Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr17g0564611 Helianthus annuus HOM05D000051 ORTHO05D000015 4.7e-73 277.7 134 100.0
HanXRQChr17g0566531 Helianthus annuus HOM05D000051 ORTHO05D000015 1.0e-32 143.7 125 60.8
HanXRQChr17g0564511 Helianthus annuus HOM05D000051 ORTHO05D000015 2.0e-31 139.4 124 61.3
HanXRQChr17g0564481 Helianthus annuus HOM05D000051 ORTHO05D000015 2.9e-30 135.6 124 59.7
HanXRQChr17g0564701 Helianthus annuus HOM05D000051 ORTHO05D000015 3.2e-29 132.1 126 54.8
HanXRQChr17g0566541 Helianthus annuus HOM05D000051 ORTHO05D000015 3.2e-29 132.1 112 62.5
HanXRQChr17g0564691 Helianthus annuus HOM05D000051 ORTHO05D000015 2.0e-28 129.4 137 51.1
Lsat_1_v5_gn_0_21100 Lactuca sativa HOM05D000051 ORTHO05D000015 1.7e-27 126.3 126 52.4
HanXRQChr17g0564731 Helianthus annuus HOM05D000051 ORTHO05D000015 6.6e-27 124.4 128 53.9
HanXRQChr17g0564661 Helianthus annuus HOM05D000051 ORTHO05D000015 8.6e-27 124.0 123 56.1
HanXRQChr17g0564601 Helianthus annuus HOM05D000051 ORTHO05D000015 1.9e-26 122.9 124 52.4
HanXRQChr17g0564811 Helianthus annuus HOM05D000051 ORTHO05D000015 4.3e-26 121.7 124 51.6
HanXRQChr17g0564721 Helianthus annuus HOM05D000051 ORTHO05D000015 9.5e-26 120.6 126 50.0
HanXRQChr17g0564851 Helianthus annuus HOM05D000051 ORTHO05D000015 2.3e-24 115.9 124 50.8
HanXRQChr17g0564371 Helianthus annuus HOM05D000051 ORTHO05D000015 2.6e-23 112.5 132 50.8
HanXRQChr17g0564791 Helianthus annuus HOM05D000051 ORTHO05D000015 4.9e-22 108.2 124 47.6
Lsat_1_v5_gn_4_29041 Lactuca sativa HOM05D000051 ORTHO05D000015 4.9e-22 108.2 126 46.8
ECA234G3498 Erigeron canadensis HOM05D000051 ORTHO05D000015 9.2e-21 104.0 107 51.4
HanXRQChr17g0564801 Helianthus annuus HOM05D000051 ORTHO05D000015 1.2e-20 103.6 115 47.8
ECA233G3667 Erigeron canadensis HOM05D000051 ORTHO05D000015 1.9e-18 96.3 130 45.4
HanXRQChr11g0349951 Helianthus annuus HOM05D000051 ORTHO05D000015 1.6e-17 93.2 129 43.4
ECA240G2853 Erigeron canadensis HOM05D000014 ORTHO05D012675 3.1e-16 89.0 131 43.5
ECA234G2001 Erigeron canadensis HOM05D000051 ORTHO05D000015 2.0e-15 86.3 81 54.3
Lsat_1_v5_gn_4_29020 Lactuca sativa HOM05D000051 ORTHO05D000015 3.4e-15 85.5 106 44.3
HanXRQChr17g0564461 Helianthus annuus HOM05D000051 ORTHO05D000015 9.9e-15 84.0 72 58.3
HanXRQChr17g0564471 Helianthus annuus HOM05D000051 ORTHO05D000015 4.6e-12 75.1 70 58.6
Psat0s2525g0080 Pisum sativum HOM05D000051 ORTHO05D000015 1.3e-11 73.6 112 34.8
FvH4_6g10000 Fragaria vesca HOM05D000051 ORTHO05D000015 6.6e-11 71.2 124 33.1
TPR.G24941 Trifolium pratense HOM05D000051 ORTHO05D000015 6.6e-11 71.2 112 35.7
