 ORTHO05D003016 3.3e-30 135.2 114 60.5
arahy.Tifrunner.gnm1.ann1.Y7JGW6 Arachis hypogaea HOM05D003750 ORTHO05D004337 4.3e-30 134.8 114 57.0
Sopen10g003700 Solanum pennellii HOM05D003750 ORTHO05D004337 7.3e-30 134.0 115 58.3
SGA_v2.0_scaffold70G23672 Striga asiatica HOM05D003750 ORTHO05D004337 7.3e-30 134.0 115 54.8
TWI59G1023 Tripterygium wilfordii HOM05D003750 ORTHO05D004337 7.3e-30 134.0 114 58.8
arahy.Tifrunner.gnm1.ann1.UWZ29M Arachis hypogaea HOM05D003750 ORTHO05D004337 9.6e-30 133.7 114 56.1
CAN.G585.54 Capsicum annuum HOM05D003750 ORTHO05D004337 9.6e-30 133.7 115 59.1
Cpa.g.sc50.77 Carica papaya HOM05D003750 ORTHO05D004337 9.6e-30 133.7 114 58.8
Medtr3g089570 Medicago truncatula HOM05D003750 ORTHO05D004337 9.6e-30 133.7 112 55.4
Nitab4.5_0000446g0080 Nicotiana tabacum HOM05D003750 ORTHO05D004337 9.6e-30 133.7 115 58.3
Psat0s4925g0080 Pisum sativum HOM05D003750 ORTHO05D004337 9.6e-30 133.7 112 56.2
TPR.G12519 Trifolium pratense HOM05D003750 ORTHO05D004337 9.6e-30 133.7 114 56.1
MSTRG.6755 Avicennia marina HOM05D003750 ORTHO05D004337 1.2e-29 133.3 115 60.0
Nitab4.5_0001675g0060 Nicotiana tabacum HOM05D003750 ORTHO05D004337 1.2e-29 133.3 115 59.1
Solyc10g007800.3 Solanum lycopersicum HOM05D003750 ORTHO05D004337 1.2e-29 133.3 115 58.3
FvH4_6g38100 Fragaria vesca HOM05D003750 ORTHO05D004337 1.6e-29 132.9 116 59.5
Lalb_Chr04g0248731 Lupinus albus HOM05D003750 ORTHO05D004337 1.6e-29 132.9 111 56.8
THA.LOC104803179 Tarenaya hassleriana HOM05D003750 ORTHO05D004337 1.6e-29 132.9 112 60.7
FAN05G3098 Fragaria x ananassa HOM05D003750 ORTHO05D004337 2.1e-29 132.5 116 59.5
PGSC0003DMG400017342 Solanum tuberosum HOM05D003750 ORTHO05D004337 4.7e-29 131.3 115 58.3
PGSC0003DMG400021281 Solanum tuberosum HOM05D003750 ORTHO05D004337 4.7e-29 131.3 113 58.4
Glyma.08G309700 Glycine max HOM05D003750 ORTHO05D004337 6.2e-29 131.0 114 57.0
Glyma.18G106400 Glycine max HOM05D003750 ORTHO05D004337 6.2e-29 131.0 114 57.0
Lalb_Chr20g0108881 Lupinus albus HOM05D003750 ORTHO05D004337 6.2e-29 131.0 114 57.9
MD09G1154000 Malus domestica HOM05D003750 ORTHO05D004337 6.2e-29 131.0 116 58.6
MD17G1140600 Malus domestica HOM05D003750 ORTHO05D004337 6.2e-29 131.0 116 58.6
Carub.0004s2528 Capsella rubella HOM05D003750 ORTHO05D004337 8.1e-29 130.6 115 59.1
Ca_27365_v3 Cicer arietinum L. HOM05D003750 ORTHO05D004337 8.1e-29 130.6 114 53.5
Thhalv10016927m.g Eutrema salsugineum HOM05D003750 ORTHO05D004337 8.1e-29 130.6 117 59.0
FAN14G5523 Fragaria x ananassa HOM05D003750 ORTHO05D004337 8.1e-29 130.6 113 59.3
Lalb_Chr17g0348311 Lupinus albus HOM05D003750 ORTHO05D004337 8.1e-29 130.6 114 55.3
Nitab4.5_0006934g0020 Nicotiana tabacum HOM05D003750 ORTHO05D004337 8.1e-29 130.6 115 56.5
Nitab4.5_0013539g0020 Nicotiana tabacum HOM05D003750 ORTHO05D004337 8.1e-29 130.6 115 57.4
