Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr17g0565391 Helianthus annuus HOM05D005957 ORTHO05D007318 4.4e-106 387.9 184 100.0
HanXRQChr01g0028631 Helianthus annuus HOM05D005957 ORTHO05D007318 1.0e-70 270.4 187 71.1
Lsat_1_v5_gn_0_40840 Lactuca sativa HOM05D005957 ORTHO05D007318 3.9e-46 188.7 123 72.4
ECA236G1285 Erigeron canadensis HOM05D005957 ORTHO05D007318 4.3e-45 185.3 117 76.1
Peaxi162Scf00390g00049 Petunia axillaris HOM05D005957 ORTHO05D007318 4.9e-41 171.8 175 54.9
Hma1.2p1_0119F.1_g056870 Hydrangea macrophylla HOM05D005957 ORTHO05D007318 1.9e-40 169.9 176 52.8
Nitab4.5_0007927g0010 Nicotiana tabacum HOM05D005957 ORTHO05D007318 6.0e-39 164.9 176 54.0
Nitab4.5_0000002g0080 Nicotiana tabacum HOM05D005957 ORTHO05D007318 1.3e-38 163.7 174 52.3
Haze_24453 Corylus avellana HOM05D005957 ORTHO05D007318 3.0e-38 162.5 167 50.9
GSVIVG01024580001 Vitis vinifera HOM05D005957 ORTHO05D007318 3.9e-38 162.2 174 48.3
QL01p025125 Quercus lobata HOM05D005957 ORTHO05D007318 6.7e-38 161.4 170 52.9
Solyc06g082450.1 Solanum lycopersicum HOM05D005957 ORTHO05D007318 1.5e-37 160.2 182 50.0
Peaxi162Scf01692g00003 Petunia axillaris HOM05D005957 ORTHO05D007318 1.9e-37 159.8 173 50.9
FvH4_3g40300 Fragaria vesca HOM05D005957 ORTHO05D007318 2.5e-37 159.5 168 52.4
Nitab4.5_0002091g0020 Nicotiana tabacum HOM05D005957 ORTHO05D007318 2.5e-37 159.5 173 50.9
FAN11G2330 Fragaria x ananassa HOM05D005957 ORTHO05D007318 3.3e-37 159.1 158 54.4
FAN21G1009 Fragaria x ananassa HOM05D005957 ORTHO05D007318 3.3e-37 159.1 168 53.0
Cfa011817 Carpinus fangiana HOM05D005957 ORTHO05D007318 7.4e-37 157.9 168 53.0
Oeu064677.1 Olea europaea HOM05D005957 ORTHO05D007318 7.4e-37 157.9 165 52.1
CANSAT54G0691 Cannabis sativa HOM05D005957 ORTHO05D007318 9.6e-37 157.5 187 48.1
FAN16G3236 Fragaria x ananassa HOM05D005957 ORTHO05D007318 9.6e-37 157.5 158 53.2
Potri.013G155300 Populus trichocarpa HOM05D005957 ORTHO05D007318 2.8e-36 156.0 171 50.9
PGSC0003DMG400046061 Solanum tuberosum HOM05D005957 ORTHO05D007318 2.8e-36 156.0 169 53.8
RcHm_v2.0_Chr5g0072641 Rosa chinensis HOM05D005957 ORTHO05D007318 8.2e-36 154.5 164 51.2
CiPaw.13G065100 Carya illinoinensis HOM05D005957 ORTHO05D007318 1.1e-35 154.1 164 50.0
FAN25G1085 Fragaria x ananassa HOM05D005957 ORTHO05D007318 1.1e-35 154.1 157 54.8
Manes.18G139500 Manihot esculenta HOM05D005957 ORTHO05D007318 1.1e-35 154.1 173 49.1
Solyc01g090870.1 Solanum lycopersicum HOM05D005957 ORTHO05D007318 1.4e-35 153.7 170 54.1
Sopen01g036610 Solanum pennellii HOM05D005957 ORTHO05D007318 1.4e-35 153.7 169 54.4
Potri.019G128400 Populus trichocarpa HOM05D005957 ORTHO05D007318 1.8e-35 153.3 167 49.7
Cc01_g15210 Coffea canephora HOM05D005957 ORTHO05D007318 2.4e-35 152.9 167 49.7
COL.COLO4_11196 Corchorus olitorius HOM05D005957 ORTHO05D007318 2.4e-35 152.9 180 47.8
