Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr17g0556291 Helianthus annuus HOM05D004728 ORTHO05D002375 1.7e-107 392.9 229 100.0
HanXRQChr13g0391971 Helianthus annuus HOM05D004728 ORTHO05D002375 1.3e-62 243.8 209 61.2
HanXRQChr17g0561041 Helianthus annuus HOM05D004728 ORTHO05D002375 2.8e-54 216.1 214 57.9
ECA247G1585 Erigeron canadensis HOM05D004728 ORTHO05D002375 5.0e-43 178.7 200 54.5
Lsat_1_v5_gn_9_73441 Lactuca sativa HOM05D004728 ORTHO05D002375 9.2e-29 131.3 225 40.0
Lsat_1_v5_gn_1_2780 Lactuca sativa HOM05D004728 ORTHO05D002375 2.7e-28 129.8 226 42.5
HanXRQChr09g0250741 Helianthus annuus HOM05D004728 ORTHO05D002375 3.7e-22 109.4 223 34.5
ECA232G1403 Erigeron canadensis HOM05D000469 ORTHO05D000131 2.7e-20 103.2 154 53.2
EL10Ac1g01137 Beta vulgaris HOM05D004728 ORTHO05D002375 7.6e-15 85.1 163 31.3
HanXRQChr17g0556321 Helianthus annuus HOM05D004728 ORTHO05D002375 9.9e-15 84.7 160 29.4
Lsat_1_v5_gn_9_73380 Lactuca sativa HOM05D004728 ORTHO05D002375 2.9e-14 83.2 139 38.1
MSTRG.1389 Avicennia marina HOM05D004728 ORTHO05D002375 8.4e-14 81.6 143 46.9
Lsat_1_v5_gn_9_73501 Lactuca sativa HOM05D004728 ORTHO05D002375 1.4e-13 80.9 138 37.0
Oeu045990.1 Olea europaea HOM05D004728 ORTHO05D002375 1.2e-12 77.8 137 33.6
TAR376G0070 Trochodendron aralioides HOM05D015253 ORTHO05D002375 2.7e-12 76.6 88 43.2
Lj2A538G23 Lonicera japonica HOM05D004728 ORTHO05D002375 2.3e-11 73.6 95 38.9
AUR62027821 Chenopodium quinoa HOM05D059013 ORTHO05D002375 3.0e-11 73.2 87 39.1
Aqoxy476s002 Aquilegia oxysepala HOM05D004728 ORTHO05D002375 6.6e-11 72.0 81 38.3
Aqoxy6G00703 Aquilegia oxysepala HOM05D004728 ORTHO05D002375 6.6e-11 72.0 81 38.3
Lj4A728G42 Lonicera japonica HOM05D004728 ORTHO05D002375 6.6e-11 72.0 154 29.2
Migut.L00163 Erythranthe guttata HOM05D004728 ORTHO05D002375 1.1e-10 71.2 118 33.9
MSTRG.1471 Avicennia marina HOM05D004728 ORTHO05D002375 9.6e-10 68.2 125 33.6
Rhsim06G0077100 Rhododendron simsii HOM05D004728 ORTHO05D002375 1.3e-09 67.8 142 30.3
MSTRG.25397 Avicennia marina HOM05D004728 ORTHO05D002375 1.6e-09 67.4 123 33.3
PSO541G3905 Papaver somniferum HOM05D015253 ORTHO05D023059 1.6e-09 67.4 105 33.3
PSO675G1823 Papaver somniferum HOM05D015253 ORTHO05D023059 3.6e-09 66.2 100 35.0
MD15G1317800 Malus domestica HOM05D004728 ORTHO05D002375 6.2e-09 65.5 137 40.9
PSO675G0090 Papaver somniferum HOM05D015253 ORTHO05D023059 8.1e-09 65.1 102 32.4
DCAR_012878 Daucus carota HOM05D004728 ORTHO05D002375 1.8e-08 63.9 207 26.6
HanXRQChr05g0149651 Helianthus annuus HOM05D004728 ORTHO05D002375 1.8e-08 63.9 141 30.5
Oeu045992.1 Olea europaea HOM05D004728 ORTHO05D002375 1.8e-08 63.9 138 40.6
Migut.C01161 Erythranthe guttata HOM05D004728 ORTHO05D002375 2.4e-08 63.5 119 37.8
