Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr17g0556721 Helianthus annuus HOM05D004717 ORTHO05D005636 5.3e-87 324.3 164 100.0
HanXRQChr08g0237151 Helianthus annuus HOM05D004717 ORTHO05D005636 8.2e-72 273.9 155 91.6
ECA247G4036 Erigeron canadensis HOM05D004717 ORTHO05D005636 4.7e-67 258.1 166 80.7
Lsat_1_v5_gn_9_25720 Lactuca sativa HOM05D004717 ORTHO05D005636 2.3e-66 255.8 156 81.4
Dinv02673 Davidia involucrata HOM05D004717 ORTHO05D005636 2.1e-59 232.6 154 74.0
Cc11_g03470 Coffea canephora HOM05D004717 ORTHO05D005636 1.8e-58 229.6 155 70.3
Rhsim02G0075200 Rhododendron simsii HOM05D004717 ORTHO05D005636 2.3e-58 229.2 155 71.6
Solyc04g009010.2 Solanum lycopersicum HOM05D004717 ORTHO05D005636 5.2e-58 228.0 156 68.6
Lj6P708T54 Lonicera japonica HOM05D004717 ORTHO05D005636 8.8e-58 227.3 155 70.3
PGSC0003DMG400011510 Solanum tuberosum HOM05D004717 ORTHO05D005636 1.2e-57 226.9 156 69.2
Oeu003437.1 Olea europaea HOM05D004717 ORTHO05D005636 2.6e-57 225.7 155 70.3
Oeu033041.1 Olea europaea HOM05D004717 ORTHO05D005636 5.7e-57 224.6 155 69.0
vmacro15638 Vaccinium macrocarpon HOM05D004717 ORTHO05D005636 7.5e-57 224.2 161 67.1
DCAR_027608 Daucus carota HOM05D004717 ORTHO05D005636 9.8e-57 223.8 138 78.3
Duzib132G0983 Durio zibethinus HOM05D004717 ORTHO05D005636 9.8e-57 223.8 153 70.6
Nitab4.5_0004808g0010 Nicotiana tabacum HOM05D004717 ORTHO05D005636 1.3e-56 223.4 154 68.8
Nitab4.5_0004979g0110 Nicotiana tabacum HOM05D004717 ORTHO05D005636 1.3e-56 223.4 154 68.2
PGR142G4258 Punica granatum HOM05D004717 ORTHO05D005636 2.2e-56 222.6 154 66.9
MELO3C022525.2 Cucumis melo HOM05D004717 ORTHO05D005636 3.7e-56 221.9 155 69.0
CsaV3_6G005870 Cucumis sativus L. HOM05D004717 ORTHO05D005636 4.8e-56 221.5 155 68.4
Peaxi162Scf00681g00024 Petunia axillaris HOM05D004717 ORTHO05D005636 4.8e-56 221.5 154 68.2
Thecc.02G155400 Theobroma cacao HOM05D004717 ORTHO05D005636 6.3e-56 221.1 153 69.9
Eucgr.G02601 Eucalyptus grandis HOM05D004717 ORTHO05D005636 8.3e-56 220.7 155 65.8
Gohir.A12G132100 Gossypium hirsutum HOM05D004717 ORTHO05D005636 1.1e-55 220.3 155 68.4
PGR142G2311 Punica granatum HOM05D004717 ORTHO05D005636 1.1e-55 220.3 167 61.1
Migut.L01402 Erythranthe guttata HOM05D004717 ORTHO05D005636 1.8e-55 219.5 155 69.0
Glyma.16G218800 Glycine max HOM05D004717 ORTHO05D005636 1.8e-55 219.5 155 66.5
CiPaw.06G062200 Carya illinoinensis HOM05D004717 ORTHO05D005636 3.1e-55 218.8 155 64.5
TWI74G1267 Tripterygium wilfordii HOM05D004717 ORTHO05D005636 3.1e-55 218.8 161 65.2
