Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr17g0554561 Helianthus annuus HOM05D002824 ORTHO05D007162 1.6e-68 262.7 135 100.0
HanXRQChr00c0394g0574541 Helianthus annuus HOM05D002824 ORTHO05D007162 3.4e-63 245.0 135 94.8
HanXRQChr01g0020211 Helianthus annuus HOM05D002824 ORTHO05D007162 3.4e-63 245.0 135 94.8
HanXRQChr10g0284391 Helianthus annuus HOM05D002824 ORTHO05D007162 3.4e-63 245.0 135 94.8
HanXRQChr10g0318051 Helianthus annuus HOM05D002824 ORTHO05D007162 3.4e-63 245.0 135 94.8
HanXRQChr11g0326971 Helianthus annuus HOM05D002824 ORTHO05D007162 3.4e-63 245.0 135 94.8
HanXRQChr12g0369861 Helianthus annuus HOM05D002824 ORTHO05D007162 3.4e-63 245.0 135 94.8
HanXRQCPg0580191 Helianthus annuus HOM05D002824 ORTHO05D007162 3.4e-63 245.0 135 94.8
CAN.G1595.2 Capsicum annuum HOM05D002824 ORTHO05D007162 4.0e-56 221.5 135 84.4
Solyc00g500031.1 Solanum lycopersicum HOM05D002824 ORTHO05D007162 4.0e-56 221.5 135 84.4
Solyc00g500076.1 Solanum lycopersicum HOM05D002824 ORTHO05D007162 4.0e-56 221.5 135 84.4
DCAR_032521 Daucus carota HOM05D002824 ORTHO05D007162 1.2e-55 219.9 135 82.2
CAN.G327.20 Capsicum annuum HOM05D002824 ORTHO05D007162 1.7e-54 216.1 135 83.0
PGR111G0083 Punica granatum HOM05D002824 ORTHO05D007162 1.7e-54 216.1 135 82.2
CARHR282250 Cardamine hirsuta HOM05D002824 ORTHO05D007162 1.4e-53 213.0 135 80.0
ATCG00770 Arabidopsis thaliana HOM05D002824 ORTHO05D007162 1.9e-53 212.6 135 79.3
BNapus_Darmor_BZH_scaffold_253p00350 Brassica napus HOM05D002824 ORTHO05D007162 1.9e-53 212.6 135 79.3
Migut.D01328 Erythranthe guttata HOM05D002824 ORTHO05D007162 3.2e-53 211.8 135 81.5
BolSC29t60529H Brassica oleracea HOM05D002824 ORTHO05D007162 5.4e-53 211.1 135 78.5
BolSC29t60610H Brassica oleracea HOM05D002824 ORTHO05D007162 5.4e-53 211.1 135 78.5
BolSC35t60729H Brassica oleracea HOM05D002824 ORTHO05D007162 5.4e-53 211.1 135 78.5
BraSC103t45445Z Brassica rapa HOM05D002824 ORTHO05D007162 5.4e-53 211.1 135 78.5
BraSC138t45553Z Brassica rapa HOM05D002824 ORTHO05D007162 5.4e-53 211.1 135 78.5
AL2G20560 Arabidopsis lyrata HOM05D002824 ORTHO05D007162 7.0e-53 210.7 135 78.5
AL2G21720 Arabidopsis lyrata HOM05D002824 ORTHO05D007162 7.0e-53 210.7 135 78.5
HanXRQChr11g0345281 Helianthus annuus HOM05D002824 ORTHO05D007162 9.2e-53 210.3 117 93.2
C02p60170 Brassica napus HOM05D002824 ORTHO05D007162 2.0e-52 209.1 135 78.5
BNapus_Darmor_BZH_scaffold_287p00270 Brassica napus HOM05D002824 ORTHO05D007162 2.7e-52 208.8 135 77.8
BraSC58t46441Z Brassica rapa HOM05D002824 ORTHO05D007162 2.7e-52 208.8 135 77.8
RcHm_v2.0_CPg0501871 Rosa chinensis HOM05D002824 ORTHO05D007162 2.7e-52 208.8 135 79.3
PSO548G0051 Papaver somniferum HOM05D002824 ORTHO05D007162 3.9e-51 204.9 135 80.0
TAR375G0295 Trochodendron aralioides HOM05D002824 ORTHO05D007162 5.0e-51 204.5 135 79.3
Cpa.g.sc0.196 Carica papaya HOM05D002824 ORTHO05D007162 6.6e-51 204.1 130 82.3
Gohir.1Z050134 Gossypium hirsutum HOM05D002824 ORTHO05D007162 6.6e-51 204.1 135 77.0
Gohir.A12G024800 Gossypium hirsutum HOM05D002824 ORTHO05D007162 1.5e-50 203.0 135 77.0
