Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr17g0562131 Helianthus annuus HOM05D006382 ORTHO05D008938 1.6e-296 1021.9 490 100.0
ECA234G1133 Erigeron canadensis HOM05D006382 ORTHO05D008938 4.9e-237 824.3 450 88.2
Lsat_1_v5_gn_4_35160 Lactuca sativa HOM05D006382 ORTHO05D008938 9.5e-225 783.5 512 76.0
Dinv43864 Davidia involucrata HOM05D006382 ORTHO05D008938 1.6e-219 766.1 452 79.6
Thecc.01G352300 Theobroma cacao HOM05D006382 ORTHO05D008938 2.7e-219 765.4 485 74.0
Duzib133G1372 Durio zibethinus HOM05D006382 ORTHO05D008938 3.5e-219 765.0 456 77.6
Gohir.A11G092400 Gossypium hirsutum HOM05D006382 ORTHO05D008938 4.6e-219 764.6 481 74.8
Actinidia20164 Actinidia chinensis HOM05D006382 ORTHO05D008938 7.8e-219 763.8 453 79.0
RcHm_v2.0_Chr1g0357731 Rosa chinensis HOM05D006382 ORTHO05D008938 2.5e-217 758.8 476 75.6
GSVIVG01026968001 Vitis vinifera HOM05D006382 ORTHO05D008938 3.3e-217 758.4 462 76.4
Gorai.007G103500 Gossypium raimondii HOM05D006382 ORTHO05D008938 7.3e-217 757.3 482 74.3
Lj9C589T7 Lonicera japonica HOM05D006382 ORTHO05D008938 3.6e-216 755.0 506 72.1
Hma1.2p1_0335F.1_g128860 Hydrangea macrophylla HOM05D006382 ORTHO05D008938 8.1e-216 753.8 460 77.2
Aqoxy7G00230 Aquilegia oxysepala HOM05D006382 ORTHO05D008938 1.1e-215 753.4 454 76.7
Prupe.2G177700 Prunus persica HOM05D006382 ORTHO05D008938 2.4e-215 752.3 460 75.7
Potri.002G164700 Populus trichocarpa HOM05D006382 ORTHO05D008938 5.3e-215 751.1 460 75.4
Cpa.g.sc11.72 Carica papaya HOM05D006382 ORTHO05D008938 2.0e-214 749.2 453 76.8
MSTRG.17299 Avicennia marina HOM05D006382 ORTHO05D008938 1.7e-213 746.1 451 76.9
Atru.chr5.564 Acer truncatum HOM05D006382 ORTHO05D008938 2.2e-213 745.7 460 76.5
FAN01G1899 Fragaria x ananassa HOM05D006382 ORTHO05D008938 2.2e-213 745.7 475 74.5
Cfa003871 Carpinus fangiana HOM05D006382 ORTHO05D008938 2.9e-213 745.3 467 74.7
FvH4_7g15410 Fragaria vesca HOM05D006382 ORTHO05D008938 2.9e-213 745.3 475 74.5
MD01G1071500 Malus domestica HOM05D006382 ORTHO05D008938 3.8e-213 745.0 452 76.1
TWI59G0052 Tripterygium wilfordii HOM05D006382 ORTHO05D008938 1.9e-212 742.7 454 75.6
DCAR_005361 Daucus carota HOM05D006382 ORTHO05D008938 3.2e-212 741.9 451 74.9
Nitab4.5_0000915g0130 Nicotiana tabacum HOM05D006382 ORTHO05D008938 3.2e-212 741.9 500 69.8
Lj1g0001840 Lotus japonicus HOM05D006382 ORTHO05D008938 4.6e-211 738.0 488 71.9
CSS0031254 Camellia sinensis var. sinensis HOM05D006382 ORTHO05D008938 7.8e-211 737.3 466 74.0
vmacro13226 Vaccinium macrocarpon HOM05D006382 ORTHO05D008938 1.0e-210 736.9 471 73.7
Nn1g01689 Nelumbo nucifera HOM05D006382 ORTHO05D008938 3.0e-210 735.3 455 74.5
Eucgr.D02325 Eucalyptus grandis HOM05D006382 ORTHO05D008938 6.6e-210 734.2 482 72.0
