Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr11g0323251 Helianthus annuus HOM05D000513 ORTHO05D219801 4.8e-25 117.1 61 100.0
HanXRQChr17g0554411 Helianthus annuus HOM05D000513 ORTHO05D225378 4.8e-25 117.1 61 100.0
HanXRQChr04g0117251 Helianthus annuus HOM05D000513 ORTHO05D003825 1.5e-07 58.9 40 77.5
BcaB02g08602 Brassica carinata HOM05D000513 ORTHO05D003825 3.4e-07 57.8 40 72.5
BcaB04g18467 Brassica carinata HOM05D000513 ORTHO05D003825 3.4e-07 57.8 40 72.5
ECA236G3134 Erigeron canadensis HOM05D000513 ORTHO05D003825 3.4e-07 57.8 40 75.0
AL7G36170 Arabidopsis lyrata HOM05D000513 ORTHO05D003825 4.5e-07 57.4 40 70.0
BcaC07g38128 Brassica carinata HOM05D000513 ORTHO05D003825 4.5e-07 57.4 40 70.0
A08p13610 Brassica napus HOM05D000513 ORTHO05D003825 4.5e-07 57.4 40 70.0
BolC8t48555H Brassica oleracea HOM05D000513 ORTHO05D003825 4.5e-07 57.4 40 70.0
BraA08t33347Z Brassica rapa HOM05D000513 ORTHO05D003825 4.5e-07 57.4 40 70.0
Aa31LG6G930 Aethionema arabicum HOM05D000513 ORTHO05D003825 7.7e-07 56.6 40 67.5
Lsat_1_v5_gn_7_34440 Lactuca sativa HOM05D000513 ORTHO05D003825 7.7e-07 56.6 40 72.5
AT4G18240 Arabidopsis thaliana HOM05D000513 ORTHO05D003825 1.0e-06 56.2 40 67.5
Carub.0007s2309 Capsella rubella HOM05D000513 ORTHO05D003825 1.0e-06 56.2 40 67.5
Lj1C1184T1 Lonicera japonica HOM05D000513 ORTHO05D003825 1.0e-06 56.2 40 67.5
Cpa.g.sc17.97 Carica papaya HOM05D000513 ORTHO05D003825 1.3e-06 55.8 43 65.1
CDE02G2485 Ceratophyllum demersum HOM05D000513 ORTHO05D003825 1.3e-06 55.8 40 65.0
Aqoxy1G01800 Aquilegia oxysepala HOM05D000513 ORTHO05D003825 1.7e-06 55.5 40 65.0
CANSAT35G1298 Cannabis sativa HOM05D000513 ORTHO05D003825 1.7e-06 55.5 40 65.0
Thhalv10024297m.g Eutrema salsugineum HOM05D000513 ORTHO05D003825 1.7e-06 55.5 40 67.5
Sp7g15870 Schrenkiella parvula HOM05D000513 ORTHO05D003825 1.7e-06 55.5 40 67.5
CARHR224990 Cardamine hirsuta HOM05D000513 ORTHO05D003825 2.2e-06 55.1 40 65.0
DCAR_027953 Daucus carota HOM05D000513 ORTHO05D003825 2.2e-06 55.1 40 67.5
Haze_05537 Corylus avellana HOM05D000513 ORTHO05D003825 2.9e-06 54.7 40 62.5
Nitab4.5_0011941g0020 Nicotiana tabacum HOM05D000513 ORTHO05D003825 2.9e-06 54.7 40 70.0
Nitab4.5_0016924g0010 Nicotiana tabacum HOM05D000513 ORTHO05D003825 2.9e-06 54.7 40 70.0
Prupe.4G076100 Prunus persica HOM05D000513 ORTHO05D003825 2.9e-06 54.7 40 67.5
GSVIVG01021404001 Vitis vinifera HOM05D000513 ORTHO05D003825 2.9e-06 54.7 40 67.5
CSS0046806 Camellia sinensis var. sinensis HOM05D000513 ORTHO05D003825 3.8e-06 54.3 40 65.0
Manes.15G118600 Manihot esculenta HOM05D000513 ORTHO05D003825 3.8e-06 54.3 40 65.0
THA.LOC104812845 Tarenaya hassleriana HOM05D000513 ORTHO05D003825 3.8e-06 54.3 40 70.0
Dinv32283 Davidia involucrata HOM05D000513 ORTHO05D003825 6.5e-06 53.5 40 65.0
Duzib235G0488 Durio zibethinus HOM05D000513 ORTHO05D003825 6.5e-06 53.5 40 65.0
Eucgr.D00323 Eucalyptus grandis HOM05D000513 ORTHO05D003825 6.5e-06 53.5 40 65.0
FvH4_3g06130 Fragaria vesca HOM05D000513 ORTHO05D003825 6.5e-06 53.5 40 65.0
FAN11G0900 Fragaria x ananassa HOM05D000513 ORTHO05D003825 6.5e-06 53.5 40 65.0
FAN16G3189 Fragaria x ananassa HOM05D000513 ORTHO05D003825 6.5e-06 53.5 40 65.0
FAN21G1465 Fragaria x ananassa HOM05D000513 ORTHO05D003825 6.5e-06 53.5 40 65.0
FAN25G0451 Fragaria x ananassa HOM05D000513 ORTHO05D003825 6.5e-06 53.5 40 65.0
Glyma.05G127800 Glycine max HOM05D000513 ORTHO05D003825 6.5e-06 53.5 40 65.0
Gohir.A06G197700 Gossypium hirsutum HOM05D000513 ORTHO05D003825 6.5e-06 53.5 40 60.0
MD05G1289600 Malus domestica HOM05D000513 ORTHO05D003825 6.5e-06 53.5 40 65.0
Sabra16G0231300 Salix brachista HOM05D000513 ORTHO05D003825 6.5e-06 53.5 40 62.5
Glyma.08G082600 Glycine max HOM05D000513 ORTHO05D003825 8.5e-06 53.1 40 65.0
Gorai.010G239400 Gossypium raimondii HOM05D000513 ORTHO05D003825 8.5e-06 53.1 40 62.5
MBI07_g07819_MAGBIO Magnolia biondii HOM05D000513 ORTHO05D003825 8.5e-06 53.1 40 62.5
PSO541G3505 Papaver somniferum HOM05D000513 ORTHO05D003825 8.5e-06 53.1 40 62.5
PSO675G5345 Papaver somniferum HOM05D000513 ORTHO05D003825 8.5e-06 53.1 40 62.5
Potri.001G351800 Populus trichocarpa HOM05D000513 ORTHO05D003825 8.5e-06 53.1 40 62.5
Sc05g0006470 Simmondsia chinensis HOM05D000513 ORTHO05D003825 8.5e-06 53.1 40 65.0


User provided reference genes

Program Settings