Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr17g0553541 Helianthus annuus HOM05D007014 ORTHO05D008894 6.3e-97 357.5 183 100.0
Potri.013G134102 Populus trichocarpa HOM05D007014 ORTHO05D008894 4.3e-61 238.4 157 72.0
Potri.013G134000 Populus trichocarpa HOM05D007014 ORTHO05D008894 2.1e-60 236.1 157 71.3
Nn1g06593 Nelumbo nucifera HOM05D007014 ORTHO05D008894 5.2e-59 231.5 156 71.2
Nitab4.5_0003022g0100 Nicotiana tabacum HOM05D007014 ORTHO05D008894 5.2e-59 231.5 153 71.9
PGSC0003DMG400007868 Solanum tuberosum HOM05D007014 ORTHO05D008894 5.2e-59 231.5 154 71.4
Dinv02170 Davidia involucrata HOM05D007014 ORTHO05D008894 1.2e-58 230.3 156 69.9
Sopen12g005310 Solanum pennellii HOM05D007014 ORTHO05D008894 1.5e-58 229.9 154 72.7
Peaxi162Scf02133g00022 Petunia axillaris HOM05D007014 ORTHO05D008894 2.0e-58 229.6 150 71.3
Lj8A113T47 Lonicera japonica HOM05D007014 ORTHO05D008894 2.6e-58 229.2 147 74.1
Solyc12g010680.3 Solanum lycopersicum HOM05D007014 ORTHO05D008894 3.4e-58 228.8 154 72.1
Cfa014594 Carpinus fangiana HOM05D007014 ORTHO05D008894 4.4e-58 228.4 150 70.0
GSVIVG01030373001 Vitis vinifera HOM05D007014 ORTHO05D008894 7.5e-58 227.6 149 73.8
Sabra13G0113800 Salix brachista HOM05D007014 ORTHO05D008894 9.9e-58 227.3 157 68.2
PGSC0003DMG400007866 Solanum tuberosum HOM05D007014 ORTHO05D008894 9.9e-58 227.3 154 69.5
Migut.H01076 Erythranthe guttata HOM05D007014 ORTHO05D008894 1.3e-57 226.9 157 66.9
CAN.G486.11 Capsicum annuum HOM05D007014 ORTHO05D008894 1.7e-57 226.5 153 69.3
QL08p038417 Quercus lobata HOM05D007014 ORTHO05D008894 2.2e-57 226.1 150 70.7
Haze_13147 Corylus avellana HOM05D007014 ORTHO05D008894 3.7e-57 225.3 150 70.0
Manes.12G090900 Manihot esculenta HOM05D007014 ORTHO05D008894 4.9e-57 224.9 153 69.3
Hma1.2p1_1201F.1_g266700 Hydrangea macrophylla HOM05D007014 ORTHO05D008894 6.4e-57 224.6 160 68.1
COL.COLO4_07554 Corchorus olitorius HOM05D007014 ORTHO05D008894 1.9e-56 223.0 158 68.4
Oeu029922.1 Olea europaea HOM05D007014 ORTHO05D008894 2.4e-56 222.6 154 68.2
Thecc.02G177900 Theobroma cacao HOM05D007014 ORTHO05D008894 4.1e-56 221.9 158 67.7
Ciclev10022631m.g Citrus clementina HOM05D007014 ORTHO05D008894 5.4e-56 221.5 153 69.3
ClCG02G017580 Citrullus lanatus HOM05D007014 ORTHO05D008894 1.2e-55 220.3 152 68.4
Ciclev10022606m.g Citrus clementina HOM05D007014 ORTHO05D008894 2.1e-55 219.5 152 67.8
Sp1g02550 Schrenkiella parvula HOM05D007014 ORTHO05D008894 3.5e-55 218.8 151 68.9
MELO3C024591.2 Cucumis melo HOM05D007014 ORTHO05D008894 4.6e-55 218.4 149 69.8