CiPaw.01G067600 Carya illinoinensis HOM05D006382 ORTHO05D008938 3.3e-209 731.9 452 75.9
Sabra02G0146800 Salix brachista HOM05D006382 ORTHO05D008938 4.3e-209 731.5 482 71.4
Oeu063675.1 Olea europaea HOM05D006382 ORTHO05D008938 9.6e-209 730.3 479 72.7
Sed0009049 Sechium edule HOM05D006382 ORTHO05D008938 9.6e-209 730.3 489 72.6
QL04p055600 Quercus lobata HOM05D006382 ORTHO05D008938 2.1e-208 729.2 455 74.7
SalBow3G4256 Salvia bowleyana HOM05D006382 ORTHO05D008938 2.1e-208 729.2 462 73.4
SGA_v2.0_scaffold4G02278 Striga asiatica HOM05D006382 ORTHO05D008938 2.1e-208 729.2 490 70.4
FAN06G2792 Fragaria x ananassa HOM05D006382 ORTHO05D008938 1.1e-207 726.9 504 70.0
Lalb_Chr19g0126881 Lupinus albus HOM05D006382 ORTHO05D008938 1.1e-207 726.9 491 69.5
Peaxi162Scf00020g01516 Petunia axillaris HOM05D006382 ORTHO05D008938 1.8e-207 726.1 485 71.3
Sopen01g038910 Solanum pennellii HOM05D006382 ORTHO05D008938 1.8e-207 726.1 456 73.7
PGSC0003DMG400000065 Solanum tuberosum HOM05D006382 ORTHO05D008938 2.4e-207 725.7 456 73.5
FAN03G1976 Fragaria x ananassa HOM05D006382 ORTHO05D008938 3.1e-207 725.3 496 70.6
PSO266G0056 Papaver somniferum HOM05D006382 ORTHO05D008938 4.0e-207 724.9 500 69.8
CSS0000318 Camellia sinensis var. sinensis HOM05D006382 ORTHO05D008938 9.0e-207 723.8 459 74.7
PSO384G0256 Papaver somniferum HOM05D006382 ORTHO05D008938 9.0e-207 723.8 507 68.8
Sc01g0003200 Simmondsia chinensis HOM05D006382 ORTHO05D008938 1.5e-206 723.0 462 72.9
MELO3C006077.2 Cucumis melo HOM05D006382 ORTHO05D008938 4.5e-206 721.5 451 74.5
Solyc01g095120.3 Solanum lycopersicum HOM05D006382 ORTHO05D008938 4.5e-206 721.5 454 73.6
AT3G61540 Arabidopsis thaliana HOM05D006382 ORTHO05D008938 5.8e-206 721.1 476 71.2
THA.LOC104827604 Tarenaya hassleriana HOM05D006382 ORTHO05D008938 5.8e-206 721.1 454 73.8
Atru.BG.55.p Acer truncatum HOM05D006382 ORTHO05D008938 7.6e-206 720.7 452 75.4
Rhsim07G0010300 Rhododendron simsii HOM05D006382 ORTHO05D008938 7.6e-206 720.7 452 74.8
Cc02_g38570 Coffea canephora HOM05D006382 ORTHO05D008938 2.9e-205 718.8 455 74.9
HPP92_008800 Vanilla planifolia HOM05D006382 ORTHO05D008938 5.4e-204 714.5 451 72.5
Carub.0005s2823 Capsella rubella HOM05D006382 ORTHO05D008938 7.1e-204 714.1 453 72.8
C06p27550 Brassica napus HOM05D006382 ORTHO05D008938 1.2e-203 713.4 452 72.6
Nitab4.5_0010695g0050 Nicotiana tabacum HOM05D006382 ORTHO05D008938 1.2e-203 713.4 518 66.4
Phvul.008G058200 Phaseolus vulgaris HOM05D006382 ORTHO05D008938 1.6e-203 713.0 495 68.7
Actinidia10076 Actinidia chinensis HOM05D006382 ORTHO05D008938 2.1e-203 712.6 432 77.5
AUR62004414 Chenopodium quinoa HOM05D006382 ORTHO05D008938 3.5e-203 711.8 491 68.0
Thhalv10005890m.g Eutrema salsugineum HOM05D006382 ORTHO05D008938 6.0e-203 711.1 463 72.1
