Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr17g0559491 Helianthus annuus HOM05D003263 ORTHO05D004801 2.5e-80 302.0 148 100.0
HanXRQChr14g0444641 Helianthus annuus HOM05D003263 ORTHO05D004801 2.8e-71 271.9 134 98.5
HanXRQChr07g0191741 Helianthus annuus HOM05D003263 ORTHO05D004801 4.8e-63 244.6 139 87.8
Lsat_1_v5_gn_3_63961 Lactuca sativa HOM05D003263 ORTHO05D004801 3.8e-60 235.0 140 85.7
ECA238G3173 Erigeron canadensis HOM05D003263 ORTHO05D004801 4.7e-58 228.0 140 83.6
SGA_v2.0_scaffold108G30966 Striga asiatica HOM05D003263 ORTHO05D004801 1.1e-54 216.9 138 81.2
arahy.Tifrunner.gnm1.ann1.ZZ0CH2 Arachis hypogaea HOM05D003263 ORTHO05D004801 1.4e-54 216.5 141 80.1
SGA_v2.0_scaffold2G00947 Striga asiatica HOM05D003263 ORTHO05D004801 1.4e-54 216.5 138 79.0
Migut.K00926 Erythranthe guttata HOM05D003263 ORTHO05D004801 4.1e-54 214.9 135 80.7
Actinidia28797 Actinidia chinensis HOM05D003263 ORTHO05D004801 5.3e-54 214.5 139 77.7
arahy.Tifrunner.gnm1.ann1.AUXW6G Arachis hypogaea HOM05D003263 ORTHO05D004801 7.0e-54 214.2 139 80.6
Manes.02G078500 Manihot esculenta HOM05D003263 ORTHO05D004801 7.0e-54 214.2 139 79.1
Dinv28178 Davidia involucrata HOM05D003263 ORTHO05D004801 9.1e-54 213.8 142 78.2
Oeu062704.1 Olea europaea HOM05D003263 ORTHO05D004801 1.6e-53 213.0 138 77.5
Oeu030292.1 Olea europaea HOM05D003263 ORTHO05D004801 2.0e-53 212.6 138 79.0
Migut.H02232 Erythranthe guttata HOM05D003263 ORTHO05D004801 4.5e-53 211.5 138 78.3
Manes.01G120700 Manihot esculenta HOM05D003263 ORTHO05D004801 4.5e-53 211.5 137 78.8
CSS0018871 Camellia sinensis var. sinensis HOM05D003263 ORTHO05D004801 5.9e-53 211.1 138 78.3
Dinv19049 Davidia involucrata HOM05D003263 ORTHO05D004801 7.7e-53 210.7 143 78.3
Actinidia35722 Actinidia chinensis HOM05D003263 ORTHO05D004801 1.3e-52 209.9 141 78.0
Nitab4.5_0006562g0010 Nicotiana tabacum HOM05D003263 ORTHO05D004801 1.7e-52 209.5 138 78.3
Nitab4.5_0011135g0010 Nicotiana tabacum HOM05D003263 ORTHO05D004801 1.7e-52 209.5 138 78.3
Ca_17086_v3 Cicer arietinum L. HOM05D003263 ORTHO05D004801 2.9e-52 208.8 141 76.6
MSTRG.15657 Avicennia marina HOM05D003263 ORTHO05D004801 3.8e-52 208.4 139 76.3
MSTRG.3699 Avicennia marina HOM05D003263 ORTHO05D004801 6.5e-52 207.6 138 76.8
vmacro18524 Vaccinium macrocarpon HOM05D003263 ORTHO05D004801 1.1e-51 206.8 140 77.1
Ciclev10019002m.g Citrus clementina HOM05D003263 ORTHO05D004801 1.5e-51 206.5 137 76.6
Lj6g0025109 Lotus japonicus HOM05D003263 ORTHO05D004801 1.5e-51 206.5 140 78.6
PGR042G3530 Punica granatum HOM05D003263 ORTHO05D004801 1.5e-51 206.5 140 75.7