FAN14G1913 Fragaria x ananassa HOM05D000051 ORTHO05D000015 8.6e-11 70.9 124 33.1
Medtr3g082890 Medicago truncatula HOM05D000051 ORTHO05D000015 3.3e-10 68.9 77 39.0
TPR.G34678 Trifolium pratense HOM05D003697 ORTHO05D014541 4.3e-10 68.6 113 31.9
Hma1.2p1_1609F.1_g293460 Hydrangea macrophylla HOM05D000051 ORTHO05D000015 5.6e-10 68.2 137 31.4
Migut.M00206 Erythranthe guttata HOM05D000051 ORTHO05D000015 9.6e-10 67.4 126 33.3
Medtr7g081290 Medicago truncatula HOM05D000051 ORTHO05D000015 9.6e-10 67.4 109 33.9
Migut.M00832 Erythranthe guttata HOM05D000051 ORTHO05D000015 1.2e-09 67.0 123 30.9
ECA234G4810 Erigeron canadensis HOM05D000051 ORTHO05D000015 1.6e-09 66.6 88 40.9
MD11G1265300 Malus domestica HOM05D000051 ORTHO05D000015 1.6e-09 66.6 125 32.8
COL.COLO4_35717 Corchorus olitorius HOM05D000051 ORTHO05D000015 2.1e-09 66.2 88 40.9
Migut.M00835 Erythranthe guttata HOM05D000051 ORTHO05D000015 2.1e-09 66.2 111 32.4
Medtr0543s0010 Medicago truncatula HOM05D000051 ORTHO05D000015 2.1e-09 66.2 132 31.1
BcaB01g02570 Brassica carinata HOM05D000051 ORTHO05D000015 2.8e-09 65.9 112 33.0
Medtr4g055580 Medicago truncatula HOM05D000051 ORTHO05D000015 2.8e-09 65.9 96 31.2
Medtr4g056040 Medicago truncatula HOM05D000051 ORTHO05D000015 4.7e-09 65.1 97 29.9
TPR.G12483 Trifolium pratense HOM05D000051 ORTHO05D000015 4.7e-09 65.1 123 31.7
Cc01_g01420 Coffea canephora HOM05D000051 ORTHO05D000015 6.2e-09 64.7 116 31.9
COL.COLO4_35721 Corchorus olitorius HOM05D000051 ORTHO05D000015 8.1e-09 64.3 135 34.8
A02p09160 Brassica napus HOM05D000051 ORTHO05D000015 1.1e-08 63.9 111 30.6
BraA02t05983Z Brassica rapa HOM05D000051 ORTHO05D000015 1.1e-08 63.9 111 30.6
Medtr2g020180 Medicago truncatula HOM05D000051 ORTHO05D000015 1.4e-08 63.5 77 39.0
Medtr4g056020 Medicago truncatula HOM05D000051 ORTHO05D000015 1.8e-08 63.2 92 31.5
Medtr7g033915 Medicago truncatula HOM05D000051 ORTHO05D000015 1.8e-08 63.2 108 32.4
AL7G51940 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 2.4e-08 62.8 130 33.1
BolC3t14007H Brassica oleracea HOM05D000051 ORTHO05D000015 2.4e-08 62.8 112 30.4
Migut.M00548 Erythranthe guttata HOM05D000051 ORTHO05D000015 2.4e-08 62.8 122 29.5
Dinv17488 Davidia involucrata HOM05D000051 ORTHO05D000015 3.1e-08 62.4 107 34.6
Migut.G00068 Erythranthe guttata HOM05D000051 ORTHO05D000015 3.1e-08 62.4 122 33.6
Thhalv10013717m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 4.0e-08 62.0 106 33.0
RcHm_v2.0_Chr5g0028471 Rosa chinensis HOM05D000051 ORTHO05D000015 4.0e-08 62.0 113 34.5
AUR62020610 Chenopodium quinoa HOM05D000051 ORTHO05D000015 5.2e-08 61.6 118 30.5
AUR62028042 Chenopodium quinoa HOM05D000051 ORTHO05D000015 5.2e-08 61.6 147 32.0