CSS0046676 Camellia sinensis var. sinensis HOM05D004717 ORTHO05D005636 4.1e-55 218.4 156 67.9
Hma1.2p1_0513F.1_g169470 Hydrangea macrophylla HOM05D004717 ORTHO05D005636 4.1e-55 218.4 156 69.2
Manes.08G039100 Manihot esculenta HOM05D004717 ORTHO05D005636 5.4e-55 218.0 158 63.9
CiPaw.05G171400 Carya illinoinensis HOM05D004717 ORTHO05D005636 7.0e-55 217.6 155 66.5
Lj6P714T12 Lonicera japonica HOM05D004717 ORTHO05D005636 7.0e-55 217.6 137 75.2
CAN.G274.13 Capsicum annuum HOM05D004717 ORTHO05D005636 9.1e-55 217.2 161 64.6
MD16G1003900 Malus domestica HOM05D004717 ORTHO05D005636 9.1e-55 217.2 155 65.2
Prupe.1G348900 Prunus persica HOM05D004717 ORTHO05D005636 1.2e-54 216.9 155 64.5
arahy.Tifrunner.gnm1.ann1.8YZR55 Arachis hypogaea HOM05D004717 ORTHO05D005636 1.6e-54 216.5 156 67.3
arahy.Tifrunner.gnm1.ann1.TS1LPS Arachis hypogaea HOM05D004717 ORTHO05D005636 1.6e-54 216.5 156 67.3
MSTRG.7889 Avicennia marina HOM05D004717 ORTHO05D005636 3.5e-54 215.3 155 66.5
Gorai.008G146900 Gossypium raimondii HOM05D004717 ORTHO05D005636 3.5e-54 215.3 153 67.3
Lalb_Chr24g0398391 Lupinus albus HOM05D004717 ORTHO05D005636 3.5e-54 215.3 158 66.5
SGA_v2.0_scaffold62G21625 Striga asiatica HOM05D004717 ORTHO05D005636 3.5e-54 215.3 155 65.8
Eucgr.G02666 Eucalyptus grandis HOM05D004717 ORTHO05D005636 7.7e-54 214.2 155 65.2
Lsat_1_v5_gn_5_170960 Lactuca sativa HOM05D004717 ORTHO05D005636 7.7e-54 214.2 155 67.1
MD13G1003500 Malus domestica HOM05D004717 ORTHO05D005636 1.0e-53 213.8 172 62.2
Potri.005G089500 Populus trichocarpa HOM05D004717 ORTHO05D005636 1.0e-53 213.8 155 65.2
Sp6g34610 Schrenkiella parvula HOM05D004717 ORTHO05D005636 1.3e-53 213.4 155 67.1
GSVIVG01038782001 Vitis vinifera HOM05D004717 ORTHO05D005636 1.7e-53 213.0 170 61.8
Atru.chr11.1095 Acer truncatum HOM05D004717 ORTHO05D005636 2.3e-53 212.6 154 68.2
Sed0013821 Sechium edule HOM05D004717 ORTHO05D005636 2.3e-53 212.6 155 67.1
Lj5g0015714 Lotus japonicus HOM05D004717 ORTHO05D005636 3.8e-53 211.8 155 63.2
ClCG06G000120 Citrullus lanatus HOM05D004717 ORTHO05D005636 5.0e-53 211.5 149 67.1
AL6G18770 Arabidopsis lyrata HOM05D004717 ORTHO05D005636 6.5e-53 211.1 155 65.2
AUR62001133 Chenopodium quinoa HOM05D004717 ORTHO05D005636 6.5e-53 211.1 153 66.0
Phvul.004G144800 Phaseolus vulgaris HOM05D004717 ORTHO05D005636 6.5e-53 211.1 155 63.9
Sc08g0003750 Simmondsia chinensis HOM05D004717 ORTHO05D005636 6.5e-53 211.1 153 66.7
Ah.01g024100 Amaranthus hybridus HOM05D004717 ORTHO05D005636 8.6e-53 210.7 155 64.5
