Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr17g0557951 Helianthus annuus HOM05D006699 ORTHO05D008399 1.2e-186 656.4 330 100.0
Lsat_1_v5_gn_8_140640 Lactuca sativa HOM05D006699 ORTHO05D008399 9.8e-149 530.4 340 79.1
ECA233G1148 Erigeron canadensis HOM05D000006 ORTHO05D000001 1.5e-144 516.5 333 79.9
Dinv15443 Davidia involucrata HOM05D006699 ORTHO05D008399 4.4e-133 478.4 341 71.0
CSS0012388 Camellia sinensis var. sinensis HOM05D006699 ORTHO05D008399 3.5e-130 468.8 340 69.4
CANSAT64G2599 Cannabis sativa HOM05D006699 ORTHO05D008399 3.0e-129 465.7 328 72.0
TAR626G0153 Trochodendron aralioides HOM05D006699 ORTHO05D008399 4.3e-128 461.8 366 65.6
Ciclev10015418m.g Citrus clementina HOM05D006699 ORTHO05D008399 2.8e-127 459.1 335 68.7
Thecc.01G150500 Theobroma cacao HOM05D006699 ORTHO05D008399 2.8e-127 459.1 340 68.8
C04p60180 Brassica napus HOM05D006699 ORTHO05D008399 4.7e-127 458.4 328 71.6
BolC4t27520H Brassica oleracea HOM05D006699 ORTHO05D008399 4.7e-127 458.4 328 71.6
Lj1A681T38 Lonicera japonica HOM05D006699 ORTHO05D008399 4.7e-127 458.4 337 68.2
BraA04t17899Z Brassica rapa HOM05D006699 ORTHO05D008399 1.8e-126 456.4 328 71.0
GSVIVG01020707001 Vitis vinifera HOM05D006699 ORTHO05D008399 1.8e-126 456.4 333 68.8
A04p23730 Brassica napus HOM05D006699 ORTHO05D008399 2.4e-126 456.1 328 70.7
Carub.0004s1225 Capsella rubella HOM05D006699 ORTHO05D008399 2.4e-126 456.1 331 71.0
AL4G26070 Arabidopsis lyrata HOM05D006699 ORTHO05D008399 3.1e-126 455.7 331 70.4
AL4G26150 Arabidopsis lyrata HOM05D006699 ORTHO05D008399 4.0e-126 455.3 331 70.4
QL08p041638 Quercus lobata HOM05D006699 ORTHO05D008399 4.0e-126 455.3 333 68.2
AT2G31040 Arabidopsis thaliana HOM05D006699 ORTHO05D008399 5.2e-126 454.9 331 70.4
Cfa023335 Carpinus fangiana HOM05D006699 ORTHO05D008399 5.2e-126 454.9 332 69.9
Sp4g13510 Schrenkiella parvula HOM05D006699 ORTHO05D008399 6.8e-126 454.5 334 70.1
CiPaw.04G132200 Carya illinoinensis HOM05D006699 ORTHO05D008399 8.9e-126 454.1 339 68.1
COL.COLO4_33580 Corchorus olitorius HOM05D006699 ORTHO05D008399 1.5e-125 453.4 345 66.7
QL08p041677 Quercus lobata HOM05D006699 ORTHO05D008399 3.4e-125 452.2 333 67.9
Thhalv10016897m.g Eutrema salsugineum HOM05D006699 ORTHO05D008399 1.7e-124 449.9 332 69.0
PGSC0003DMG400007857 Solanum tuberosum HOM05D006699 ORTHO05D008399 2.9e-124 449.1 334 68.0
Haze_13371 Corylus avellana HOM05D006699 ORTHO05D008399 1.1e-123 447.2 334 68.6
Eucgr.A01914 Eucalyptus grandis HOM05D006699 ORTHO05D008399 1.4e-123 446.8 332 67.5
Gohir.A12G086400 Gossypium hirsutum HOM05D006699 ORTHO05D008399 9.2e-123 444.1 338 66.6
Rhsim06G0131200 Rhododendron simsii HOM05D006699 ORTHO05D008399 1.2e-122 443.7 302 71.5