RcHm_v2.0_Chr2g0112251 Rosa chinensis HOM05D004728 ORTHO05D002375 2.4e-08 63.5 147 29.9
MSTRG.1387 Avicennia marina HOM05D004728 ORTHO05D002375 3.1e-08 63.2 93 38.7
Lj4A728T43 Lonicera japonica HOM05D004728 ORTHO05D002375 4.0e-08 62.8 131 30.5
Cfa017900 Carpinus fangiana HOM05D004728 ORTHO05D002375 6.9e-08 62.0 126 31.0
Dinv07081 Davidia involucrata HOM05D004728 ORTHO05D002375 6.9e-08 62.0 146 28.1
Lsat_1_v5_gn_1_2940 Lactuca sativa HOM05D004728 ORTHO05D002375 1.2e-07 61.2 94 33.0
PSO675G4345 Papaver somniferum HOM05D015253 ORTHO05D023059 1.2e-07 61.2 97 35.1
Prupe.6G194100 Prunus persica HOM05D004728 ORTHO05D002375 1.2e-07 61.2 60 48.3
SGA_v2.0_scaffold24G10482 Striga asiatica HOM05D004728 ORTHO05D002375 1.2e-07 61.2 140 34.3
Rhsim07G0205400 Rhododendron simsii HOM05D004728 ORTHO05D002375 1.5e-07 60.8 85 37.6
MSTRG.25340 Avicennia marina HOM05D004728 ORTHO05D002375 2.0e-07 60.5 182 30.2
FAN23G2235 Fragaria x ananassa HOM05D004728 ORTHO05D002375 2.6e-07 60.1 81 38.3
GSVIVG01009093001 Vitis vinifera HOM05D004728 ORTHO05D002375 2.6e-07 60.1 82 37.8
CANSAT01G0157 Cannabis sativa HOM05D004728 ORTHO05D002375 4.4e-07 59.3 80 35.0
SGA_v2.0_scaffold52G18993 Striga asiatica HOM05D004728 ORTHO05D002375 7.6e-07 58.5 134 35.1
MSTRG.1388 Avicennia marina HOM05D004728 ORTHO05D002375 9.9e-07 58.2 170 27.6
Lj4A728T44 Lonicera japonica HOM05D004728 ORTHO05D002375 9.9e-07 58.2 129 29.5
PGR042G1769 Punica granatum HOM05D004728 ORTHO05D002375 1.3e-06 57.8 129 29.5
CiPaw.16G032300 Carya illinoinensis HOM05D004728 ORTHO05D002375 1.7e-06 57.4 132 28.8
Duzib116G0314 Durio zibethinus HOM05D004728 ORTHO05D002375 1.7e-06 57.4 137 33.6
ECA247G3235 Erigeron canadensis HOM05D004728 ORTHO05D002375 2.2e-06 57.0 93 31.2
FvH4_5g36280 Fragaria vesca HOM05D004728 ORTHO05D002375 2.2e-06 57.0 124 27.4
FAN04G1034 Fragaria x ananassa HOM05D004728 ORTHO05D002375 2.2e-06 57.0 81 32.1
FAN19G1066 Fragaria x ananassa HOM05D004728 ORTHO05D002375 2.2e-06 57.0 148 28.4
Glyma.14G177800 Glycine max HOM05D012119 ORTHO05D002375 2.2e-06 57.0 165 37.6
SalBow7G1327 Salvia bowleyana HOM05D004728 ORTHO05D002375 2.9e-06 56.6 142 28.2
Prupe.6G194000 Prunus persica HOM05D004728 ORTHO05D002375 4.9e-06 55.8 70 35.7
SalBow8G1210 Salvia bowleyana HOM05D007310 ORTHO05D002375 4.9e-06 55.8 97 33.0
FAN26G1362 Fragaria x ananassa HOM05D004728 ORTHO05D002375 6.4e-06 55.5 149 27.5
PSO700G0018 Papaver somniferum HOM05D015253 ORTHO05D002375 6.4e-06 55.5 73 34.2
Peaxi162Scf01184g00014 Petunia axillaris HOM05D004728 ORTHO05D002375 6.4e-06 55.5 116 33.6
Duzib147G1195 Durio zibethinus HOM05D004728 ORTHO05D002375 8.4e-06 55.1 154 29.2
vmacro04704 Vaccinium macrocarpon HOM05D004728 ORTHO05D002375 8.4e-06 55.1 151 40.4


User provided reference genes

Program Settings