AL5G43900 Arabidopsis lyrata HOM05D006382 ORTHO05D008938 7.9e-203 710.7 452 72.6
BcaC08g45134 Brassica carinata HOM05D006382 ORTHO05D008938 7.9e-203 710.7 452 72.1
CARHR171860 Cardamine hirsuta HOM05D006382 ORTHO05D008938 1.0e-202 710.3 478 69.9
EL10Ac1g00353 Beta vulgaris HOM05D006382 ORTHO05D008938 1.8e-202 709.5 477 69.0
Ciclev10019743m.g Citrus clementina HOM05D006382 ORTHO05D008938 1.8e-202 709.5 452 73.5
BraA07t30197Z Brassica rapa HOM05D006382 ORTHO05D008938 2.3e-202 709.1 464 70.7
VMungo1383G3370 Vigna mungo HOM05D006382 ORTHO05D008938 2.3e-202 709.1 452 72.1
BolC6t37923H Brassica oleracea HOM05D006382 ORTHO05D008938 3.0e-202 708.8 452 72.1
CsaV3_3G008570 Cucumis sativus L. HOM05D006382 ORTHO05D008938 3.0e-202 708.8 451 73.4
Medtr7g079030 Medicago truncatula HOM05D006382 ORTHO05D008938 3.0e-202 708.8 464 70.7
A07p25560 Brassica napus HOM05D006382 ORTHO05D008938 3.9e-202 708.4 452 72.1
ClCG05G001220 Citrullus lanatus HOM05D006382 ORTHO05D008938 5.1e-202 708.0 495 68.9
ATR0721G029 Amborella trichopoda HOM05D006382 ORTHO05D008938 1.5e-201 706.4 454 73.1
CANSAT56G1207 Cannabis sativa HOM05D006382 ORTHO05D008938 1.5e-201 706.4 462 70.8
arahy.Tifrunner.gnm1.ann1.FF5BCH Arachis hypogaea HOM05D006382 ORTHO05D008938 5.6e-201 704.5 471 70.1
arahy.Tifrunner.gnm1.ann1.Z348XU Arachis hypogaea HOM05D006382 ORTHO05D008938 7.4e-201 704.1 471 70.1
BcaB02g07372 Brassica carinata HOM05D006382 ORTHO05D008938 9.6e-201 703.7 465 70.3
Glyma.18G238400 Glycine max HOM05D006382 ORTHO05D008938 4.8e-200 701.4 452 71.7
FAN06G0271 Fragaria x ananassa HOM05D006382 ORTHO05D008938 6.2e-200 701.0 460 72.4
Psat3g105480 Pisum sativum HOM05D006382 ORTHO05D008938 4.0e-199 698.4 518 64.7
MBI06_g33533_MAGBIO Magnolia biondii HOM05D006382 ORTHO05D008938 5.3e-199 698.0 453 71.5
Haze_15566 Corylus avellana HOM05D006382 ORTHO05D008938 2.6e-198 695.7 494 67.8
Sp5g01870 Schrenkiella parvula HOM05D006382 ORTHO05D008938 2.6e-198 695.7 452 71.7
Ca_07943_v3 Cicer arietinum L. HOM05D006382 ORTHO05D008938 7.6e-198 694.1 445 72.6
TPR.G35789 Trifolium pratense HOM05D006382 ORTHO05D008938 1.0e-197 693.7 474 68.8
Glyma.09G254600 Glycine max HOM05D006382 ORTHO05D008938 2.5e-196 689.1 452 70.8
CDE10G0280 Ceratophyllum demersum HOM05D006382 ORTHO05D008938 1.2e-195 686.8 500 64.6
Pp3c20_22770 Physcomitrium patens HOM05D006382 ORTHO05D008938 3.1e-183 645.6 460 64.6
Aa31LG10G15440 Aethionema arabicum HOM05D006382 ORTHO05D008938 3.4e-182 642.1 437 69.3
CANSAT56G3955 Cannabis sativa HOM05D006382 ORTHO05D008938 8.5e-181 637.5 458 66.4
SMO134G0292 Selaginella moellendorffii HOM05D006382 ORTHO05D008938 3.0e-178 629.0 444 66.7
AUR62022620 Chenopodium quinoa HOM05D006382 ORTHO05D008938 2.2e-173 612.8 493 61.3
COL.COLO4_12779 Corchorus olitorius HOM05D006382 ORTHO05D008938 1.9e-172 609.8 455 65.7
