Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr17g0559021 Helianthus annuus HOM05D006728 ORTHO05D007911 0.0e+00 1397.1 725 100.0
ECA232G4554 Erigeron canadensis HOM05D006728 ORTHO05D007911 3.9e-198 695.7 749 53.5
Lsat_1_v5_gn_4_133160 Lactuca sativa HOM05D006728 ORTHO05D007911 1.1e-197 694.1 741 56.0
Dinv41739 Davidia involucrata HOM05D006728 ORTHO05D007911 1.3e-129 468.0 773 40.2
CiPaw.03G020000 Carya illinoinensis HOM05D006728 ORTHO05D007911 5.7e-117 426.0 766 37.7
Hma1.2p1_0705F.1_g206940 Hydrangea macrophylla HOM05D006728 ORTHO05D007911 1.2e-109 401.7 791 37.5
CSS0015483 Camellia sinensis var. sinensis HOM05D006728 ORTHO05D007911 1.3e-108 398.3 716 38.4
Actinidia23017 Actinidia chinensis HOM05D006728 ORTHO05D007911 4.0e-102 376.7 774 35.3
Haze_13898 Corylus avellana HOM05D006728 ORTHO05D007911 2.0e-101 374.4 752 36.4
TAR381G1619 Trochodendron aralioides HOM05D006728 ORTHO05D007911 2.0e-101 374.4 773 34.7
QL09p005234 Quercus lobata HOM05D006728 ORTHO05D007911 7.5e-101 372.5 752 35.4
COL.COLO4_24796 Corchorus olitorius HOM05D006728 ORTHO05D007911 6.0e-98 362.8 752 34.6
Manes.01G125500 Manihot esculenta HOM05D006728 ORTHO05D007911 3.9e-97 360.1 753 34.4
Gorai.009G264600 Gossypium raimondii HOM05D006728 ORTHO05D007911 6.6e-97 359.4 765 34.5
Gohir.D05G252600 Gossypium hirsutum HOM05D006728 ORTHO05D007911 8.6e-97 359.0 765 34.9
Atru.chr13.2383 Acer truncatum HOM05D006728 ORTHO05D007911 4.7e-95 353.2 719 36.2
MD15G1410500 Malus domestica HOM05D006728 ORTHO05D007911 8.0e-95 352.4 768 35.7
Rhsim10G0109300 Rhododendron simsii HOM05D006728 ORTHO05D007911 4.0e-94 350.1 652 37.6
Sopen11g011050 Solanum pennellii HOM05D006728 ORTHO05D007911 8.9e-94 349.0 745 34.0
vmacro12473 Vaccinium macrocarpon HOM05D006728 ORTHO05D007911 2.0e-93 347.8 801 34.3
Potri.004G133900 Populus trichocarpa HOM05D006728 ORTHO05D007911 4.4e-93 346.7 748 34.4
GSVIVG01012775001 Vitis vinifera HOM05D006728 ORTHO05D007911 5.8e-93 346.3 705 34.9
ClCG08G000330 Citrullus lanatus HOM05D006728 ORTHO05D007911 7.5e-93 345.9 738 34.6
MSTRG.1553 Avicennia marina HOM05D006728 ORTHO05D007911 2.9e-92 344.0 754 34.9
Gohir.A05G251200 Gossypium hirsutum HOM05D006728 ORTHO05D007911 1.9e-91 341.3 712 35.0
PGSC0003DMG400009266 Solanum tuberosum HOM05D006728 ORTHO05D007911 1.9e-91 341.3 749 34.0
RcHm_v2.0_Chr7g0228481 Rosa chinensis HOM05D006728 ORTHO05D007911 4.1e-91 340.1 765 35.7
MELO3C022215.2 Cucumis melo HOM05D006728 ORTHO05D007911 1.2e-90 338.6 728 35.0
Cc10_g10290 Coffea canephora HOM05D006728 ORTHO05D007911 6.6e-89 332.8 775 33.2
CAN.G102.5 Capsicum annuum HOM05D006728 ORTHO05D007911 2.5e-88 330.9 746 33.0
Peaxi162Scf00391g00619 Petunia axillaris HOM05D006728 ORTHO05D007911 9.5e-88 328.9 730 34.1
CsaV3_5G040430 Cucumis sativus L. HOM05D006728 ORTHO05D007911 2.3e-86 324.3 721 34.3
Migut.C01293 Erythranthe guttata HOM05D006728 ORTHO05D007911 2.0e-85 321.2 751 33.3
Nitab4.5_0000365g0060 Nicotiana tabacum HOM05D006728 ORTHO05D007911 7.5e-85 319.3 751 33.7
Sabra04G0084300 Salix brachista HOM05D006728 ORTHO05D007911 9.9e-85 318.9 747 32.0