AL6G34580 Arabidopsis lyrata HOM05D004717 ORTHO05D005636 8.6e-53 210.7 155 66.5
Carub.0006s2109 Capsella rubella HOM05D004717 ORTHO05D005636 8.6e-53 210.7 154 63.6
VMungo0464G0417 Vigna mungo HOM05D004717 ORTHO05D005636 8.6e-53 210.7 155 61.3
QL04p036464 Quercus lobata HOM05D004717 ORTHO05D005636 1.1e-52 210.3 156 62.8
RcHm_v2.0_Chr4g0446911 Rosa chinensis HOM05D004717 ORTHO05D005636 1.1e-52 210.3 156 63.5
Sed0025396 Sechium edule HOM05D004717 ORTHO05D005636 2.5e-52 209.1 154 63.6
Carub.0006s0723 Capsella rubella HOM05D004717 ORTHO05D005636 3.3e-52 208.8 155 65.8
THA.LOC104800704 Tarenaya hassleriana HOM05D004717 ORTHO05D005636 3.3e-52 208.8 154 63.6
AT5G08335 Arabidopsis thaliana HOM05D004717 ORTHO05D005636 4.2e-52 208.4 155 65.2
Haze_11783 Corylus avellana HOM05D004717 ORTHO05D005636 5.5e-52 208.0 153 64.7
Gohir.D12G135700 Gossypium hirsutum HOM05D004717 ORTHO05D005636 5.5e-52 208.0 137 70.1
Ciclev10016775m.g Citrus clementina HOM05D004717 ORTHO05D005636 7.2e-52 207.6 156 64.1
TPR.G28016 Trifolium pratense HOM05D004717 ORTHO05D005636 7.2e-52 207.6 155 63.9
CARHR204740 Cardamine hirsuta HOM05D004717 ORTHO05D005636 9.5e-52 207.2 155 65.2
CiPaw.05G171500 Carya illinoinensis HOM05D004717 ORTHO05D005636 9.5e-52 207.2 155 64.5
AUR62012906 Chenopodium quinoa HOM05D004717 ORTHO05D005636 9.5e-52 207.2 155 67.1
CARHR190220 Cardamine hirsuta HOM05D004717 ORTHO05D005636 1.2e-51 206.8 155 63.2
Thhalv10014725m.g Eutrema salsugineum HOM05D004717 ORTHO05D005636 1.2e-51 206.8 155 64.5
GSVIVG01026135001 Vitis vinifera HOM05D004717 ORTHO05D005636 1.2e-51 206.8 155 63.9
Medtr6g075160 Medicago truncatula HOM05D004717 ORTHO05D005636 1.6e-51 206.5 155 64.5
Nn2g12497 Nelumbo nucifera HOM05D004717 ORTHO05D005636 1.6e-51 206.5 159 61.6
QL04p036080 Quercus lobata HOM05D004717 ORTHO05D005636 2.1e-51 206.1 164 59.1
EL10Ac9g21225 Beta vulgaris HOM05D004717 ORTHO05D005636 2.8e-51 205.7 155 65.2
CANSAT11G2572 Cannabis sativa HOM05D004717 ORTHO05D005636 2.8e-51 205.7 156 64.1
FAN12G1282 Fragaria x ananassa HOM05D004717 ORTHO05D005636 2.8e-51 205.7 156 62.2
Aa31LG3G18230 Aethionema arabicum HOM05D006471 ORTHO05D005636 3.6e-51 205.3 155 63.9
AT5G23320 Arabidopsis thaliana HOM05D004717 ORTHO05D005636 3.6e-51 205.3 154 65.6
Sabra07G0063200 Salix brachista HOM05D004717 ORTHO05D005636 3.6e-51 205.3 154 63.0
A03p03770 Brassica napus HOM05D004717 ORTHO05D005636 4.7e-51 204.9 155 65.8
Potri.007G074500 Populus trichocarpa HOM05D004717 ORTHO05D005636 4.7e-51 204.9 155 61.9