Peaxi162Scf00299g00114 Petunia axillaris HOM05D002824 ORTHO05D007162 2.5e-50 202.2 125 84.8
HanXRQChr00c0925g0577901 Helianthus annuus HOM05D002824 ORTHO05D007162 3.3e-50 201.8 123 89.4
ClCG00G003160 Citrullus lanatus HOM05D002824 ORTHO05D007162 9.5e-50 200.3 134 76.1
Lalb_Chr25g0283371 Lupinus albus HOM05D002824 ORTHO05D007162 9.5e-50 200.3 135 76.3
Lsat_1_v5_gn_1_116300 Lactuca sativa HOM05D002824 ORTHO05D007162 1.6e-49 199.5 131 83.2
Nn021s41522 Nelumbo nucifera HOM05D002824 ORTHO05D007162 2.8e-49 198.7 135 77.0
Lalb_Chr03g0039321 Lupinus albus HOM05D002824 ORTHO05D007162 8.1e-49 197.2 135 75.6
Gohir.A06G056900 Gossypium hirsutum HOM05D002824 ORTHO05D007162 1.4e-48 196.4 135 74.1
Hund04057 Selenicereus undatus HOM05D002824 ORTHO05D007162 2.9e-46 188.7 129 79.1
Hund08802 Selenicereus undatus HOM05D002824 ORTHO05D007162 2.9e-46 188.7 129 79.1
Hund12527 Selenicereus undatus HOM05D002824 ORTHO05D007162 2.9e-46 188.7 129 79.1
Hund19320 Selenicereus undatus HOM05D002824 ORTHO05D007162 2.9e-46 188.7 129 79.1
Hund27962 Selenicereus undatus HOM05D002824 ORTHO05D007162 2.9e-46 188.7 129 79.1
Hund27985 Selenicereus undatus HOM05D002824 ORTHO05D007162 2.9e-46 188.7 129 79.1
Hund28109 Selenicereus undatus HOM05D002824 ORTHO05D007162 2.9e-46 188.7 129 79.1
Hund28268 Selenicereus undatus HOM05D002824 ORTHO05D007162 2.9e-46 188.7 129 79.1
Hund28459 Selenicereus undatus HOM05D002824 ORTHO05D007162 2.9e-46 188.7 129 79.1
Hund28519 Selenicereus undatus HOM05D002824 ORTHO05D007162 2.9e-46 188.7 129 79.1
Hund28529 Selenicereus undatus HOM05D002824 ORTHO05D007162 2.9e-46 188.7 129 79.1
Hund28632 Selenicereus undatus HOM05D002824 ORTHO05D007162 2.9e-46 188.7 129 79.1
Hund28678 Selenicereus undatus HOM05D002824 ORTHO05D007162 2.9e-46 188.7 129 79.1
Hund28746 Selenicereus undatus HOM05D002824 ORTHO05D007162 2.9e-46 188.7 129 79.1
Hund28759 Selenicereus undatus HOM05D002824 ORTHO05D007162 2.9e-46 188.7 129 79.1
Hund28778 Selenicereus undatus HOM05D002824 ORTHO05D007162 2.9e-46 188.7 129 79.1
Hund28846 Selenicereus undatus HOM05D002824 ORTHO05D007162 2.9e-46 188.7 129 79.1
Hund29022 Selenicereus undatus HOM05D002824 ORTHO05D007162 2.9e-46 188.7 129 79.1
Hund29036 Selenicereus undatus HOM05D002824 ORTHO05D007162 2.9e-46 188.7 129 79.1
Hund29164 Selenicereus undatus HOM05D002824 ORTHO05D007162 2.9e-46 188.7 129 79.1
Hund29217 Selenicereus undatus HOM05D002824 ORTHO05D007162 2.9e-46 188.7 129 79.1
Hund29505 Selenicereus undatus HOM05D002824 ORTHO05D007162 2.9e-46 188.7 129 79.1
Hund29525 Selenicereus undatus HOM05D002824 ORTHO05D007162 2.9e-46 188.7 129 79.1
Hund29537 Selenicereus undatus HOM05D002824 ORTHO05D007162 2.9e-46 188.7 129 79.1
Hund29554 Selenicereus undatus HOM05D002824 ORTHO05D007162 2.9e-46 188.7 129 79.1
Hund29593 Selenicereus undatus HOM05D002824 ORTHO05D007162 2.9e-46 188.7 129 79.1
Hund29605 Selenicereus undatus HOM05D002824 ORTHO05D007162 2.9e-46 188.7 129 79.1
Hund29612 Selenicereus undatus HOM05D002824 ORTHO05D007162 2.9e-46 188.7 129 79.1