Carub.0001s0276 Capsella rubella HOM05D007014 ORTHO05D008894 6.0e-55 218.0 149 69.1
AL1G13150 Arabidopsis lyrata HOM05D007014 ORTHO05D008894 1.0e-54 217.2 151 68.9
CSS0024097 Camellia sinensis var. sinensis HOM05D007014 ORTHO05D008894 1.0e-54 217.2 154 68.2
AT1G03650 Arabidopsis thaliana HOM05D007014 ORTHO05D008894 1.7e-54 216.5 151 68.2
Lsat_1_v5_gn_8_133041 Lactuca sativa HOM05D007014 ORTHO05D008894 1.7e-54 216.5 160 66.2
Rhsim04G0068000 Rhododendron simsii HOM05D007014 ORTHO05D008894 1.7e-54 216.5 154 66.2
BcaC07g42241 Brassica carinata HOM05D007014 ORTHO05D008894 2.3e-54 216.1 151 68.9
SalBow1G7232 Salvia bowleyana HOM05D007014 ORTHO05D008894 2.3e-54 216.1 154 64.3
SGA_v2.0_scaffold307G48064 Striga asiatica HOM05D007014 ORTHO05D008894 2.3e-54 216.1 162 64.8
MSTRG.12316 Avicennia marina HOM05D007014 ORTHO05D008894 3.9e-54 215.3 156 65.4
RcHm_v2.0_Chr6g0277731 Rosa chinensis HOM05D007014 ORTHO05D008894 3.9e-54 215.3 157 65.6
CARHR002980 Cardamine hirsuta HOM05D007014 ORTHO05D008894 5.1e-54 214.9 150 68.0
vmacro09278 Vaccinium macrocarpon HOM05D007014 ORTHO05D008894 5.1e-54 214.9 157 63.7
Sed0017748 Sechium edule HOM05D007014 ORTHO05D008894 1.5e-53 213.4 147 68.7
Lj3g0024821 Lotus japonicus HOM05D007014 ORTHO05D008894 2.5e-53 212.6 156 68.6
Nitab4.5_0002575g0020 Nicotiana tabacum HOM05D007014 ORTHO05D008894 2.5e-53 212.6 170 62.9
Phvul.011G117200 Phaseolus vulgaris HOM05D007014 ORTHO05D008894 2.5e-53 212.6 156 68.6
Duzib052G1001 Durio zibethinus HOM05D007014 ORTHO05D008894 3.3e-53 212.2 162 65.4
Prupe.3G155400 Prunus persica HOM05D007014 ORTHO05D008894 3.3e-53 212.2 150 67.3
Glyma.12G111800 Glycine max HOM05D007014 ORTHO05D008894 4.3e-53 211.8 153 69.9
unitig_21.g20401 Utricularia gibba HOM05D007014 ORTHO05D008894 4.3e-53 211.8 152 64.5
Thhalv10008981m.g Eutrema salsugineum HOM05D007014 ORTHO05D008894 5.6e-53 211.5 149 68.5
TPR.G21768 Trifolium pratense HOM05D007014 ORTHO05D008894 5.6e-53 211.5 156 67.9
Aa31LG1G20970 Aethionema arabicum HOM05D007014 ORTHO05D008894 7.3e-53 211.1 151 67.5
CANSAT78G1474 Cannabis sativa HOM05D007014 ORTHO05D008894 7.3e-53 211.1 157 63.7
Gohir.D13G066000 Gossypium hirsutum HOM05D007014 ORTHO05D008894 7.3e-53 211.1 150 70.0
Gorai.013G075300 Gossypium raimondii HOM05D007014 ORTHO05D008894 7.3e-53 211.1 150 70.0
TWI36G0686 Tripterygium wilfordii HOM05D007014 ORTHO05D008894 9.5e-53 210.7 154 66.9
Aqoxy4G01010 Aquilegia oxysepala HOM05D007014 ORTHO05D008894 1.2e-52 210.3 155 64.5
Ca_28202_v3 Cicer arietinum L. HOM05D007014 ORTHO05D008894 1.2e-52 210.3 154 68.8