Migut.M00627 Erythranthe guttata HOM05D000051 ORTHO05D000015 5.2e-08 61.6 111 31.5
Thhalv10028200m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 5.2e-08 61.6 111 31.5
FvH4_1g06320 Fragaria vesca HOM05D000051 ORTHO05D000015 5.2e-08 61.6 122 33.6
Medtr0492s0020 Medicago truncatula HOM05D000051 ORTHO05D000015 5.2e-08 61.6 100 34.0
QL05p025606 Quercus lobata HOM05D000051 ORTHO05D000015 5.2e-08 61.6 125 30.4
TPR.G38139 Trifolium pratense HOM05D000051 ORTHO05D000015 5.2e-08 61.6 98 33.7
A05p27190 Brassica napus HOM05D000051 ORTHO05D000015 6.8e-08 61.2 112 29.5
C02p15320 Brassica napus HOM05D000051 ORTHO05D000015 6.8e-08 61.2 111 28.8
BolC2t07648H Brassica oleracea HOM05D000051 ORTHO05D000015 6.8e-08 61.2 111 28.8
BraA05t21608Z Brassica rapa HOM05D000051 ORTHO05D000015 6.8e-08 61.2 112 29.5
COL.COLO4_35728 Corchorus olitorius HOM05D000051 ORTHO05D000015 6.8e-08 61.2 118 33.1
Prupe.4G183700 Prunus persica HOM05D000051 ORTHO05D000015 6.8e-08 61.2 112 33.9
RcHm_v2.0_Chr5g0040081 Rosa chinensis HOM05D000051 ORTHO05D000015 6.8e-08 61.2 116 33.6
AUR62009060 Chenopodium quinoa HOM05D000051 ORTHO05D000015 8.9e-08 60.8 121 29.8
Medtr7g033990 Medicago truncatula HOM05D000051 ORTHO05D000015 8.9e-08 60.8 77 37.7
CARHR033430 Cardamine hirsuta HOM05D000051 ORTHO05D000015 1.2e-07 60.5 111 30.6
Dinv17485 Davidia involucrata HOM05D000051 ORTHO05D000015 1.2e-07 60.5 112 30.4
Prupe.4G151700 Prunus persica HOM05D000051 ORTHO05D000015 1.2e-07 60.5 113 30.1
QL05p025638 Quercus lobata HOM05D000051 ORTHO05D000015 1.2e-07 60.5 122 32.8
CARHR129080 Cardamine hirsuta HOM05D000051 ORTHO05D000015 1.5e-07 60.1 126 28.6
CARHR269880 Cardamine hirsuta HOM05D000051 ORTHO05D000015 1.5e-07 60.1 128 29.7
Migut.M00541 Erythranthe guttata HOM05D000051 ORTHO05D000015 1.5e-07 60.1 114 30.7
arahy.Tifrunner.gnm1.ann1.ADY98T Arachis hypogaea HOM05D000051 ORTHO05D000015 2.0e-07 59.7 118 34.7
A03p30200 Brassica napus HOM05D000051 ORTHO05D000015 2.0e-07 59.7 126 27.8
CARHR269930 Cardamine hirsuta HOM05D000051 ORTHO05D000015 2.0e-07 59.7 111 29.7
AUR62028043 Chenopodium quinoa HOM05D000051 ORTHO05D000015 2.6e-07 59.3 127 32.3
Ciclev10018327m.g Citrus clementina HOM05D000051 ORTHO05D000015 2.6e-07 59.3 139 32.4
Medtr1g041245 Medicago truncatula HOM05D000051 ORTHO05D000015 2.6e-07 59.3 113 30.1
TPR.G12476 Trifolium pratense HOM05D000051 ORTHO05D000015 2.6e-07 59.3 77 35.1
Dinv42542 Davidia involucrata HOM05D000051 ORTHO05D000015 3.4e-07 58.9 128 32.0
Migut.M00839 Erythranthe guttata HOM05D000051 ORTHO05D000015 3.4e-07 58.9 116 31.9