TWI23G0528 Tripterygium wilfordii HOM05D006728 ORTHO05D007911 2.4e-83 314.3 735 33.1
DCAR_011523 Daucus carota HOM05D006728 ORTHO05D007911 5.4e-83 313.2 779 31.1
Oeu051790.1 Olea europaea HOM05D006728 ORTHO05D007911 7.1e-83 312.8 722 33.4
Sed0021340 Sechium edule HOM05D006728 ORTHO05D007911 1.2e-82 312.0 735 33.7
TWI59G0071 Tripterygium wilfordii HOM05D006728 ORTHO05D007911 1.2e-82 312.0 724 32.5
FAN08G1230 Fragaria x ananassa HOM05D006728 ORTHO05D007911 2.1e-82 311.2 762 33.2
FAN13G2633 Fragaria x ananassa HOM05D006728 ORTHO05D007911 2.3e-81 307.8 762 32.9
FAN04G0014 Fragaria x ananassa HOM05D006728 ORTHO05D007911 1.9e-80 304.7 780 33.2
FvH4_5g32290 Fragaria vesca HOM05D006728 ORTHO05D007911 1.6e-79 301.6 760 33.2
SalBow7G3045 Salvia bowleyana HOM05D006728 ORTHO05D007911 2.8e-79 300.8 732 33.3
FAN18G3195 Fragaria x ananassa HOM05D006728 ORTHO05D007911 3.6e-79 300.4 760 33.4
unitig_749.g13882 Utricularia gibba HOM05D006728 ORTHO05D007911 3.6e-79 300.4 715 34.0
SGA_v2.0_scaffold144G35834 Striga asiatica HOM05D005033 ORTHO05D007005 6.2e-79 299.7 733 30.6
Ciclev10004396m.g Citrus clementina HOM05D006728 ORTHO05D007911 5.2e-78 296.6 761 31.4
PGR044G1487 Punica granatum HOM05D006728 ORTHO05D007911 2.0e-77 294.7 758 32.2
Prupe.1G552000 Prunus persica HOM05D006728 ORTHO05D007911 9.9e-77 292.4 544 37.3
Nn1g02058 Nelumbo nucifera HOM05D006728 ORTHO05D007911 1.3e-76 292.0 780 29.9
THA.LOC104799928 Tarenaya hassleriana HOM05D006728 ORTHO05D007911 8.4e-76 289.3 765 31.8
Eucgr.J01411 Eucalyptus grandis HOM05D006728 ORTHO05D007911 9.2e-75 285.8 654 33.6
Migut.J01202 Erythranthe guttata HOM05D006728 ORTHO05D007911 2.3e-73 281.2 635 34.0
Nitab4.5_0004437g0010 Nicotiana tabacum HOM05D006728 ORTHO05D007911 5.6e-72 276.6 647 33.4
Cpa.g.c30412.3 Carica papaya HOM05D006728 ORTHO05D007911 2.0e-69 268.1 471 37.2
Thecc.03G072600 Theobroma cacao HOM05D006728 ORTHO05D007911 2.6e-69 267.7 459 39.7
Lalb_Chr21g0312581 Lupinus albus HOM05D006728 ORTHO05D007911 2.2e-68 264.6 618 33.7
Glyma.02G174700 Glycine max HOM05D006728 ORTHO05D007911 2.4e-67 261.2 675 31.4
Psat6g140120 Pisum sativum HOM05D006728 ORTHO05D007911 9.3e-67 259.2 663 31.5
Phvul.L001685 Phaseolus vulgaris HOM05D006728 ORTHO05D007911 1.0e-65 255.8 638 32.0
VMungo0720G2132 Vigna mungo HOM05D006728 ORTHO05D007911 3.6e-63 247.3 641 31.8
Aa31LG5G9990 Aethionema arabicum HOM05D006728 ORTHO05D007911 6.9e-62 243.0 793 28.6
CARHR235190 Cardamine hirsuta HOM05D006728 ORTHO05D007911 1.2e-61 242.3 742 29.6
Medtr1g072850 Medicago truncatula HOM05D006728 ORTHO05D007911 1.2e-61 242.3 672 30.8
Solyc11g020910.3 Solanum lycopersicum HOM05D006728 ORTHO05D007911 1.5e-61 241.9 498 34.1
Thhalv10024534m.g Eutrema salsugineum HOM05D006728 ORTHO05D007911 1.7e-60 238.4 738 29.4
Ca_09788_v3 Cicer arietinum L. HOM05D006728 ORTHO05D007911 4.9e-60 236.9 677 30.7
Sp7g25450 Schrenkiella parvula HOM05D006728 ORTHO05D007911 4.9e-60 236.9 738 30.2
Lj5g0018420 Lotus japonicus HOM05D006728 ORTHO05D007911 6.4e-60 236.5 653 32.8
AT4G27510 Arabidopsis thaliana HOM05D006728 ORTHO05D007911 6.0e-58 229.9 766 29.1