BcaC07g42236 Brassica carinata HOM05D007014 ORTHO05D008894 2.1e-52 209.5 149 67.1
ECA233G3399 Erigeron canadensis HOM05D007880 ORTHO05D003386 2.1e-52 209.5 138 76.1
Gohir.A13G056000 Gossypium hirsutum HOM05D007014 ORTHO05D008894 2.8e-52 209.1 154 68.2
Medtr4g046047 Medicago truncatula HOM05D007014 ORTHO05D008894 2.8e-52 209.1 156 66.7
EL10Ac9g20747 Beta vulgaris HOM05D007014 ORTHO05D008894 4.7e-52 208.4 149 66.4
FAN27G2134 Fragaria x ananassa HOM05D007014 ORTHO05D008894 8.1e-52 207.6 152 65.1
Cpa.g.sc34.144 Carica papaya HOM05D007014 ORTHO05D008894 1.4e-51 206.8 171 60.2
Cc05_g06870 Coffea canephora HOM05D007014 ORTHO05D008894 1.4e-51 206.8 154 65.6
Psat7g157760 Pisum sativum HOM05D007014 ORTHO05D008894 3.1e-51 205.7 144 70.1
FvH4_2g15130 Fragaria vesca HOM05D007014 ORTHO05D008894 4.0e-51 205.3 152 63.2
MD09G1249800 Malus domestica HOM05D007014 ORTHO05D008894 4.0e-51 205.3 161 63.4
TAR629G1268 Trochodendron aralioides HOM05D007014 ORTHO05D008894 6.8e-51 204.5 153 64.1
BraA09t42163Z Brassica rapa HOM05D007014 ORTHO05D008894 8.9e-51 204.1 150 66.0
CsaV3_6G013010 Cucumis sativus L. HOM05D007014 ORTHO05D008894 8.9e-51 204.1 163 62.0
Sc21g0002660 Simmondsia chinensis HOM05D007014 ORTHO05D008894 8.9e-51 204.1 153 64.1
BcaC07g42250 Brassica carinata HOM05D007014 ORTHO05D008894 1.2e-50 203.8 155 63.9
C08p52830 Brassica napus HOM05D007014 ORTHO05D008894 1.2e-50 203.8 155 63.9
FAN15G2141 Fragaria x ananassa HOM05D007014 ORTHO05D008894 1.5e-50 203.4 164 62.2
BolC8t52799H Brassica oleracea HOM05D007014 ORTHO05D008894 2.0e-50 203.0 150 66.0
CiPaw.03G175500 Carya illinoinensis HOM05D007014 ORTHO05D008894 4.4e-50 201.8 143 66.4
THA.LOC104801176 Tarenaya hassleriana HOM05D007014 ORTHO05D008894 1.7e-49 199.9 149 64.4
arahy.Tifrunner.gnm1.ann1.YPG8JQ Arachis hypogaea HOM05D007014 ORTHO05D008894 4.9e-49 198.4 153 62.1
BcaC07g42259 Brassica carinata HOM05D007014 ORTHO05D008894 8.4e-49 197.6 155 63.2
arahy.Tifrunner.gnm1.ann1.1ZYA2W Arachis hypogaea HOM05D007014 ORTHO05D008894 1.1e-48 197.2 153 62.1
PSO210G2618 Papaver somniferum HOM05D007014 ORTHO05D008894 1.4e-48 196.8 152 61.8
Glyma.06G293600 Glycine max HOM05D007014 ORTHO05D008894 3.2e-48 195.7 144 66.0
PSO832G4125 Papaver somniferum HOM05D007014 ORTHO05D008894 5.4e-48 194.9 152 61.8
arahy.Tifrunner.gnm1.ann1.UXPW02 Arachis hypogaea HOM05D007014 ORTHO05D008894 9.2e-48 194.1 153 60.8
MBI17_g43194_MAGBIO Magnolia biondii HOM05D007014 ORTHO05D008894 9.2e-48 194.1 138 68.8
VMungo1127G0420 Vigna mungo HOM05D007014 ORTHO05D008894 2.7e-47 192.6 180 56.7