Psat2g014640 Pisum sativum HOM05D003750 ORTHO05D004337 8.1e-29 130.6 114 54.4
AT2G42840 Arabidopsis thaliana HOM05D003750 ORTHO05D004337 1.1e-28 130.2 117 59.8
Oeu040027.1 Olea europaea HOM05D003750 ORTHO05D004337 1.4e-28 129.8 114 57.9
TPR.G16759 Trifolium pratense HOM05D003750 ORTHO05D004337 1.4e-28 129.8 113 54.9
Prupe.3G171000 Prunus persica HOM05D003750 ORTHO05D004337 1.8e-28 129.4 116 58.6
AL4G41450 Arabidopsis lyrata HOM05D003750 ORTHO05D004337 2.4e-28 129.0 117 59.8
Aa31LG1G24600 Aethionema arabicum HOM05D003750 ORTHO05D004337 3.1e-28 128.6 115 60.0
CAN.G164.22 Capsicum annuum HOM05D003750 ORTHO05D004337 3.1e-28 128.6 109 59.6
PGSC0003DMG400007796 Solanum tuberosum HOM05D003750 ORTHO05D004337 3.1e-28 128.6 109 58.7
FAN02G2641 Fragaria x ananassa HOM05D003750 ORTHO05D004337 5.2e-28 127.9 116 57.8
Nitab4.5_0002027g0180 Nicotiana tabacum HOM05D003750 ORTHO05D004337 5.2e-28 127.9 115 55.7
Oeu020066.1 Olea europaea HOM05D003750 ORTHO05D004337 5.2e-28 127.9 115 58.3
Lalb_Chr10g0106741 Lupinus albus HOM05D003750 ORTHO05D004337 6.9e-28 127.5 114 55.3
Solyc12g011010.2 Solanum lycopersicum HOM05D003750 ORTHO05D004337 6.9e-28 127.5 109 59.6
BcaC02g07218 Brassica carinata HOM05D003750 ORTHO05D004337 8.9e-28 127.1 115 58.3
A04p32410 Brassica napus HOM05D003750 ORTHO05D004337 8.9e-28 127.1 115 58.3
C04p69930 Brassica napus HOM05D003750 ORTHO05D004337 8.9e-28 127.1 115 58.3
BolC4t28493H Brassica oleracea HOM05D003750 ORTHO05D004337 8.9e-28 127.1 115 58.3
BraA04t18694Z Brassica rapa HOM05D003750 ORTHO05D004337 8.9e-28 127.1 115 58.3
CAN.G1191.4 Capsicum annuum HOM05D003750 ORTHO05D004337 8.9e-28 127.1 115 55.7
MSTRG.15053 Avicennia marina HOM05D003750 ORTHO05D004337 1.2e-27 126.7 120 55.0
Nitab4.5_0001402g0030 Nicotiana tabacum HOM05D003750 ORTHO05D004337 1.2e-27 126.7 115 55.7
Solyc07g055950.3 Solanum lycopersicum HOM05D003750 ORTHO05D004337 1.2e-27 126.7 115 56.5
BcaNung06740 Brassica carinata HOM05D003750 ORTHO05D004337 2.0e-27 125.9 117 56.4
A05p03190 Brassica napus HOM05D003750 ORTHO05D004337 2.0e-27 125.9 117 56.4
C04p03840 Brassica napus HOM05D003750 ORTHO05D004337 2.0e-27 125.9 117 56.4
BolC4t22020H Brassica oleracea HOM05D003750 ORTHO05D004337 2.0e-27 125.9 117 56.4
BraA05t19309Z Brassica rapa HOM05D003750 ORTHO05D004337 2.0e-27 125.9 117 56.4
ClCG02G018380 Citrullus lanatus HOM05D003750 ORTHO05D004337 2.0e-27 125.9 115 53.9
MELO3C014462.2 Cucumis melo HOM05D003750 ORTHO05D004337 2.0e-27 125.9 110 56.4
Sp4g24960 Schrenkiella parvula HOM05D003750 ORTHO05D004337 2.0e-27 125.9 115 57.4
RcHm_v2.0_Chr2g0151161 Rosa chinensis HOM05D003750 ORTHO05D004337 2.6e-27 125.6 116 57.8
Sopen07g029310 Solanum pennellii HOM05D003750 ORTHO05D004337 2.6e-27 125.6 112 56.2
Sopen12g006370 Solanum pennellii HOM05D003750 ORTHO05D004337 2.6e-27 125.6 110 60.0