ClCG02G017820 Citrullus lanatus HOM05D006699 ORTHO05D008399 1.6e-122 443.4 338 65.7
Potri.014G142200 Populus trichocarpa HOM05D006699 ORTHO05D008399 1.6e-122 443.4 334 67.7
CARHR124570 Cardamine hirsuta HOM05D006699 ORTHO05D008399 2.7e-122 442.6 335 66.9
AUR62039018 Chenopodium quinoa HOM05D006699 ORTHO05D008399 2.7e-122 442.6 345 65.5
Gorai.008G095400 Gossypium raimondii HOM05D006699 ORTHO05D008399 2.7e-122 442.6 331 67.7
TWI59G0496 Tripterygium wilfordii HOM05D006699 ORTHO05D008399 3.5e-122 442.2 331 67.1
Migut.M00261 Erythranthe guttata HOM05D006699 ORTHO05D008399 1.7e-121 439.9 342 68.1
CsaV3_6G018450 Cucumis sativus L. HOM05D006699 ORTHO05D008399 2.3e-121 439.5 332 65.7
Gohir.D12G085000 Gossypium hirsutum HOM05D006699 ORTHO05D008399 3.0e-121 439.1 337 66.2
MD09G1238000 Malus domestica HOM05D006699 ORTHO05D008399 3.0e-121 439.1 337 67.1
Peaxi162Scf00384g00423 Petunia axillaris HOM05D006699 ORTHO05D008399 6.6e-121 438.0 325 69.2
Prupe.3G118500 Prunus persica HOM05D006699 ORTHO05D008399 1.1e-120 437.2 332 68.4
EL10Ac2g03349 Beta vulgaris HOM05D006699 ORTHO05D008399 1.9e-120 436.4 331 68.0
MD17G1230900 Malus domestica HOM05D006699 ORTHO05D008399 1.9e-120 436.4 337 67.1
PGR042G0843 Punica granatum HOM05D006699 ORTHO05D008399 2.5e-120 436.0 332 67.2
Psat7g165360 Pisum sativum HOM05D006699 ORTHO05D008399 2.1e-119 433.0 330 65.8
Lalb_Chr01g0006001 Lupinus albus HOM05D006699 ORTHO05D008399 2.8e-119 432.6 330 67.0
MSTRG.15092 Avicennia marina HOM05D006699 ORTHO05D008399 6.2e-119 431.4 349 63.6
CDE10G1046 Ceratophyllum demersum HOM05D006699 ORTHO05D008399 6.2e-119 431.4 339 65.2
arahy.Tifrunner.gnm1.ann1.GAG0UF Arachis hypogaea HOM05D006699 ORTHO05D008399 1.4e-118 430.3 330 67.6
arahy.Tifrunner.gnm1.ann1.0K2T49 Arachis hypogaea HOM05D006699 ORTHO05D008399 1.8e-118 429.9 330 67.3
FvH4_6g27380 Fragaria vesca HOM05D006699 ORTHO05D008399 3.1e-118 429.1 340 66.8
SGA_v2.0_scaffold9G04816 Striga asiatica HOM05D006699 ORTHO05D008399 5.3e-118 428.3 344 64.0
RcHm_v2.0_Chr2g0129651 Rosa chinensis HOM05D006699 ORTHO05D008399 9.9e-117 424.1 337 65.6
Nitab4.5_0001095g0100 Nicotiana tabacum HOM05D006699 ORTHO05D008399 1.3e-116 423.7 338 65.7
Medtr4g079850 Medicago truncatula HOM05D006699 ORTHO05D008399 1.7e-116 423.3 330 65.5
CAN.G1049.6 Capsicum annuum HOM05D006699 ORTHO05D008399 2.2e-116 422.9 338 63.9
Ca_18111_v3 Cicer arietinum L. HOM05D006699 ORTHO05D008399 3.8e-116 422.2 336 64.3
Actinidia11153 Actinidia chinensis HOM05D006699 ORTHO05D008399 1.9e-115 419.9 337 65.6
unitig_0.g2026 Utricularia gibba HOM05D006699 ORTHO05D008399 1.9e-115 419.9 350 63.1
Phvul.011G130500 Phaseolus vulgaris HOM05D006699 ORTHO05D008399 5.4e-115 418.3 327 63.9