CSS0038993 Camellia sinensis var. sinensis HOM05D005957 ORTHO05D007318 6.9e-35 151.4 111 67.6
Duzib168G0649 Durio zibethinus HOM05D005957 ORTHO05D007318 6.9e-35 151.4 174 48.3
SGA_v2.0_scaffold77G25368 Striga asiatica HOM05D005957 ORTHO05D007318 6.9e-35 151.4 177 46.9
Prupe.6G042800 Prunus persica HOM05D005957 ORTHO05D007318 9.0e-35 151.0 166 49.4
Sabra19G0126000 Salix brachista HOM05D005957 ORTHO05D007318 2.0e-34 149.8 167 47.9
Atru.chr1.2524 Acer truncatum HOM05D005957 ORTHO05D007318 2.9e-33 146.0 175 48.6
CAN.G1872.4 Capsicum annuum HOM05D005957 ORTHO05D007318 3.8e-33 145.6 124 56.5
MD03G1053700 Malus domestica HOM05D005957 ORTHO05D007318 1.4e-32 143.7 171 50.9
TWI79G1455 Tripterygium wilfordii HOM05D005957 ORTHO05D007318 1.4e-32 143.7 114 59.6
Dinv04837 Davidia involucrata HOM05D005957 ORTHO05D007318 9.3e-32 141.0 112 58.9
Nitab4.5_0002759g0020 Nicotiana tabacum HOM05D005957 ORTHO05D007318 9.3e-32 141.0 165 50.3
MD11G1055300 Malus domestica HOM05D005957 ORTHO05D007318 2.1e-31 139.8 171 46.2
Lalb_Chr17g0345591 Lupinus albus HOM05D005957 ORTHO05D007318 2.7e-31 139.4 161 48.4
Migut.N00743 Erythranthe guttata HOM05D005957 ORTHO05D007318 3.5e-31 139.0 192 43.2
Aqoxy2G00718 Aquilegia oxysepala HOM05D005957 ORTHO05D007318 4.6e-31 138.7 167 44.3
MBI03_g02190_MAGBIO Magnolia biondii HOM05D005957 ORTHO05D007318 4.6e-31 138.7 178 43.8
Psat2g052120 Pisum sativum HOM05D005957 ORTHO05D007318 6.1e-31 138.3 178 43.3
Migut.D00827 Erythranthe guttata HOM05D005957 ORTHO05D007318 7.9e-31 137.9 174 46.6
CiPaw.14G051700 Carya illinoinensis HOM05D005957 ORTHO05D007318 1.3e-30 137.1 171 43.3
Gohir.A05G129400 Gossypium hirsutum HOM05D005957 ORTHO05D007318 1.8e-30 136.7 169 46.7
SalBow6G3501 Salvia bowleyana HOM05D005957 ORTHO05D007318 3.0e-30 136.0 105 61.0
Gorai.009G137600 Gossypium raimondii HOM05D005957 ORTHO05D007318 5.1e-30 135.2 169 45.6
Sopen06g033830 Solanum pennellii HOM05D005957 ORTHO05D007318 1.5e-29 133.7 111 58.6
Sabra13G0125100 Salix brachista HOM05D005957 ORTHO05D007318 1.9e-29 133.3 110 59.1
Thecc.09G362300 Theobroma cacao HOM05D005957 ORTHO05D007318 3.3e-29 132.5 110 58.2
Medtr5g075190 Medicago truncatula HOM05D005957 ORTHO05D007318 5.7e-29 131.7 172 45.3
Glyma.14G203500 Glycine max HOM05D005957 ORTHO05D007318 7.4e-29 131.3 174 45.4
Rhsim13G0060900 Rhododendron simsii HOM05D005957 ORTHO05D007318 1.3e-28 130.6 107 62.6
Cpa.g.sc2.317 Carica papaya HOM05D005957 ORTHO05D007318 1.6e-28 130.2 110 58.2
MSTRG.17909 Avicennia marina HOM05D005957 ORTHO05D007318 2.2e-28 129.8 112 53.6
Ah.08g217120 Amaranthus hybridus HOM05D005957 ORTHO05D007318 4.8e-28 128.6 147 44.2
TPR.G25771 Trifolium pratense HOM05D005957 ORTHO05D007318 6.3e-28 128.3 174 44.8
vmacro02888 Vaccinium macrocarpon HOM05D005957 ORTHO05D007318 8.2e-28 127.9 109 57.8