Medtr3g115430 Medicago truncatula HOM05D000051 ORTHO05D000015 3.4e-07 58.9 106 34.0
Psat0s3213g0040 Pisum sativum HOM05D000051 ORTHO05D000015 3.4e-07 58.9 118 28.0
CSS0002318 Camellia sinensis var. sinensis HOM05D000051 ORTHO05D000015 4.4e-07 58.5 124 33.1
CSS0008598 Camellia sinensis var. sinensis HOM05D000051 ORTHO05D000015 4.4e-07 58.5 109 33.0
Carub.0007s3593 Capsella rubella HOM05D000051 ORTHO05D000015 4.4e-07 58.5 122 32.8
Prupe.4G161200 Prunus persica HOM05D000051 ORTHO05D000015 4.4e-07 58.5 141 29.8
arahy.Tifrunner.gnm1.ann1.3S1UCG Arachis hypogaea HOM05D000051 ORTHO05D000015 5.8e-07 58.2 126 32.5
arahy.Tifrunner.gnm1.ann1.JKK1Y1 Arachis hypogaea HOM05D000051 ORTHO05D000015 5.8e-07 58.2 126 31.0
BcaC05g28161 Brassica carinata HOM05D000051 ORTHO05D000015 5.8e-07 58.2 112 29.5
C05p41970 Brassica napus HOM05D000051 ORTHO05D000015 5.8e-07 58.2 112 29.5
BolC5t32931H Brassica oleracea HOM05D000051 ORTHO05D000015 5.8e-07 58.2 112 29.5
MD11G1275400 Malus domestica HOM05D000051 ORTHO05D000015 5.8e-07 58.2 88 35.2
PSO478G2955 Papaver somniferum HOM05D000051 ORTHO05D000015 5.8e-07 58.2 125 31.2
TPR.G39088 Trifolium pratense HOM05D000051 ORTHO05D000015 5.8e-07 58.2 108 29.6
AUR62028041 Chenopodium quinoa HOM05D000576 ORTHO05D000368 7.6e-07 57.8 86 34.9
QL05p062747 Quercus lobata HOM05D000051 ORTHO05D000015 7.6e-07 57.8 117 35.0
AT5G38565 Arabidopsis thaliana HOM05D000051 ORTHO05D000015 9.9e-07 57.4 112 32.1
BcaC01g06424 Brassica carinata HOM05D000051 ORTHO05D000015 9.9e-07 57.4 112 30.4
Migut.M00825 Erythranthe guttata HOM05D000051 ORTHO05D000015 9.9e-07 57.4 111 30.6
Medtr7g034115 Medicago truncatula HOM05D000051 ORTHO05D000015 9.9e-07 57.4 101 33.7
Psat0s3611g0160 Pisum sativum HOM05D000051 ORTHO05D000015 9.9e-07 57.4 112 32.1
AT5G38580 Arabidopsis thaliana HOM05D000051 ORTHO05D000015 1.3e-06 57.0 129 32.6
Carub.0001s3076 Capsella rubella HOM05D000051 ORTHO05D000015 1.3e-06 57.0 111 30.6
Migut.M00838 Erythranthe guttata HOM05D000051 ORTHO05D000015 1.3e-06 57.0 111 30.6
Glyma.08G351300 Glycine max HOM05D000051 ORTHO05D000015 1.3e-06 57.0 134 30.6
Lalb_Chr24g0395931 Lupinus albus HOM05D000051 ORTHO05D000015 1.3e-06 57.0 112 31.2
Prupe.4G161000 Prunus persica HOM05D000051 ORTHO05D000015 1.3e-06 57.0 124 29.0
QL08p020517 Quercus lobata HOM05D000051 ORTHO05D000015 1.3e-06 57.0 107 31.8
AL8G32650 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 1.7e-06 56.6 104 29.8
arahy.Tifrunner.gnm1.ann1.SIBV1X Arachis hypogaea HOM05D000051 ORTHO05D000015 1.7e-06 56.6 122 33.6
ECA234G0730 Erigeron canadensis HOM05D000051 ORTHO05D000015 1.7e-06 56.6 58 51.7