Hund02381 Selenicereus undatus HOM05D006728 ORTHO05D007911 6.0e-58 229.9 737 30.0
BraA01t01819Z Brassica rapa HOM05D006728 ORTHO05D007911 1.9e-56 224.9 722 29.8
TPR.G18562 Trifolium pratense HOM05D006728 ORTHO05D007911 5.6e-56 223.4 628 29.9
BolC1t02321H Brassica oleracea HOM05D006728 ORTHO05D007911 9.6e-56 222.6 726 29.9
A01p18730 Brassica napus HOM05D006728 ORTHO05D007911 1.3e-55 222.2 718 29.5
C01p23690 Brassica napus HOM05D006728 ORTHO05D007911 1.3e-55 222.2 726 29.9
ATR0487G015 Amborella trichopoda HOM05D006728 ORTHO05D007911 2.1e-55 221.5 744 28.1
Carub.0007s1334 Capsella rubella HOM05D006728 ORTHO05D007911 6.2e-55 219.9 753 28.4
Aqoxy7G02767 Aquilegia oxysepala HOM05D006728 ORTHO05D007911 1.1e-54 219.2 725 28.7
Glyma.10G191500 Glycine max HOM05D006728 ORTHO05D007911 1.8e-54 218.4 554 31.8
AUR62037055 Chenopodium quinoa HOM05D006728 ORTHO05D007911 2.4e-54 218.0 713 29.7
Sc24g0002590 Simmondsia chinensis HOM05D006728 ORTHO05D007911 5.3e-54 216.9 713 29.3
EL10Ac7g16629 Beta vulgaris HOM05D006728 ORTHO05D007911 5.5e-51 206.8 698 26.9
SHI29298 Sapria himalayana HOM05D006728 ORTHO05D007911 1.6e-50 205.3 531 31.3
arahy.Tifrunner.gnm1.ann1.2Y318K Arachis hypogaea HOM05D006728 ORTHO05D007911 1.0e-49 202.6 676 28.8
PSO144G0035 Papaver somniferum HOM05D006728 ORTHO05D007911 5.7e-48 196.8 729 27.3
AUR62036525 Chenopodium quinoa HOM05D006728 ORTHO05D007911 7.6e-45 186.4 542 29.5
PSO325G0011 Papaver somniferum HOM05D006728 ORTHO05D007911 2.5e-43 181.4 706 27.6
BcaNung07241 Brassica carinata HOM05D006728 ORTHO05D007911 4.2e-43 180.6 719 28.1
PSO325G0006 Papaver somniferum HOM05D006728 ORTHO05D007911 1.1e-40 172.6 548 28.8
arahy.Tifrunner.gnm1.ann1.PFS1J6 Arachis hypogaea HOM05D006728 ORTHO05D007911 2.5e-40 171.4 494 28.7
arahy.Tifrunner.gnm1.ann1.SM6YYV Arachis hypogaea HOM05D006728 ORTHO05D007911 1.3e-39 169.1 495 28.9
arahy.Tifrunner.gnm1.ann1.HTR7VF Arachis hypogaea HOM05D006728 ORTHO05D007911 4.1e-38 164.1 495 28.7
Atru.chr1.2802 Acer truncatum HOM05D006728 ORTHO05D007911 1.0e-36 159.5 348 31.6
PSO170G3307 Papaver somniferum HOM05D006728 ORTHO05D007911 3.4e-29 134.4 720 25.0
PSO170G3890 Papaver somniferum HOM05D006728 ORTHO05D007911 5.1e-25 120.6 362 28.2
Nn3g16574 Nelumbo nucifera HOM05D006728 ORTHO05D007911 8.2e-23 113.2 751 22.6
arahy.Tifrunner.gnm1.ann1.G54CSB Arachis hypogaea HOM05D006728 ORTHO05D007911 3.6e-18 97.8 281 29.9
Cpa.g.c34985.1 Carica papaya HOM05D006728 ORTHO05D007911 9.7e-16 89.7 264 28.8
HPP92_000129 Vanilla planifolia HOM05D006728 ORTHO05D007911 2.0e-13 82.0 624 21.8
TPR.G18439 Trifolium pratense HOM05D006728 ORTHO05D007911 2.6e-13 81.6 128 35.9
Atru.chr1.2803 Acer truncatum HOM05D006728 ORTHO05D007911 4.5e-13 80.9 126 41.3
Os02g0461200 Oryza sativa ssp. japonica HOM05D006728 ORTHO05D007911 7.7e-13 80.1 545 22.8
Zm00001eb295040 Zea mays HOM05D006728 ORTHO05D007911 3.8e-12 77.8 539 22.4
Glyma.20G198732 Glycine max HOM05D006728 ORTHO05D007911 8.3e-07 60.1 157 28.7


User provided reference genes

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