VMungo1127G1340 Vigna mungo HOM05D006699 ORTHO05D008399 1.2e-114 417.2 327 64.8
Sabra14G0107300 Salix brachista HOM05D006699 ORTHO05D008399 2.1e-114 416.4 323 67.8
Glyma.06G277600 Glycine max HOM05D006699 ORTHO05D008399 2.7e-114 416.0 327 64.2
PSO675G3944 Papaver somniferum HOM05D006699 ORTHO05D008399 3.5e-114 415.6 343 61.2
PSO229G0039 Papaver somniferum HOM05D006699 ORTHO05D008399 6.0e-114 414.8 338 61.8
Lj3g0015335 Lotus japonicus HOM05D006699 ORTHO05D008399 1.3e-113 413.7 331 62.8
FAN14G2123 Fragaria x ananassa HOM05D006699 ORTHO05D008399 1.7e-113 413.3 352 64.2
PGSC0003DMG400020443 Solanum tuberosum HOM05D006699 ORTHO05D008399 6.6e-113 411.4 338 63.6
Hund07812 Selenicereus undatus HOM05D006699 ORTHO05D008399 1.5e-112 410.2 345 62.3
Sopen12g006230 Solanum pennellii HOM05D006699 ORTHO05D008399 5.6e-112 408.3 293 70.6
Solyc12g010870.3 Solanum lycopersicum HOM05D006699 ORTHO05D008399 9.6e-112 407.5 297 70.0
DCAR_017060 Daucus carota HOM05D006699 ORTHO05D008399 2.8e-111 406.0 320 64.7
FAN09G4348 Fragaria x ananassa HOM05D006699 ORTHO05D008399 3.6e-111 405.6 371 61.2
Manes.02G091200 Manihot esculenta HOM05D006699 ORTHO05D008399 8.1e-111 404.4 339 63.1
Nitab4.5_0000537g0130 Nicotiana tabacum HOM05D006699 ORTHO05D008399 6.9e-110 401.4 337 62.9
Solyc07g055050.3 Solanum lycopersicum HOM05D006699 ORTHO05D008399 1.2e-109 400.6 331 62.5
Sopen07g027160 Solanum pennellii HOM05D006699 ORTHO05D008399 1.5e-109 400.2 331 63.1
ATR0602G053 Amborella trichopoda HOM05D006699 ORTHO05D008399 3.4e-109 399.1 317 63.7
Nitab4.5_0011277g0010 Nicotiana tabacum HOM05D006699 ORTHO05D008399 4.5e-101 372.1 342 58.8
Nitab4.5_0009754g0010 Nicotiana tabacum HOM05D006699 ORTHO05D008399 7.6e-101 371.3 337 60.5
Os01g0673800 Oryza sativa ssp. japonica HOM05D006699 ORTHO05D008399 1.0e-100 370.9 322 59.9
Aa31LG1G7380 Aethionema arabicum HOM05D006699 ORTHO05D008399 8.4e-100 367.9 337 58.8
FAN02G3357 Fragaria x ananassa HOM05D006699 ORTHO05D008399 9.3e-99 364.4 305 63.9
Sc06g0009080 Simmondsia chinensis HOM05D006699 ORTHO05D008399 1.9e-96 356.7 263 67.7
Manes.01G133200 Manihot esculenta HOM05D006699 ORTHO05D008399 1.3e-95 354.0 270 68.5
Lju1655A0G36 Lonicera japonica HOM05D006699 ORTHO05D008399 4.8e-95 352.1 401 50.6
Sed0000889 Sechium edule HOM05D006699 ORTHO05D008399 2.0e-93 346.7 267 65.2
Peaxi162Scf00469g00217 Petunia axillaris HOM05D006699 ORTHO05D008399 3.4e-93 345.9 325 58.2
Sed0016519 Sechium edule HOM05D006699 ORTHO05D008399 2.7e-90 336.3 336 55.7
Aqoxy1G02064 Aquilegia oxysepala HOM05D006699 ORTHO05D008399 1.8e-89 333.6 261 65.5
MELO3C013567.2 Cucumis melo HOM05D006699 ORTHO05D008399 2.0e-85 320.1 234 69.2