Hund29682 Selenicereus undatus HOM05D002824 ORTHO05D007162 2.9e-46 188.7 129 79.1
Hund30031 Selenicereus undatus HOM05D002824 ORTHO05D007162 2.9e-46 188.7 129 79.1
Hund30272 Selenicereus undatus HOM05D002824 ORTHO05D007162 2.9e-46 188.7 129 79.1
Hund30490 Selenicereus undatus HOM05D002824 ORTHO05D007162 2.9e-46 188.7 129 79.1
Hund30495 Selenicereus undatus HOM05D002824 ORTHO05D007162 2.9e-46 188.7 129 79.1
Hund30544 Selenicereus undatus HOM05D002824 ORTHO05D007162 2.9e-46 188.7 129 79.1
Hund31501 Selenicereus undatus HOM05D002824 ORTHO05D007162 2.9e-46 188.7 129 79.1
BraA06t25384Z Brassica rapa HOM05D002824 ORTHO05D007162 6.4e-46 187.6 134 72.4
Hund27578 Selenicereus undatus HOM05D002824 ORTHO05D007162 9.2e-45 183.7 127 78.7
LjContig00319g0012184 Lotus japonicus HOM05D000964 ORTHO05D004047 1.2e-44 183.3 125 76.0
LjContig00319g0026138 Lotus japonicus HOM05D000964 ORTHO05D004047 1.2e-44 183.3 125 76.0
Lalb_Chr23g0274241 Lupinus albus HOM05D002824 ORTHO05D007162 4.6e-44 181.4 135 70.4
Gohir.A05G396400 Gossypium hirsutum HOM05D002824 ORTHO05D007162 6.0e-44 181.0 114 77.2
Gohir.D11G307000 Gossypium hirsutum HOM05D002824 ORTHO05D007162 6.0e-44 181.0 116 76.7
BolC9t57548H Brassica oleracea HOM05D002824 ORTHO05D007162 4.3e-42 174.9 117 76.9
Gohir.D01G102138 Gossypium hirsutum HOM05D002824 ORTHO05D007162 4.3e-42 174.9 117 76.9
Medtr4g059910 Medicago truncatula HOM05D002824 ORTHO05D007162 7.3e-42 174.1 104 80.8
Medtr4g034810 Medicago truncatula HOM05D002824 ORTHO05D007162 9.5e-42 173.7 118 74.6
LjContig00318g0002732 Lotus japonicus HOM05D002824 ORTHO05D007162 3.6e-41 171.8 135 67.4
Hund29957 Selenicereus undatus HOM05D002824 ORTHO05D007162 1.1e-37 160.2 115 76.5
Gorai.003G111500 Gossypium raimondii HOM05D002824 ORTHO05D007162 1.4e-37 159.8 117 71.8
Gohir.D03G105400 Gossypium hirsutum HOM05D002824 ORTHO05D007162 3.2e-37 158.7 117 70.9
SEGI_33981 Sequoiadendron giganteum HOM05D002824 ORTHO05D007162 5.4e-37 157.9 135 58.5
Gohir.A12G228400 Gossypium hirsutum HOM05D002824 ORTHO05D007162 8.6e-35 150.6 89 84.3
Eucgr.E03558 Eucalyptus grandis HOM05D002824 ORTHO05D007162 1.2e-33 146.7 92 80.4
Gorai.005G065900 Gossypium raimondii HOM05D002824 ORTHO05D007162 3.6e-33 145.2 113 65.5
Nitab4.5_0011882g0040 Nicotiana tabacum HOM05D002824 ORTHO05D007162 4.4e-31 138.3 82 85.4
GSVIVG01014320001 Vitis vinifera HOM05D002824 ORTHO05D007162 2.2e-30 136.0 93 78.5
BolC7t41708H Brassica oleracea HOM05D002824 ORTHO05D007162 3.2e-29 132.1 94 73.4
Nitab4.5_0000173g0110 Nicotiana tabacum HOM05D002824 ORTHO05D007162 1.3e-27 126.7 85 78.8
Gohir.D08G062280 Gossypium hirsutum HOM05D002824 ORTHO05D007162 1.5e-26 123.2 135 51.9
Phvul.001G158000 Phaseolus vulgaris HOM05D002824 ORTHO05D007162 1.5e-26 123.2 99 63.6
Thhalv10027382m.g Eutrema salsugineum HOM05D002824 ORTHO05D007162 4.3e-26 121.7 87 72.4
C09p46990 Brassica napus HOM05D002824 ORTHO05D007162 6.2e-25 117.9 82 74.4
Gohir.D08G194656 Gossypium hirsutum HOM05D002824 ORTHO05D007162 9.0e-24 114.0 135 51.1
SMO086G0055 Selaginella moellendorffii HOM05D002824 ORTHO05D007162 1.7e-22 109.8 134 45.5
