Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr17g0556381 Helianthus annuus HOM05D005953 ORTHO05D004056 4.6e-32 140.6 69 100.0
Lsat_1_v5_gn_8_134201 Lactuca sativa HOM05D005953 ORTHO05D004056 1.6e-13 79.0 72 61.1
HanXRQChr17g0541941 Helianthus annuus HOM05D005953 ORTHO05D004056 7.6e-11 70.1 78 55.1
ECA246G2973 Erigeron canadensis HOM05D005953 ORTHO05D004056 1.3e-10 69.3 75 56.0
Lsat_1_v5_gn_3_37261 Lactuca sativa HOM05D005953 ORTHO05D004056 2.4e-09 65.1 76 52.6
Lsat_1_v5_gn_4_66421 Lactuca sativa HOM05D005953 ORTHO05D004056 3.5e-08 61.2 65 56.9
Hma1.2p1_1201F.1_g266560 Hydrangea macrophylla HOM05D005953 ORTHO05D004056 4.6e-08 60.8 75 48.0
MBI06_g06482_MAGBIO Magnolia biondii HOM05D005953 ORTHO05D004056 1.0e-07 59.7 79 48.1
Haze_09200 Corylus avellana HOM05D008304 ORTHO05D004056 1.8e-07 58.9 76 51.3
Sed0013976 Sechium edule HOM05D005953 ORTHO05D004056 1.8e-07 58.9 73 47.9
Potri.019G100601 Populus trichocarpa HOM05D005953 ORTHO05D004056 3.0e-07 58.2 69 47.8
Lalb_Chr14g0366901 Lupinus albus HOM05D005953 ORTHO05D004056 3.9e-07 57.8 72 51.4
Sabra13G0111400 Salix brachista HOM05D005953 ORTHO05D004056 3.9e-07 57.8 68 47.1
Medtr2g090340 Medicago truncatula HOM05D005953 ORTHO05D004056 5.1e-07 57.4 74 48.6
QL02p049480 Quercus lobata HOM05D005953 ORTHO05D004056 5.1e-07 57.4 75 49.3
QL08p038675 Quercus lobata HOM05D005953 ORTHO05D004056 5.1e-07 57.4 75 49.3
Cfa011898 Carpinus fangiana HOM05D008304 ORTHO05D004056 6.7e-07 57.0 76 50.0
MELO3C013618.2 Cucumis melo HOM05D005953 ORTHO05D004056 6.7e-07 57.0 75 45.3
Hund01100 Selenicereus undatus HOM05D005953 ORTHO05D004056 6.7e-07 57.0 72 50.0
Gohir.A12G241800 Gossypium hirsutum HOM05D008304 ORTHO05D004056 1.1e-06 56.2 76 47.4
HanXRQChr06g0171331 Helianthus annuus HOM05D005953 ORTHO05D004056 1.1e-06 56.2 77 48.1
Sabra16G0303400 Salix brachista HOM05D008304 ORTHO05D004056 1.9e-06 55.5 64 51.6
Atru.chr9.1863 Acer truncatum HOM05D008304 ORTHO05D004056 2.5e-06 55.1 65 53.8
arahy.Tifrunner.gnm1.ann1.RLZ54R Arachis hypogaea HOM05D005953 ORTHO05D004056 2.5e-06 55.1 71 46.5
arahy.Tifrunner.gnm1.ann1.XD6XV6 Arachis hypogaea HOM05D005953 ORTHO05D004056 2.5e-06 55.1 73 47.9
Gorai.008G260200 Gossypium raimondii HOM05D008304 ORTHO05D004056 2.5e-06 55.1 76 46.1
Oeu045817.1 Olea europaea HOM05D005953 ORTHO05D004056 2.5e-06 55.1 75 45.3
Potri.001G449633 Populus trichocarpa HOM05D008304 ORTHO05D004056 2.5e-06 55.1 69 47.8
Sp7g26250 Schrenkiella parvula HOM05D005953 ORTHO05D004056 2.5e-06 55.1 75 49.3