Oeu018752.1 Olea europaea HOM05D006699 ORTHO05D008399 7.7e-85 318.2 232 68.5
AUR62037610 Chenopodium quinoa HOM05D006426 ORTHO05D008399 1.4e-83 313.9 230 68.7
Eucgr.K01127 Eucalyptus grandis HOM05D006699 ORTHO05D008399 2.1e-82 310.1 321 55.1
HPP92_009665 Vanilla planifolia HOM05D006699 ORTHO05D008399 7.9e-82 308.1 391 46.8
Cc05_g08340 Coffea canephora HOM05D006699 ORTHO05D008399 5.1e-81 305.4 243 63.8
TPR.G28306 Trifolium pratense HOM05D006699 ORTHO05D008399 6.3e-79 298.5 271 58.3
vmacro12376 Vaccinium macrocarpon HOM05D006699 ORTHO05D008399 2.9e-76 289.7 333 49.2
Mapoly0038s0046 Marchantia polymorpha HOM05D006699 ORTHO05D008399 4.2e-75 285.8 296 51.7
Pp3c8_13580 Physcomitrium patens HOM05D006699 ORTHO05D008399 6.7e-73 278.5 317 48.9
Ah.01g003530 Amaranthus hybridus HOM05D006426 ORTHO05D007737 2.0e-69 266.9 179 72.6
AagrBONN_evm.TU.Sc2ySwM_228.3020 Anthoceros agrestis HOM05D006699 ORTHO05D008399 3.7e-63 246.1 268 48.5
SEGI_23271 Sequoiadendron giganteum HOM05D006699 ORTHO05D008399 1.3e-60 237.7 263 47.5
Atru.chr6.2796 Acer truncatum HOM05D006699 ORTHO05D008399 1.2e-58 231.1 184 65.8
Cpa.g.sc52.174 Carica papaya HOM05D006699 ORTHO05D008399 1.2e-56 224.6 179 63.1
SMO014G0045 Selaginella moellendorffii HOM05D006699 ORTHO05D008399 2.8e-55 219.9 325 40.3
Zm00001eb360100 Zea mays HOM05D006699 ORTHO05D008399 8.5e-52 208.4 225 54.2
Cc05_g08350 Coffea canephora HOM05D006699 ORTHO05D008399 1.5e-35 154.5 98 76.5
Atru.chr6.2795 Acer truncatum HOM05D006699 ORTHO05D008399 2.0e-29 134.0 75 84.0
vmacro12375 Vaccinium macrocarpon HOM05D006699 ORTHO05D008399 2.7e-29 133.7 94 67.0
Ah.01g003520 Amaranthus hybridus HOM05D006699 ORTHO05D008399 3.3e-27 126.7 94 59.6
Cre01.g049600 Chlamydomonas reinhardtii HOM05D006699 ORTHO05D008399 6.4e-23 112.5 294 30.3
BraA03t11005Z Brassica rapa HOM05D006699 ORTHO05D008399 8.3e-23 112.1 89 64.0
A03p17330 Brassica napus HOM05D006699 ORTHO05D008399 2.1e-21 107.5 89 61.8
Lsat_1_v5_gn_2_38761 Lactuca sativa HOM05D006699 ORTHO05D008399 3.3e-19 100.1 78 66.7
CDE10G0215 Ceratophyllum demersum HOM05D006699 ORTHO05D008399 3.6e-18 96.7 59 78.0
PRCOL_00001453 Prasinoderma coloniale HOM05D006699 ORTHO05D008399 1.1e-17 95.1 220 35.9
MCO04G044 Micromonas commoda HOM05D006699 ORTHO05D008399 3.5e-13 80.1 192 32.3
C03p20440 Brassica napus HOM05D006699 ORTHO05D042655 1.9e-11 74.3 54 66.7
BolC3t14422H Brassica oleracea HOM05D006699 ORTHO05D042655 1.9e-11 74.3 54 66.7
TPR.G33085 Trifolium pratense HOM05D006699 ORTHO05D008399 1.2e-08 65.1 40 77.5
SMO338G0026 Selaginella moellendorffii HOM05D005386 ORTHO05D006981 3.2e-06 57.0 171 29.8


User provided reference genes

Program Settings