arahy.Tifrunner.gnm1.ann1.N94NTJ Arachis hypogaea HOM05D003750 ORTHO05D004337 3.4e-27 125.2 109 56.0
PGR142G2515 Punica granatum HOM05D003750 ORTHO05D004337 3.4e-27 125.2 114 56.1
BcaB06g29267 Brassica carinata HOM05D003750 ORTHO05D004337 4.4e-27 124.8 115 57.4
Sed0024619 Sechium edule HOM05D003750 ORTHO05D004337 5.8e-27 124.4 114 51.8
Nn6g34390 Nelumbo nucifera HOM05D003750 ORTHO05D004337 7.6e-27 124.0 114 55.3
arahy.Tifrunner.gnm1.ann1.ZP8MLZ Arachis hypogaea HOM05D003750 ORTHO05D004337 1.3e-26 123.2 108 56.5
CANSAT64G2056 Cannabis sativa HOM05D003750 ORTHO05D004337 1.3e-26 123.2 107 55.1
CARHR137920 Cardamine hirsuta HOM05D003750 ORTHO05D004337 1.3e-26 123.2 117 57.3
HanXRQChr01g0028591 Helianthus annuus HOM05D003750 ORTHO05D004337 1.3e-26 123.2 112 58.9
Aqoxy4G00176 Aquilegia oxysepala HOM05D003750 ORTHO05D004337 3.8e-26 121.7 119 54.6
MELO3C019689.2 Cucumis melo HOM05D003750 ORTHO05D004337 3.8e-26 121.7 115 52.2
CsaV3_6G015810 Cucumis sativus L. HOM05D003750 ORTHO05D004337 3.8e-26 121.7 115 52.2
unitig_37.g12854 Utricularia gibba HOM05D003750 ORTHO05D004337 6.4e-26 120.9 105 57.1
Lalb_Chr19g0137861 Lupinus albus HOM05D003750 ORTHO05D004337 8.4e-26 120.6 111 55.0
Peaxi162Scf00035g00302 Petunia axillaris HOM05D003750 ORTHO05D004337 1.1e-25 120.2 112 55.4
SalBow7G0202 Salvia bowleyana HOM05D003750 ORTHO05D004337 2.4e-25 119.0 127 52.0
unitig_46.g18277 Utricularia gibba HOM05D003750 ORTHO05D004337 3.2e-25 118.6 106 53.8
Sed0013297 Sechium edule HOM05D003750 ORTHO05D004337 5.4e-25 117.9 111 51.4
DCAR_009794 Daucus carota HOM05D003750 ORTHO05D004337 9.3e-25 117.1 117 51.3
Ca_06287_v3 Cicer arietinum L. HOM05D003750 ORTHO05D004337 1.2e-24 116.7 97 59.8
Migut.M00516 Erythranthe guttata HOM05D003750 ORTHO05D004337 1.2e-24 116.7 111 55.0
Nn3g20965 Nelumbo nucifera HOM05D003750 ORTHO05D004337 1.6e-24 116.3 115 53.0
Sed0014259 Sechium edule HOM05D003750 ORTHO05D004337 1.6e-24 116.3 109 54.1
unitig_747.g21612 Utricularia gibba HOM05D003750 ORTHO05D004337 3.5e-24 115.2 107 52.3
unitig_899.g15337 Utricularia gibba HOM05D003750 ORTHO05D004337 4.6e-24 114.8 109 51.4
AUR62015148 Chenopodium quinoa HOM05D003750 ORTHO05D004337 7.8e-24 114.0 109 51.4
MBI07_g30204_MAGBIO Magnolia biondii HOM05D003750 ORTHO05D004337 7.8e-24 114.0 109 55.0
DCAR_021309 Daucus carota HOM05D003750 ORTHO05D004337 1.0e-23 113.6 115 53.0
MBI06_g20684_MAGBIO Magnolia biondii HOM05D003750 ORTHO05D004337 1.3e-23 113.2 111 53.2
unitig_62.g23108 Utricularia gibba HOM05D003750 ORTHO05D004337 3.0e-23 112.1 111 50.5
SalBow7G1469 Salvia bowleyana HOM05D003750 ORTHO05D004337 6.6e-23 110.9 107 52.3
ATR0737G120 Amborella trichopoda HOM05D003750 ORTHO05D004337 1.1e-22 110.2 114 50.9
EL10Ac9g22858 Beta vulgaris HOM05D003750 ORTHO05D004337 1.1e-22 110.2 108 50.0
DCAR_016898 Daucus carota HOM05D003750 ORTHO05D004337 1.5e-22 109.8 108 54.6