Medtr7g056433 Medicago truncatula HOM05D000051 ORTHO05D000015 1.7e-06 56.6 81 32.1
TPR.G12485 Trifolium pratense HOM05D000051 ORTHO05D000015 1.7e-06 56.6 98 29.6
TPR.G2114 Trifolium pratense HOM05D000051 ORTHO05D000015 1.7e-06 56.6 114 31.6
C03p23470 Brassica napus HOM05D000051 ORTHO05D000015 2.2e-06 56.2 129 30.2
CSS0000750 Camellia sinensis var. sinensis HOM05D000051 ORTHO05D000015 2.2e-06 56.2 97 34.0
Dinv38189 Davidia involucrata HOM05D000051 ORTHO05D000015 2.2e-06 56.2 117 29.9
FvH4_3g17090 Fragaria vesca HOM05D000051 ORTHO05D000015 2.2e-06 56.2 126 28.6
Lj1A868T32 Lonicera japonica HOM05D000051 ORTHO05D000015 2.2e-06 56.2 124 29.8
Medtr7g021950 Medicago truncatula HOM05D000051 ORTHO05D000015 2.2e-06 56.2 106 34.0
Medtr7g021990 Medicago truncatula HOM05D000051 ORTHO05D000015 2.2e-06 56.2 106 34.0
PSO017G2530 Papaver somniferum HOM05D000051 ORTHO05D000015 2.2e-06 56.2 124 31.5
arahy.Tifrunner.gnm1.ann1.BWW12Z Arachis hypogaea HOM05D000051 ORTHO05D000015 2.9e-06 55.8 122 32.8
C03p36450 Brassica napus HOM05D000051 ORTHO05D000015 2.9e-06 55.8 117 31.6
BolC3t15957H Brassica oleracea HOM05D000051 ORTHO05D000015 2.9e-06 55.8 117 31.6
Thhalv10015540m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 2.9e-06 55.8 111 29.7
Glyma.18G164600 Glycine max HOM05D000051 ORTHO05D000015 2.9e-06 55.8 115 34.8
Lalb_Chr01g0022261 Lupinus albus HOM05D000051 ORTHO05D000015 2.9e-06 55.8 110 31.8
Medtr3g108560 Medicago truncatula HOM05D000051 ORTHO05D000015 2.9e-06 55.8 132 26.5
Medtr7g032380 Medicago truncatula HOM05D000051 ORTHO05D000015 2.9e-06 55.8 117 28.2
RcHm_v2.0_Chr5g0028401 Rosa chinensis HOM05D000051 ORTHO05D000015 2.9e-06 55.8 126 29.4
AL7G42890 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 3.8e-06 55.5 127 29.1
A03p13450 Brassica napus HOM05D000051 ORTHO05D000015 3.8e-06 55.5 111 28.8
BolC3t14016H Brassica oleracea HOM05D000051 ORTHO05D000015 3.8e-06 55.5 112 31.2
CSS0033794 Camellia sinensis var. sinensis HOM05D000051 ORTHO05D000015 3.8e-06 55.5 75 38.7
CARHR269730 Cardamine hirsuta HOM05D000051 ORTHO05D000015 3.8e-06 55.5 107 30.8
AUR62009188 Chenopodium quinoa HOM05D000051 ORTHO05D004973 3.8e-06 55.5 116 27.6
AUR62028058 Chenopodium quinoa HOM05D000051 ORTHO05D000015 3.8e-06 55.5 95 30.5
Migut.G00077 Erythranthe guttata HOM05D000051 ORTHO05D000015 3.8e-06 55.5 96 34.4
Migut.M00828 Erythranthe guttata HOM05D000051 ORTHO05D000015 3.8e-06 55.5 109 27.5
FvH4_3g21190 Fragaria vesca HOM05D000051 ORTHO05D000015 3.8e-06 55.5 111 33.3
FAN11G3894 Fragaria x ananassa HOM05D000051 ORTHO05D000015 3.8e-06 55.5 111 33.3
Psat5g213760 Pisum sativum HOM05D000051 ORTHO05D000015 3.8e-06 55.5 126 26.2