CAN.G222.62 Capsicum annuum HOM05D003263 ORTHO05D004801 1.9e-51 206.1 139 77.0
Sopen11g006260 Solanum pennellii HOM05D003263 ORTHO05D004801 3.2e-51 205.3 136 77.2
Lalb_Chr15g0085021 Lupinus albus HOM05D003263 ORTHO05D004801 4.2e-51 204.9 139 76.3
Rhsim08G0019700 Rhododendron simsii HOM05D003263 ORTHO05D004801 7.2e-51 204.1 139 76.3
SalBow5G3125 Salvia bowleyana HOM05D003263 ORTHO05D004801 7.2e-51 204.1 139 76.3
CiPaw.03G074100 Carya illinoinensis HOM05D003263 ORTHO05D004801 9.4e-51 203.8 141 75.2
PGSC0003DMG400013309 Solanum tuberosum HOM05D003263 ORTHO05D004801 9.4e-51 203.8 136 76.5
Solyc11g011470.2 Solanum lycopersicum HOM05D003263 ORTHO05D004801 1.2e-50 203.4 137 75.9
Atru.chr1.2038 Acer truncatum HOM05D003263 ORTHO05D004801 2.1e-50 202.6 137 76.6
TPR.G23206 Trifolium pratense HOM05D003263 ORTHO05D004801 2.1e-50 202.6 140 75.7
THA.LOC104822242 Tarenaya hassleriana HOM05D003263 ORTHO05D004801 2.7e-50 202.2 142 75.4
Cpa.g.sc116.77 Carica papaya HOM05D003263 ORTHO05D004801 3.6e-50 201.8 140 72.9
Eucgr.J01621 Eucalyptus grandis HOM05D003263 ORTHO05D004801 6.1e-50 201.1 141 75.9
Glyma.11G214800 Glycine max HOM05D003263 ORTHO05D004801 6.1e-50 201.1 144 75.0
Glyma.18G041700 Glycine max HOM05D003263 ORTHO05D004801 6.1e-50 201.1 142 76.8
Medtr3g065130 Medicago truncatula HOM05D003263 ORTHO05D004801 8.0e-50 200.7 139 75.5
Phvul.001G229000 Phaseolus vulgaris HOM05D003263 ORTHO05D004801 8.0e-50 200.7 141 77.3
Potri.004G082800 Populus trichocarpa HOM05D003263 ORTHO05D004801 1.0e-49 200.3 134 73.9
VMungo1383G2082 Vigna mungo HOM05D003263 ORTHO05D004801 1.4e-49 199.9 141 77.3
Peaxi162Scf00464g00325 Petunia axillaris HOM05D003263 ORTHO05D004801 2.3e-49 199.1 136 75.0
THA.LOC104805635 Tarenaya hassleriana HOM05D003263 ORTHO05D004801 2.3e-49 199.1 141 76.6
Lalb_Chr18g0053541 Lupinus albus HOM05D003263 ORTHO05D004801 3.0e-49 198.7 140 74.3
Psat5g119880 Pisum sativum HOM05D003263 ORTHO05D004801 3.0e-49 198.7 142 74.6
TAR629G0765 Trochodendron aralioides HOM05D003263 ORTHO05D004801 3.0e-49 198.7 143 72.0
TWI74G0116 Tripterygium wilfordii HOM05D003263 ORTHO05D004801 5.2e-49 198.0 142 73.2
TWI77G0544 Tripterygium wilfordii HOM05D003263 ORTHO05D004801 1.2e-48 196.8 142 72.5
Thhalv10027640m.g Eutrema salsugineum HOM05D003263 ORTHO05D004801 4.4e-48 194.9 141 72.3
Gohir.D07G183900 Gossypium hirsutum HOM05D003263 ORTHO05D004801 4.4e-48 194.9 139 71.9
Potri.017G136133 Populus trichocarpa HOM05D003263 ORTHO05D004801 4.4e-48 194.9 135 72.6
Sed0005557 Sechium edule HOM05D003263 ORTHO05D004801 4.4e-48 194.9 140 72.1
unitig_748.g8633 Utricularia gibba HOM05D003263 ORTHO05D004801 4.4e-48 194.9 142 73.2