CiPaw.03G176600 Carya illinoinensis HOM05D005953 ORTHO05D004056 3.3e-06 54.7 71 47.9
Oeu002560.3 Olea europaea HOM05D005953 ORTHO05D004056 3.3e-06 54.7 78 47.4
Ca_01501_v3 Cicer arietinum L. HOM05D005953 ORTHO05D004056 4.3e-06 54.3 73 49.3
Ciclev10017361m.g Citrus clementina HOM05D005953 ORTHO05D004056 4.3e-06 54.3 82 47.6
FvH4_5g10570 Fragaria vesca HOM05D008304 ORTHO05D004056 4.3e-06 54.3 69 49.3
FAN04G0709 Fragaria x ananassa HOM05D008304 ORTHO05D012179 4.3e-06 54.3 69 49.3
FAN13G2184 Fragaria x ananassa HOM05D008304 ORTHO05D012179 4.3e-06 54.3 69 49.3
FAN18G4101 Fragaria x ananassa HOM05D008304 ORTHO05D012179 4.3e-06 54.3 69 49.3
Gohir.D04G143500 Gossypium hirsutum HOM05D005953 ORTHO05D004056 4.3e-06 54.3 71 46.5
Gorai.012G128900 Gossypium raimondii HOM05D005953 ORTHO05D004056 4.3e-06 54.3 71 46.5
Nn1g06570 Nelumbo nucifera HOM05D005953 ORTHO05D004056 4.3e-06 54.3 82 46.3
Prupe.5G132900 Prunus persica HOM05D008304 ORTHO05D004056 4.3e-06 54.3 70 51.4
arahy.Tifrunner.gnm1.ann1.4Y3SQC Arachis hypogaea HOM05D005953 ORTHO05D004056 5.6e-06 53.9 69 47.8
CANSAT21G0162 Cannabis sativa HOM05D008304 ORTHO05D004056 5.6e-06 53.9 76 50.0
Lj3g0009023 Lotus japonicus HOM05D005953 ORTHO05D004056 5.6e-06 53.9 70 50.0
Lalb_Chr03g0029431 Lupinus albus HOM05D005953 ORTHO05D004056 5.6e-06 53.9 74 48.6
MD06G1122200 Malus domestica HOM05D008304 ORTHO05D004056 5.6e-06 53.9 69 46.4
Phvul.011G114200 Phaseolus vulgaris HOM05D005953 ORTHO05D004056 5.6e-06 53.9 72 48.6
Sed0018210 Sechium edule HOM05D008304 ORTHO05D004056 5.6e-06 53.9 73 50.7
Thecc.03G217700 Theobroma cacao HOM05D008304 ORTHO05D004056 5.6e-06 53.9 79 50.6
TAR626G0584 Trochodendron aralioides HOM05D005953 ORTHO05D004056 5.6e-06 53.9 78 47.4
Actinidia09855 Actinidia chinensis HOM05D005953 ORTHO05D004056 7.4e-06 53.5 73 49.3
DCAR_013006 Daucus carota HOM05D005953 ORTHO05D004056 7.4e-06 53.5 89 43.8
Psat0s741g0120 Pisum sativum HOM05D005953 ORTHO05D004056 7.4e-06 53.5 71 46.5
SalBow1G2785 Salvia bowleyana HOM05D005953 ORTHO05D004056 7.4e-06 53.5 73 52.1
Atru.chr6.2998 Acer truncatum HOM05D005953 ORTHO05D004056 9.6e-06 53.1 76 47.4
CDE02G2683 Ceratophyllum demersum HOM05D005953 ORTHO05D004056 9.6e-06 53.1 80 47.5
Sed0015284 Sechium edule HOM05D005953 ORTHO05D004056 9.6e-06 53.1 72 45.8
SEGI_25776 Sequoiadendron giganteum HOM05D025024 ORTHO05D004056 9.6e-06 53.1 70 47.1


User provided reference genes

Program Settings