LjContig00141g0008224 Lotus japonicus HOM05D005957 ORTHO05D007318 1.1e-27 127.5 163 44.8
Ciclev10003853m.g Citrus clementina HOM05D005957 ORTHO05D007318 1.4e-27 127.1 181 42.5
VMungo0647G0754 Vigna mungo HOM05D005957 ORTHO05D007318 1.8e-27 126.7 170 45.3
Glyma.02G235500 Glycine max HOM05D005957 ORTHO05D007318 2.4e-27 126.3 173 45.7
Ca_05700_v3 Cicer arietinum L. HOM05D005957 ORTHO05D007318 4.1e-27 125.6 126 47.6
Ca_30026_v3 Cicer arietinum L. HOM05D005957 ORTHO05D007318 4.1e-27 125.6 126 47.6
TAR623G0423 Trochodendron aralioides HOM05D005957 ORTHO05D007318 9.0e-27 124.4 109 55.0
EL10Ac7g16454 Beta vulgaris HOM05D005957 ORTHO05D007318 2.0e-26 123.2 155 38.7
CsaV3_6G019090 Cucumis sativus L. HOM05D005957 ORTHO05D007318 2.6e-26 122.9 180 43.9
Sed0019639 Sechium edule HOM05D005957 ORTHO05D007318 2.6e-26 122.9 178 39.9
Gohir.D05G134050 Gossypium hirsutum HOM05D005957 ORTHO05D007318 7.7e-26 121.3 120 51.7
Phvul.008G248400 Phaseolus vulgaris HOM05D005957 ORTHO05D007318 1.7e-25 120.2 169 44.4
Oeu011373.1 Olea europaea HOM05D005957 ORTHO05D007318 2.9e-25 119.4 109 55.0
Nn5g26879 Nelumbo nucifera HOM05D005957 ORTHO05D007318 3.8e-25 119.0 117 53.0
Dinv28722 Davidia involucrata HOM05D005957 ORTHO05D007318 1.1e-24 117.5 91 62.6
Phvul.006G076900 Phaseolus vulgaris HOM05D005957 ORTHO05D007318 7.2e-24 114.8 131 46.6
THA.LOC104800785 Tarenaya hassleriana HOM05D005957 ORTHO05D007318 7.2e-24 114.8 182 37.4
MELO3C026874.2 Cucumis melo HOM05D005957 ORTHO05D007318 9.4e-24 114.4 179 39.7
ATR0681G143 Amborella trichopoda HOM05D005957 ORTHO05D007318 2.1e-23 113.2 121 48.8
Sc21g0004870 Simmondsia chinensis HOM05D005957 ORTHO05D007318 7.9e-23 111.3 105 50.5
AT2G30395 Arabidopsis thaliana HOM05D005957 ORTHO05D007318 1.8e-22 110.2 195 36.9
PSO170G5428 Papaver somniferum HOM05D005957 ORTHO05D007318 3.0e-22 109.4 115 50.4
PSO017G7297 Papaver somniferum HOM05D005957 ORTHO05D007318 6.7e-22 108.2 115 50.4
ClCG02G019100 Citrullus lanatus HOM05D005957 ORTHO05D007318 8.8e-22 107.8 176 38.6
DCAR_023195 Daucus carota HOM05D005957 ORTHO05D007318 1.1e-21 107.5 170 37.1
AL4G25260 Arabidopsis lyrata HOM05D005957 ORTHO05D007318 2.5e-21 106.3 197 36.5
BcaB06g28364 Brassica carinata HOM05D005957 ORTHO05D007318 2.5e-21 106.3 197 38.1
Carub.0004s1155 Capsella rubella HOM05D005957 ORTHO05D007318 2.5e-21 106.3 198 35.9
Aa31LG5G6330 Aethionema arabicum HOM05D005957 ORTHO05D007318 5.7e-21 105.1 206 34.5
Dinv12270 Davidia involucrata HOM05D005957 ORTHO05D007318 6.3e-20 101.7 88 55.7
BcaC02g11133 Brassica carinata HOM05D005957 ORTHO05D007318 1.4e-19 100.5 109 45.0
Sp4g12950 Schrenkiella parvula HOM05D005957 ORTHO05D007318 1.4e-19 100.5 109 44.0
Ah.15g095100 Amaranthus hybridus HOM05D005957 ORTHO05D007318 1.8e-19 100.1 115 45.2