EL10Ac7g17906 Beta vulgaris HOM05D004717 ORTHO05D005636 6.1e-51 204.5 138 70.3
SGA_v2.0_scaffold8G04231 Striga asiatica HOM05D004717 ORTHO05D005636 6.1e-51 204.5 155 65.2
BraA03t09724Z Brassica rapa HOM05D004717 ORTHO05D005636 8.0e-51 204.1 155 65.2
Aqoxy6G00094 Aquilegia oxysepala HOM05D004717 ORTHO05D005636 1.0e-50 203.8 154 62.3
PSO170G2864 Papaver somniferum HOM05D004717 ORTHO05D005636 1.0e-50 203.8 152 65.8
C03p04250 Brassica napus HOM05D004717 ORTHO05D005636 2.3e-50 202.6 155 64.5
BolC3t12957H Brassica oleracea HOM05D004717 ORTHO05D005636 2.3e-50 202.6 155 64.5
Lj2g0014996 Lotus japonicus HOM05D004717 ORTHO05D005636 4.0e-50 201.8 155 60.0
PSO782G0831 Papaver somniferum HOM05D004717 ORTHO05D005636 4.0e-50 201.8 152 65.1
BcaB01g05612 Brassica carinata HOM05D004717 ORTHO05D005636 5.2e-50 201.4 155 64.5
HanXRQChr01g0011051 Helianthus annuus HOM05D004717 ORTHO05D005636 5.2e-50 201.4 155 66.5
Psat1g123480 Pisum sativum HOM05D004717 ORTHO05D005636 5.2e-50 201.4 156 62.8
Gohir.A11G227800 Gossypium hirsutum HOM05D004717 ORTHO05D005636 1.2e-49 200.3 137 66.4
Thecc.05G241200 Theobroma cacao HOM05D004717 ORTHO05D005636 1.2e-49 200.3 137 66.4
GSVIVG01038778001 Vitis vinifera HOM05D004717 ORTHO05D005636 1.5e-49 199.9 155 63.9
Gohir.D11G240300 Gossypium hirsutum HOM05D004717 ORTHO05D005636 2.6e-49 199.1 137 66.4
Gorai.007G253700 Gossypium raimondii HOM05D004717 ORTHO05D005636 2.6e-49 199.1 137 66.4
Lj3g0022258 Lotus japonicus HOM05D004717 ORTHO05D005636 2.6e-49 199.1 155 59.4
Lj3P847T27 Lonicera japonica HOM05D004717 ORTHO05D005636 7.5e-49 197.6 137 69.3
Ah.08g214600 Amaranthus hybridus HOM05D004717 ORTHO05D005636 9.8e-49 197.2 151 66.9
Migut.E00157 Erythranthe guttata HOM05D004717 ORTHO05D005636 1.7e-48 196.4 156 62.8
Lalb_Chr16g0386851 Lupinus albus HOM05D004717 ORTHO05D005636 1.7e-48 196.4 151 62.3
Zm00001eb144100 Zea mays HOM05D004717 ORTHO05D005636 2.2e-48 196.1 138 64.5
CDE02G0493 Ceratophyllum demersum HOM05D004717 ORTHO05D005636 2.8e-48 195.7 156 59.0
TPR.G9035 Trifolium pratense HOM05D004717 ORTHO05D005636 6.3e-48 194.5 155 61.3
SHI07248 Sapria himalayana HOM05D004717 ORTHO05D005636 8.3e-48 194.1 156 60.9
Sc17g0002110 Simmondsia chinensis HOM05D004717 ORTHO05D005636 1.1e-47 193.7 148 66.2
CDE04G3142 Ceratophyllum demersum HOM05D004717 ORTHO05D005636 1.4e-47 193.4 156 59.6
Duzib177G0848 Durio zibethinus HOM05D004717 ORTHO05D005636 1.6e-46 189.9 137 64.2
MBI14_g08135_MAGBIO Magnolia biondii HOM05D004717 ORTHO05D005636 7.8e-46 187.6 157 59.9