CDE09G1130 Ceratophyllum demersum HOM05D003750 ORTHO05D004337 2.5e-22 109.0 112 51.8
unitig_85.g27387 Utricularia gibba HOM05D003750 ORTHO05D004337 2.5e-22 109.0 103 52.4
Ah.01g001950 Amaranthus hybridus HOM05D003750 ORTHO05D004337 3.3e-22 108.6 106 51.9
Migut.H02092 Erythranthe guttata HOM05D003750 ORTHO05D004337 3.3e-22 108.6 109 50.5
Ah.01g013400 Amaranthus hybridus HOM05D003750 ORTHO05D004337 5.6e-22 107.8 104 51.9
Hund08216 Selenicereus undatus HOM05D003750 ORTHO05D004337 9.6e-22 107.1 109 49.5
Sc15g0002430 Simmondsia chinensis HOM05D003750 ORTHO05D004337 1.6e-21 106.3 109 48.6
CDE02G2915 Ceratophyllum demersum HOM05D003750 ORTHO05D004337 3.6e-21 105.1 114 50.0
Os01g0726700 Oryza sativa ssp. japonica HOM05D003750 ORTHO05D004337 4.8e-21 104.8 109 53.2
Glyma.02G280550 Glycine max HOM05D003750 ORTHO05D004337 6.2e-21 104.4 112 50.0
Eucgr.A01963 Eucalyptus grandis HOM05D003750 ORTHO05D004337 1.8e-20 102.8 112 50.0
PSO675G0845 Papaver somniferum HOM05D003750 ORTHO05D004337 1.8e-20 102.8 119 49.6
PSO541G0678 Papaver somniferum HOM05D003750 ORTHO05D004337 3.1e-20 102.1 119 49.6
Zm00001eb154370 Zea mays HOM05D003750 ORTHO05D004337 3.1e-20 102.1 109 53.2
HPP92_009096 Vanilla planifolia HOM05D003750 ORTHO05D004337 5.8e-19 97.8 109 49.5
SEGI_25228 Sequoiadendron giganteum HOM05D003750 ORTHO05D004337 1.1e-17 93.6 110 49.1
AUR62017604 Chenopodium quinoa HOM05D003750 ORTHO05D004337 2.1e-16 89.4 90 45.6
Zm00001eb239390 Zea mays HOM05D003750 ORTHO05D004337 4.3e-14 81.6 110 40.9
Os02g0230300 Oryza sativa ssp. japonica HOM05D003750 ORTHO05D004337 3.4e-11 72.0 67 53.7
Pp3c4_16960 Physcomitrium patens HOM05D003750 ORTHO05D004337 4.5e-11 71.6 115 40.0
Zm00001eb120700 Zea mays HOM05D003750 ORTHO05D004337 2.2e-10 69.3 115 39.1
Zm00001eb278420 Zea mays HOM05D003750 ORTHO05D004337 3.8e-10 68.6 122 36.9
Zm00001eb384740 Zea mays HOM05D003750 ORTHO05D004337 8.4e-10 67.4 109 39.4
Pp3c11_23110 Physcomitrium patens HOM05D003750 ORTHO05D004337 9.3e-09 63.9 114 36.0
SEGI_36288 Sequoiadendron giganteum HOM05D007363 ORTHO05D009018 9.3e-09 63.9 107 37.4
Zm00001eb277660 Zea mays HOM05D003750 ORTHO05D004337 2.1e-08 62.8 108 38.0
SMO367G0707 Selaginella moellendorffii HOM05D007363 ORTHO05D009018 2.7e-08 62.4 108 39.8
SEGI_24140 Sequoiadendron giganteum HOM05D007363 ORTHO05D009018 6.0e-08 61.2 110 34.5
Mapoly0090s0021 Marchantia polymorpha HOM05D021038 ORTHO05D009018 1.8e-07 59.7 102 37.3
AagrBONN_evm.TU.Sc2ySwM_228.4867 Anthoceros agrestis HOM05D003750 ORTHO05D004337 1.1e-06 57.0 107 33.6
Potri.002G038200 Populus trichocarpa HOM05D007363 ORTHO05D009018 4.3e-06 55.1 111 31.5
Migut.N02204 Erythranthe guttata HOM05D007363 ORTHO05D009018 9.6e-06 53.9 100 31.0


User provided reference genes

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