AL7G46270 Arabidopsis lyrata HOM05D003263 ORTHO05D004801 5.7e-48 194.5 140 72.9
AT5G37510 Arabidopsis thaliana HOM05D003263 ORTHO05D004801 5.7e-48 194.5 140 72.9
FAN23G0774 Fragaria x ananassa HOM05D003263 ORTHO05D004801 5.7e-48 194.5 138 74.6
FAN26G0816 Fragaria x ananassa HOM05D003263 ORTHO05D004801 5.7e-48 194.5 138 74.6
RcHm_v2.0_Chr3g0491991 Rosa chinensis HOM05D003263 ORTHO05D004801 9.8e-48 193.7 141 73.0
BcaB06g27086 Brassica carinata HOM05D003263 ORTHO05D004801 1.3e-47 193.4 141 71.6
A04p10660 Brassica napus HOM05D003263 ORTHO05D004801 1.3e-47 193.4 141 71.6
BraA04t16733Z Brassica rapa HOM05D003263 ORTHO05D004801 1.3e-47 193.4 141 71.6
Gorai.001G197100 Gossypium raimondii HOM05D003263 ORTHO05D004801 1.7e-47 193.0 139 70.5
MD17G1267300 Malus domestica HOM05D003263 ORTHO05D004801 2.2e-47 192.6 144 70.8
Prupe.3G165400 Prunus persica HOM05D003263 ORTHO05D004801 2.2e-47 192.6 143 71.3
Aa31LG9G17520 Aethionema arabicum HOM05D003263 ORTHO05D004801 2.8e-47 192.2 145 71.7
CARHR215400 Cardamine hirsuta HOM05D003263 ORTHO05D004801 2.8e-47 192.2 140 70.7
MD09G1268900 Malus domestica HOM05D003263 ORTHO05D004801 3.7e-47 191.8 144 70.8
Nn4g24447 Nelumbo nucifera HOM05D003263 ORTHO05D004801 6.3e-47 191.0 145 71.0
Aa31LG9G17530 Aethionema arabicum HOM05D003263 ORTHO05D004801 8.3e-47 190.7 142 72.5
BcaC02g09578 Brassica carinata HOM05D003263 ORTHO05D004801 1.1e-46 190.3 141 70.9
BolC4t26009H Brassica oleracea HOM05D003263 ORTHO05D004801 1.1e-46 190.3 141 70.9
TAR371G0371 Trochodendron aralioides HOM05D003263 ORTHO05D004801 1.1e-46 190.3 149 68.5
CDE05G1041 Ceratophyllum demersum HOM05D003263 ORTHO05D004801 1.4e-46 189.9 149 67.1
C04p44380 Brassica napus HOM05D003263 ORTHO05D004801 2.4e-46 189.1 141 70.2
CANSAT56G4352 Cannabis sativa HOM05D003263 ORTHO05D004801 2.4e-46 189.1 143 69.9
Carub.0007s3268 Capsella rubella HOM05D003263 ORTHO05D004801 3.1e-46 188.7 140 69.3
AL1G43210 Arabidopsis lyrata HOM05D003263 ORTHO05D004801 4.1e-46 188.3 142 71.8
CDE05G1320 Ceratophyllum demersum HOM05D003263 ORTHO05D004801 5.4e-46 188.0 149 66.4
Gorai.001G204300 Gossypium raimondii HOM05D003263 ORTHO05D004801 5.4e-46 188.0 138 69.6
Duzib133G1400 Durio zibethinus HOM05D003263 ORTHO05D004801 7.0e-46 187.6 138 70.3
ClCG05G010610 Citrullus lanatus HOM05D003263 ORTHO05D004801 9.1e-46 187.2 142 69.7
Thecc.04G063600 Theobroma cacao HOM05D003263 ORTHO05D004801 9.1e-46 187.2 139 70.5
Thecc.K0008100 Theobroma cacao HOM05D003263 ORTHO05D004801 9.1e-46 187.2 139 70.5
Aqoxy3G04075 Aquilegia oxysepala HOM05D003263 ORTHO05D004801 1.6e-45 186.4 121 75.2