unitig_8.g3169 Utricularia gibba HOM05D004717 ORTHO05D005636 8.6e-45 184.1 155 60.0
Duzib106G0072 Durio zibethinus HOM05D004717 ORTHO05D005636 1.1e-44 183.7 137 62.0
HPP92_018371 Vanilla planifolia HOM05D004717 ORTHO05D005636 2.1e-43 179.5 135 62.2
Actinidia35903 Actinidia chinensis HOM05D004717 ORTHO05D005636 5.4e-39 164.9 137 58.4
DCAR_023472 Daucus carota HOM05D004717 ORTHO05D005636 5.4e-39 164.9 101 76.2
Aa31LG11G2780 Aethionema arabicum HOM05D004717 ORTHO05D005636 2.3e-37 159.5 102 69.6
Cpa.g.sc59.26 Carica papaya HOM05D004717 ORTHO05D005636 5.6e-36 154.8 163 49.7
AUR62011721 Chenopodium quinoa HOM05D004717 ORTHO05D005636 4.7e-35 151.8 101 68.3
Glyma.09G169200 Glycine max HOM05D004717 ORTHO05D005636 6.8e-34 147.9 155 49.7
TAR381G0283 Trochodendron aralioides HOM05D004717 ORTHO05D005636 8.9e-34 147.5 124 58.1
SMO117G0139 Selaginella moellendorffii HOM05D004717 ORTHO05D005636 1.2e-33 147.1 134 51.5
ATR0580G192 Amborella trichopoda HOM05D004717 ORTHO05D005636 2.9e-32 142.5 102 60.8
Pp3c3_35430 Physcomitrium patens HOM05D004717 ORTHO05D005636 1.1e-31 140.6 138 50.0
Rhsim02G0074800 Rhododendron simsii HOM05D004717 ORTHO05D005636 4.1e-31 138.7 165 49.1
SalBow2G2042 Salvia bowleyana HOM05D004717 ORTHO05D005636 7.8e-30 134.4 138 52.2
Mapoly0062s0094 Marchantia polymorpha HOM05D004717 ORTHO05D005636 5.0e-29 131.7 154 42.9
Sopen04g004190 Solanum pennellii HOM05D004717 ORTHO05D005636 2.3e-26 122.9 72 76.4
MCO05G386 Micromonas commoda HOM05D004717 ORTHO05D005636 2.2e-24 116.3 150 44.7
PRCOL_00002165 Prasinoderma coloniale HOM05D004717 ORTHO05D005636 1.5e-20 103.6 146 41.8
AagrBONN_evm.TU.Sc2ySwM_344.2327 Anthoceros agrestis HOM05D004717 ORTHO05D005636 2.1e-19 99.8 107 47.7
Haze_27496 Corylus avellana HOM05D004717 ORTHO05D005636 3.1e-18 95.9 148 35.1
AagrBONN_evm.TU.Sc2ySwM_117.4144 Anthoceros agrestis HOM05D004717 ORTHO05D005636 6.8e-18 94.7 107 46.7
COL.COLO4_20086 Corchorus olitorius HOM05D004717 ORTHO05D005636 8.9e-18 94.4 55 69.1
Eucgr.D01405 Eucalyptus grandis HOM05D004717 ORTHO05D005636 7.6e-17 91.3 64 60.9
Os04g0602900 Oryza sativa ssp. japonica HOM05D004717 ORTHO05D005636 2.2e-16 89.7 70 57.1
Hund05579 Selenicereus undatus HOM05D004717 ORTHO05D005636 7.8e-14 81.3 87 44.8
C07p44230 Brassica napus HOM05D006667 ORTHO05D008387 7.3e-12 74.7 90 50.0
Cfa021666 Carpinus fangiana HOM05D004717 ORTHO05D005636 3.1e-10 69.3 131 32.1
Ca_23673_v3 Cicer arietinum L. HOM05D004717 ORTHO05D005636 3.4e-09 65.9 51 58.8


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