GSVIVG01038076001 Vitis vinifera HOM05D000051 ORTHO05D000015 3.8e-06 55.5 107 29.9
AT5G44980 Arabidopsis thaliana HOM05D000051 ORTHO05D000015 4.9e-06 55.1 111 32.4
C03p15750 Brassica napus HOM05D000051 ORTHO05D000015 4.9e-06 55.1 111 28.8
BolC2t07647H Brassica oleracea HOM05D000051 ORTHO05D000015 4.9e-06 55.1 106 32.1
BolC3t14743H Brassica oleracea HOM05D000051 ORTHO05D000015 4.9e-06 55.1 129 29.5
Carub.0002s0899 Capsella rubella HOM05D000051 ORTHO05D000015 4.9e-06 55.1 109 33.0
Thhalv10028222m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 4.9e-06 55.1 91 35.2
Lj1A868G40 Lonicera japonica HOM05D000051 ORTHO05D000015 4.9e-06 55.1 129 34.9
Lalb_Chr17g0335911 Lupinus albus HOM05D000051 ORTHO05D000015 4.9e-06 55.1 110 30.0
RcHm_v2.0_Chr5g0028451 Rosa chinensis HOM05D000051 ORTHO05D000015 4.9e-06 55.1 96 30.2
RcHm_v2.0_Chr5g0028461 Rosa chinensis HOM05D000051 ORTHO05D000015 4.9e-06 55.1 82 36.6
vmacro08518 Vaccinium macrocarpon HOM05D000051 ORTHO05D000015 4.9e-06 55.1 141 29.1
AT1G32375 Arabidopsis thaliana HOM05D000051 ORTHO05D000015 6.4e-06 54.7 111 29.7
arahy.Tifrunner.gnm1.ann1.9JS9NA Arachis hypogaea HOM05D000051 ORTHO05D000015 6.4e-06 54.7 120 29.2
A04p11540 Brassica napus HOM05D000051 ORTHO05D000015 6.4e-06 54.7 111 30.6
C04p45280 Brassica napus HOM05D000051 ORTHO05D000015 6.4e-06 54.7 111 30.6
BolC4t26111H Brassica oleracea HOM05D000051 ORTHO05D000015 6.4e-06 54.7 111 30.6
BraA04t16819Z Brassica rapa HOM05D000051 ORTHO05D000015 6.4e-06 54.7 111 30.6
CSS0019187 Camellia sinensis var. sinensis HOM05D000051 ORTHO05D000015 6.4e-06 54.7 75 38.7
FvH4_3g20090 Fragaria vesca HOM05D000051 ORTHO05D000015 6.4e-06 54.7 115 28.7
MD03G1276400 Malus domestica HOM05D000051 ORTHO05D000015 6.4e-06 54.7 119 27.7
Medtr5g092960 Medicago truncatula HOM05D000051 ORTHO05D000015 6.4e-06 54.7 116 29.3
RcHm_v2.0_Chr6g0309621 Rosa chinensis HOM05D000051 ORTHO05D000015 6.4e-06 54.7 133 29.3
arahy.Tifrunner.gnm1.ann1.YXHH77 Arachis hypogaea HOM05D000051 ORTHO05D000015 8.4e-06 54.3 120 29.2
Carub.0005s1791 Capsella rubella HOM05D000051 ORTHO05D000015 8.4e-06 54.3 124 30.6
Carub.0008s1381 Capsella rubella HOM05D000051 ORTHO05D000015 8.4e-06 54.3 122 30.3
Carub.0008s1388 Capsella rubella HOM05D000051 ORTHO05D000015 8.4e-06 54.3 120 30.0
Medtr8g077460 Medicago truncatula HOM05D000051 ORTHO05D000015 8.4e-06 54.3 106 29.2
Psat5g042320 Pisum sativum HOM05D000051 ORTHO05D000015 8.4e-06 54.3 77 32.5
RcHm_v2.0_Chr5g0028391 Rosa chinensis HOM05D000051 ORTHO05D000015 8.4e-06 54.3 131 29.8


User provided reference genes

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