FvH4_1g30070 Fragaria vesca HOM05D003263 ORTHO05D004801 2.0e-45 186.0 137 70.8
DCAR_014159 Daucus carota HOM05D003263 ORTHO05D004801 3.5e-45 185.3 137 71.5
Gohir.A07G176600 Gossypium hirsutum HOM05D003263 ORTHO05D004801 5.9e-45 184.5 138 68.1
PSO478G1645 Papaver somniferum HOM05D003263 ORTHO05D004801 5.9e-45 184.5 150 67.3
MELO3C020331.2 Cucumis melo HOM05D003263 ORTHO05D004801 2.3e-44 182.6 144 68.1
PSO017G4553 Papaver somniferum HOM05D003263 ORTHO05D004801 2.3e-44 182.6 150 66.7
CsaV3_3G017880 Cucumis sativus L. HOM05D003263 ORTHO05D004801 2.9e-44 182.2 144 68.1
Cfa007786 Carpinus fangiana HOM05D003263 ORTHO05D004801 3.8e-44 181.8 140 69.3
Sed0016313 Sechium edule HOM05D003263 ORTHO05D004801 6.5e-44 181.0 140 68.6
Haze_14285 Corylus avellana HOM05D003263 ORTHO05D004801 8.6e-44 180.6 143 69.2
Duzib138G0925 Durio zibethinus HOM05D003263 ORTHO05D004801 1.5e-43 179.9 138 66.7
COL.COLO4_13315 Corchorus olitorius HOM05D003263 ORTHO05D004801 3.3e-43 178.7 137 68.6
Ah.10g032470 Amaranthus hybridus HOM05D003263 ORTHO05D004801 4.2e-43 178.3 136 66.9
Ah.10g032480 Amaranthus hybridus HOM05D003263 ORTHO05D004801 4.2e-43 178.3 136 66.9
HPP92_020298 Vanilla planifolia HOM05D003263 ORTHO05D004801 7.2e-43 177.6 131 71.8
EL10Ac2g03207 Beta vulgaris HOM05D003263 ORTHO05D004801 9.5e-43 177.2 143 65.0
AUR62037782 Chenopodium quinoa HOM05D003263 ORTHO05D004801 1.6e-42 176.4 142 66.2
FAN19G0316 Fragaria x ananassa HOM05D003263 ORTHO05D004801 1.6e-42 176.4 96 86.5
MBI19_g09384_MAGBIO Magnolia biondii HOM05D003263 ORTHO05D004801 6.1e-42 174.5 137 68.6
QL02p059434 Quercus lobata HOM05D003263 ORTHO05D004801 8.9e-41 170.6 140 63.6
SHI30113 Sapria himalayana HOM05D003263 ORTHO05D004801 1.3e-39 166.8 137 68.6
Sc14g0006900 Simmondsia chinensis HOM05D003263 ORTHO05D004801 1.3e-39 166.8 140 64.3
Eucgr.J01637 Eucalyptus grandis HOM05D003263 ORTHO05D004801 1.4e-38 163.3 139 65.5
Hund13092 Selenicereus undatus HOM05D003263 ORTHO05D004801 5.4e-38 161.4 86 86.0
ATR0118G003 Amborella trichopoda HOM05D003263 ORTHO05D004801 1.2e-37 160.2 164 57.9
Zm00001eb216210 Zea mays HOM05D003263 ORTHO05D004801 3.5e-37 158.7 113 71.7
Os03g0713400 Oryza sativa ssp. japonica HOM05D003263 ORTHO05D004801 1.3e-36 156.8 113 70.8
Migut.M00197 Erythranthe guttata HOM05D003263 ORTHO05D004801 1.7e-36 156.4 105 74.3
Zm00001eb055050 Zea mays HOM05D003263 ORTHO05D004801 5.0e-36 154.8 113 70.8
QL04p097132 Quercus lobata HOM05D003263 ORTHO05D000041 4.7e-34 148.3 89 77.5
AUR62042225 Chenopodium quinoa HOM05D003263 ORTHO05D004801 1.4e-30 136.7 136 57.4
SEGI_21193 Sequoiadendron giganteum HOM05D003263 ORTHO05D004801 2.0e-29 132.9 101 68.3