CARHR123750 Cardamine hirsuta HOM05D005957 ORTHO05D007318 1.8e-19 100.1 208 36.1
A05p15090 Brassica napus HOM05D005957 ORTHO05D007318 2.4e-19 99.8 109 45.0
BolC4t23551H Brassica oleracea HOM05D005957 ORTHO05D007318 3.1e-19 99.4 109 44.0
C04p20120 Brassica napus HOM05D005957 ORTHO05D007318 4.1e-19 99.0 109 44.0
PGR119G2032 Punica granatum HOM05D005957 ORTHO05D007318 5.3e-19 98.6 69 60.9
Eucgr.J01842 Eucalyptus grandis HOM05D005957 ORTHO05D007318 9.1e-19 97.8 99 49.5
Thhalv10017867m.g Eutrema salsugineum HOM05D005957 ORTHO05D007318 1.5e-18 97.1 204 32.8
A04p23170 Brassica napus HOM05D005957 ORTHO05D007318 2.6e-18 96.3 198 36.4
Os07g0679100 Oryza sativa ssp. japonica HOM05D005957 ORTHO05D007318 7.7e-18 94.7 198 33.3
BcaB02g10322 Brassica carinata HOM05D005957 ORTHO05D007318 1.0e-17 94.4 159 36.5
AUR62007156 Chenopodium quinoa HOM05D003140 ORTHO05D003851 1.3e-17 94.0 127 40.9
BraA05t20430Z Brassica rapa HOM05D005957 ORTHO05D007318 2.2e-17 93.2 109 43.1
BcaC02g08022 Brassica carinata HOM05D005957 ORTHO05D007318 5.0e-17 92.0 198 35.9
C04p59320 Brassica napus HOM05D005957 ORTHO05D007318 5.0e-17 92.0 198 35.9
Thhalv10017852m.g Eutrema salsugineum HOM05D005957 ORTHO05D007318 6.5e-17 91.7 204 32.8
Sp1g05630 Schrenkiella parvula HOM05D005957 ORTHO05D007318 6.5e-17 91.7 67 55.2
AT1G06923 Arabidopsis thaliana HOM05D005957 ORTHO05D007318 8.5e-17 91.3 68 54.4
BcaC07g42550 Brassica carinata HOM05D005957 ORTHO05D007318 8.5e-17 91.3 71 50.7
BraA04t17844Z Brassica rapa HOM05D005957 ORTHO05D007318 8.5e-17 91.3 153 37.9
Os05g0328300 Oryza sativa ssp. japonica HOM05D005957 ORTHO05D007318 1.1e-16 90.9 70 57.1
Thhalv10009633m.g Eutrema salsugineum HOM05D005957 ORTHO05D007318 1.9e-16 90.1 70 52.9
AL1G16950 Arabidopsis lyrata HOM05D005957 ORTHO05D007318 2.5e-16 89.7 67 53.7
Carub.0001s0622 Capsella rubella HOM05D005957 ORTHO05D007318 3.2e-16 89.4 67 53.7
BolC4t27440H Brassica oleracea HOM05D005957 ORTHO05D007318 7.2e-16 88.2 86 47.7
Zm00001eb350230 Zea mays HOM05D005957 ORTHO05D007318 9.4e-16 87.8 98 45.9
CARHR006600 Cardamine hirsuta HOM05D005957 ORTHO05D007318 4.7e-15 85.5 77 44.2
BcaC07g42036 Brassica carinata HOM05D005957 ORTHO05D007318 2.3e-14 83.2 71 47.9
BcaC07g42037 Brassica carinata HOM05D005957 ORTHO05D007318 2.3e-14 83.2 71 47.9
C08p50900 Brassica napus HOM05D005957 ORTHO05D007318 2.3e-14 83.2 71 47.9
BolC8t52618H Brassica oleracea HOM05D005957 ORTHO05D007318 2.3e-14 83.2 71 47.9
A09p66670 Brassica napus HOM05D005957 ORTHO05D007318 3.9e-14 82.4 69 47.8
BraA09t42007Z Brassica rapa HOM05D005957 ORTHO05D007318 3.9e-14 82.4 69 47.8
Zm00001eb330630 Zea mays HOM05D005957 ORTHO05D007318 3.7e-12 75.9 68 50.0
SEGI_34718 Sequoiadendron giganteum HOM05D005957 ORTHO05D007318 1.6e-07 60.5 59 40.7


User provided reference genes

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