unitig_747.g21323 Utricularia gibba HOM05D000887 ORTHO05D000908 9.4e-172 607.4 499 60.7
Mapoly0179s0013 Marchantia polymorpha HOM05D006382 ORTHO05D008938 1.6e-171 606.7 443 63.4
Ah.05g180140 Amaranthus hybridus HOM05D006382 ORTHO05D008938 6.1e-171 604.7 474 61.6
CAN.G78.131 Capsicum annuum HOM05D006382 ORTHO05D008938 2.2e-165 586.3 366 74.0
Gohir.D11G097200 Gossypium hirsutum HOM05D006382 ORTHO05D008938 2.5e-164 582.8 385 71.4
Migut.B01800 Erythranthe guttata HOM05D006382 ORTHO05D008938 2.8e-160 569.3 481 59.9
Manes.05G029200 Manihot esculenta HOM05D006382 ORTHO05D008938 2.5e-156 556.2 364 71.4
TAR629G1903 Trochodendron aralioides HOM05D006382 ORTHO05D008938 1.9e-132 476.9 299 73.2
Oeu063676.1 Olea europaea HOM05D006382 ORTHO05D008938 1.4e-127 460.7 482 52.1
Cre03.g193700 Chlamydomonas reinhardtii HOM05D006382 ORTHO05D008938 1.5e-124 450.7 450 50.4
MCO14G065 Micromonas commoda HOM05D006382 ORTHO05D008938 3.9e-117 426.0 471 48.6
Potri.014G090601 Populus trichocarpa HOM05D006382 ORTHO05D008938 1.8e-114 417.2 270 73.3
Zm00001eb375690 Zea mays HOM05D006382 ORTHO05D008938 2.2e-104 383.6 281 65.5
PRCOL_00004635 Prasinoderma coloniale HOM05D006382 ORTHO05D008938 7.8e-102 375.2 464 44.8
Cfa025852 Carpinus fangiana HOM05D006382 ORTHO05D008938 2.8e-83 313.5 449 39.6
Os06g0163600 Oryza sativa ssp. japonica HOM05D006382 ORTHO05D008938 2.0e-41 174.5 100 78.0
SMO139G0016 Selaginella moellendorffii HOM05D006382 ORTHO05D376983 7.7e-41 172.6 224 44.2
Hma1.2p1_0036F.1_g022810 Hydrangea macrophylla HOM05D006382 ORTHO05D228417 1.9e-31 141.4 95 69.5
Hma1.2p1_0036F.1_g022815 Hydrangea macrophylla HOM05D006382 ORTHO05D228242 1.9e-31 141.4 95 69.5
Hma1.2p1_0515F.1_g170355 Hydrangea macrophylla HOM05D006382 ORTHO05D228454 1.9e-31 141.4 95 69.5
Hma1.2p1_1019F.1_g248455 Hydrangea macrophylla HOM05D006382 ORTHO05D228422 1.9e-31 141.4 95 69.5
SMO165G0168 Selaginella moellendorffii HOM05D006382 ORTHO05D374182 1.3e-27 128.6 277 32.1
BolC4t24936H Brassica oleracea HOM05D006382 ORTHO05D024383 1.7e-24 118.2 78 66.7
C04p33670 Brassica napus HOM05D006382 ORTHO05D024383 2.0e-17 94.7 63 66.7
BcaB04g18088 Brassica carinata HOM05D006382 ORTHO05D024383 2.9e-11 74.3 43 81.4
Ah.05g180150 Amaranthus hybridus HOM05D006382 ORTHO05D060446 7.8e-09 66.2 79 45.6
Actinidia17930 Actinidia chinensis HOM05D006382 ORTHO05D008938 5.6e-07 60.1 41 73.2
BcaC08g45232 Brassica carinata HOM05D000289 ORTHO05D000208 5.6e-07 60.1 49 53.1
CsaV3_3G008600 Cucumis sativus L. HOM05D006382 ORTHO05D172594 2.8e-06 57.8 38 63.2
Mapoly0001s0344 Marchantia polymorpha HOM05D006483 ORTHO05D007837 8.1e-06 56.2 125 32.8


User provided reference genes

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