Cc04_g05630 Coffea canephora HOM05D003263 ORTHO05D004801 5.0e-28 128.3 139 56.8
CBR_g6354 Chara braunii HOM05D003263 ORTHO05D004801 8.6e-28 127.5 69 82.6
Mapoly0153s0030 Marchantia polymorpha HOM05D003263 ORTHO05D004801 1.9e-27 126.3 72 80.6
SMO331G0029 Selaginella moellendorffii HOM05D003263 ORTHO05D004801 1.9e-27 126.3 73 76.7
AagrBONN_evm.TU.Sc2ySwM_228.2430 Anthoceros agrestis HOM05D003263 ORTHO05D004801 6.2e-26 121.3 67 80.6
Cre12.g535950 Chlamydomonas reinhardtii HOM05D003263 ORTHO05D004801 6.2e-26 121.3 69 81.2
Pp3c1_34100 Physcomitrium patens HOM05D003263 ORTHO05D004801 6.2e-26 121.3 69 79.7
Pp3c1_34110 Physcomitrium patens HOM05D003263 ORTHO05D004801 6.2e-26 121.3 69 79.7
Pp3c1_34140 Physcomitrium patens HOM05D003263 ORTHO05D004801 6.2e-26 121.3 69 79.7
Pp3c19_19270 Physcomitrium patens HOM05D003263 ORTHO05D004801 1.1e-25 120.6 82 72.0
CSS0022568 Camellia sinensis var. sinensis HOM05D003263 ORTHO05D004801 2.3e-25 119.4 136 54.4
MCO08G340 Micromonas commoda HOM05D003263 ORTHO05D004801 1.5e-24 116.7 87 64.4
PRCOL_00000346 Prasinoderma coloniale HOM05D003263 ORTHO05D004801 8.3e-23 110.9 69 72.5
GSVIVG01030914001 Vitis vinifera HOM05D003263 ORTHO05D004801 1.2e-21 107.1 52 94.2
Cc07_g13220 Coffea canephora HOM05D003263 ORTHO05D004801 1.6e-21 106.7 52 92.3
Gohir.A07G170100 Gossypium hirsutum HOM05D003263 ORTHO05D004801 1.6e-21 106.7 52 92.3
Gohir.D07G176300 Gossypium hirsutum HOM05D003263 ORTHO05D004801 1.6e-21 106.7 52 92.3
arahy.Tifrunner.gnm1.ann1.5H82NF Arachis hypogaea HOM05D003263 ORTHO05D004801 2.3e-20 102.8 52 90.4
arahy.Tifrunner.gnm1.ann1.RIP12T Arachis hypogaea HOM05D003263 ORTHO05D004801 2.3e-20 102.8 52 90.4
arahy.Tifrunner.gnm1.ann1.SN393R Arachis hypogaea HOM05D003263 ORTHO05D004801 2.3e-20 102.8 52 90.4
arahy.Tifrunner.gnm1.ann1.VKQW11 Arachis hypogaea HOM05D003263 ORTHO05D004801 2.3e-20 102.8 52 90.4
Haze_26802 Corylus avellana HOM05D003263 ORTHO05D004801 3.0e-20 102.4 66 66.7
MD16G1264400 Malus domestica HOM05D003263 ORTHO05D004801 2.8e-18 95.9 47 87.2
Cfa025667 Carpinus fangiana HOM05D003263 ORTHO05D004801 2.0e-16 89.7 58 67.2
QL08p053439 Quercus lobata HOM05D003263 ORTHO05D004801 3.7e-15 85.5 50 74.0
SEGI_05320 Sequoiadendron giganteum HOM05D003263 ORTHO05D004801 9.2e-14 80.9 62 64.5
CBR_g26339 Chara braunii HOM05D004987 ORTHO05D005960 7.6e-08 61.2 52 46.2
SEGI_04560 Sequoiadendron giganteum HOM05D003263 ORTHO05D004801 7.6e-08 61.2 119 41.2
Lsat_1_v5_gn_1_78040 Lactuca sativa HOM05D006674 ORTHO05D007954 2.2e-07 59.7 139 36.0


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