Nitab4.5_0020737g0030 Nicotiana tabacum HOM05D002824 ORTHO05D007162 2.9e-22 109.0 77 75.3
EL10As15g24111 Beta vulgaris HOM05D002824 ORTHO05D007162 4.9e-22 108.2 93 60.2
HanXRQChr00c0593g0576371 Helianthus annuus HOM05D002824 ORTHO05D007162 1.2e-20 103.6 58 94.8
HanXRQChr04g0127481 Helianthus annuus HOM05D002824 ORTHO05D007162 1.2e-20 103.6 58 94.8
HanXRQChr11g0321101 Helianthus annuus HOM05D002824 ORTHO05D007162 1.2e-20 103.6 58 94.8
MBI05_g05353_MAGBIO Magnolia biondii HOM05D002824 ORTHO05D007162 1.6e-20 103.2 77 71.4
arahy.Tifrunner.gnm1.ann1.BAD1H7 Arachis hypogaea HOM05D002824 ORTHO05D007162 2.1e-20 102.8 90 64.4
Gorai.013G136400 Gossypium raimondii HOM05D002824 ORTHO05D007162 2.3e-19 99.4 70 72.9
Hund30069 Selenicereus undatus HOM05D002824 ORTHO05D008771 2.3e-19 99.4 63 82.5
Gohir.D13G121750 Gossypium hirsutum HOM05D002824 ORTHO05D007162 2.1e-17 92.8 70 71.4
Lalb_Chr20g0114531 Lupinus albus HOM05D002824 ORTHO05D007162 3.6e-17 92.0 70 70.0
MELO3C027652.2 Cucumis melo HOM05D002824 ORTHO05D007162 2.6e-15 85.9 60 73.3
BolSC56t61248H Brassica oleracea HOM05D002824 ORTHO05D007162 1.7e-14 83.2 58 74.1
BraSC59t46570Z Brassica rapa HOM05D002824 ORTHO05D007162 1.7e-14 83.2 58 74.1
Medtr3g035490 Medicago truncatula HOM05D001133 ORTHO05D000941 1.7e-14 83.2 52 78.8
Nitab4.5_0000173g0100 Nicotiana tabacum HOM05D000964 ORTHO05D001488 8.4e-14 80.9 55 76.4
Gohir.A08G063166 Gossypium hirsutum HOM05D002824 ORTHO05D007162 1.9e-13 79.7 58 69.0
BolSC49t61163H Brassica oleracea HOM05D002824 ORTHO05D007162 9.3e-13 77.4 53 75.5
BolSC35t60670H Brassica oleracea HOM05D002824 ORTHO05D007162 1.6e-12 76.6 58 69.0
MELO3C026355.2 Cucumis melo HOM05D002824 ORTHO05D007162 1.6e-12 76.6 58 67.2
Hund08020 Selenicereus undatus HOM05D002824 ORTHO05D007162 4.6e-12 75.1 78 55.1
FAN18G2960 Fragaria x ananassa HOM05D015635 ORTHO05D007162 5.1e-11 71.6 56 66.1
BraSC58t46502Z Brassica rapa HOM05D002824 ORTHO05D007162 1.5e-10 70.1 50 72.0
SEGI_01834 Sequoiadendron giganteum HOM05D000964 ORTHO05D003870 4.3e-10 68.6 56 57.1
SEGI_02369 Sequoiadendron giganteum HOM05D000964 ORTHO05D004047 4.3e-10 68.6 56 57.1
SEGI_04931 Sequoiadendron giganteum HOM05D000964 ORTHO05D004047 4.3e-10 68.6 56 57.1
SEGI_09600 Sequoiadendron giganteum HOM05D000964 ORTHO05D003870 4.3e-10 68.6 56 57.1
SEGI_17120 Sequoiadendron giganteum HOM05D000964 ORTHO05D004047 4.3e-10 68.6 56 57.1
SEGI_22757 Sequoiadendron giganteum HOM05D000964 ORTHO05D004047 4.3e-10 68.6 56 57.1
SEGI_27642 Sequoiadendron giganteum HOM05D000964 ORTHO05D003870 4.3e-10 68.6 56 57.1
BraSC103t45484Z Brassica rapa HOM05D002824 ORTHO05D007162 5.6e-10 68.2 63 65.1
SEGI_30352 Sequoiadendron giganteum HOM05D000964 ORTHO05D003870 5.6e-10 68.2 56 57.1
SGA_v2.0_scaffold208G41997 Striga asiatica HOM05D002824 ORTHO05D007162 1.3e-09 67.0 50 70.0
arahy.Tifrunner.gnm1.ann1.TW2HF4 Arachis hypogaea HOM05D000216 ORTHO05D000634 6.2e-09 64.7 73 53.4
MELO3C033570.2 Cucumis melo HOM05D002824 ORTHO05D007162 1.1e-08 63.9 60 61.7


User provided reference genes

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