CDE02G4296 Ceratophyllum demersum HOM05D007014 ORTHO05D008894 2.3e-46 189.5 156 57.7
ATR0680G283 Amborella trichopoda HOM05D007014 ORTHO05D008894 2.1e-44 183.0 154 59.7
FAN24G2354 Fragaria x ananassa HOM05D007014 ORTHO05D008894 3.6e-44 182.2 150 60.0
HPP92_002954 Vanilla planifolia HOM05D007014 ORTHO05D008894 8.1e-44 181.0 154 60.4
Zm00001eb044400 Zea mays HOM05D007014 ORTHO05D008894 8.1e-44 181.0 153 57.5
Zm00001eb044470 Zea mays HOM05D007014 ORTHO05D008894 8.1e-44 181.0 153 57.5
arahy.Tifrunner.gnm1.ann1.THUB96 Arachis hypogaea HOM05D007014 ORTHO05D008894 4.0e-43 178.7 132 65.2
TWI36G1550 Tripterygium wilfordii HOM05D007014 ORTHO05D008894 6.4e-41 171.4 158 50.6
Os10g0500400 Oryza sativa ssp. japonica HOM05D007014 ORTHO05D008894 1.7e-38 163.3 166 50.0
Lsat_1_v5_gn_8_132641 Lactuca sativa HOM05D007014 ORTHO05D008894 1.1e-37 160.6 93 82.8
Mapoly0101s0002 Marchantia polymorpha HOM05D007014 ORTHO05D008894 1.1e-37 160.6 151 54.3
Actinidia30478 Actinidia chinensis HOM05D007014 ORTHO05D008894 2.9e-33 146.0 96 68.8
C08p52730 Brassica napus HOM05D007014 ORTHO05D008894 4.2e-32 142.1 123 61.0
A09p68280 Brassica napus HOM05D001041 ORTHO05D000846 5.4e-32 141.7 114 64.9
Lalb_Chr01g0005301 Lupinus albus HOM05D007014 ORTHO05D008894 5.6e-29 131.7 91 65.9
AagrBONN_evm.TU.Sc2ySwM_344.4393 Anthoceros agrestis HOM05D007014 ORTHO05D008894 1.6e-28 130.2 177 42.9
Sabra11G0072100 Salix brachista HOM05D000036 ORTHO05D000095 8.4e-25 117.9 80 70.0
Sabra15G0066900 Salix brachista HOM05D000036 ORTHO05D000095 8.4e-25 117.9 80 70.0
QL12p004320 Quercus lobata HOM05D007014 ORTHO05D008894 1.9e-24 116.7 76 65.8
Ciclev10023600m.g Citrus clementina HOM05D007014 ORTHO05D008894 1.6e-23 113.6 76 72.4
Sabra13G0113700 Salix brachista HOM05D000264 ORTHO05D000152 5.1e-22 108.6 80 68.8
DCAR_013001 Daucus carota HOM05D007014 ORTHO05D008894 3.3e-21 105.9 85 63.5
Hund01169 Selenicereus undatus HOM05D007014 ORTHO05D008894 2.8e-20 102.8 77 64.9
AUR62037369 Chenopodium quinoa HOM05D007014 ORTHO05D008894 2.6e-18 96.3 64 70.3
MELO3C013609.2 Cucumis melo HOM05D007014 ORTHO05D008894 1.6e-15 87.0 68 60.3
SalBow1G7442 Salvia bowleyana HOM05D007014 ORTHO05D008894 9.7e-13 77.8 50 64.0
PRCOL_00005877 Prasinoderma coloniale HOM05D007014 ORTHO05D008894 2.8e-12 76.3 85 45.9
Cre17.g705950 Chlamydomonas reinhardtii HOM05D007014 ORTHO05D008894 2.5e-08 63.2 127 36.2
Pp3c2_27490 Physcomitrium patens HOM05D007014 ORTHO05D008894 4.6e-07 58.9 77 44.2


User provided reference genes

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