Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr17g0552351 Helianthus annuus HOM05D005809 ORTHO05D007259 1.8e-111 406.0 212 100.0
ECA247G0266 Erigeron canadensis HOM05D005809 ORTHO05D007259 4.3e-89 331.6 218 82.6
Lsat_1_v5_gn_8_63301 Lactuca sativa HOM05D005809 ORTHO05D007259 1.6e-83 313.2 227 77.1
Dinv41380 Davidia involucrata HOM05D005809 ORTHO05D007259 1.3e-77 293.5 231 70.1
QL02p093215 Quercus lobata HOM05D005809 ORTHO05D007259 1.2e-75 287.0 232 69.0
CSS0045900 Camellia sinensis var. sinensis HOM05D005809 ORTHO05D007259 1.6e-75 286.6 230 69.1
Dinv43244 Davidia involucrata HOM05D005809 ORTHO05D007259 3.5e-75 285.4 231 68.8
Migut.J01341 Erythranthe guttata HOM05D005809 ORTHO05D007259 3.5e-75 285.4 219 67.6
Gohir.D05G056000 Gossypium hirsutum HOM05D005809 ORTHO05D007259 4.6e-75 285.0 225 68.0
Gorai.009G057000 Gossypium raimondii HOM05D005809 ORTHO05D007259 1.8e-74 283.1 225 67.6
Hma1.2p1_0222F.1_g093550 Hydrangea macrophylla HOM05D005809 ORTHO05D007259 2.3e-74 282.7 224 67.9
Thecc.09G030800 Theobroma cacao HOM05D005809 ORTHO05D007259 2.3e-74 282.7 229 67.2
COL.COLO4_18808 Corchorus olitorius HOM05D005809 ORTHO05D007259 5.1e-74 281.6 229 66.8
Duzib187G1947 Durio zibethinus HOM05D005809 ORTHO05D007259 5.6e-73 278.1 225 67.1
MSTRG.19648 Avicennia marina HOM05D005809 ORTHO05D007259 1.4e-71 273.5 224 66.5
Prupe.7G262800 Prunus persica HOM05D005809 ORTHO05D007259 1.8e-71 273.1 224 65.2
MD02G1007700 Malus domestica HOM05D005809 ORTHO05D007259 2.4e-71 272.7 224 64.7
Eucgr.C02542 Eucalyptus grandis HOM05D005809 ORTHO05D007259 4.0e-71 271.9 231 66.2
Eucgr.C02492 Eucalyptus grandis HOM05D005809 ORTHO05D007259 9.0e-71 270.8 231 65.4
Nn8g39891 Nelumbo nucifera HOM05D005809 ORTHO05D007259 9.0e-71 270.8 226 65.0
Potri.006G184600 Populus trichocarpa HOM05D005809 ORTHO05D007259 9.0e-71 270.8 218 68.3
RcHm_v2.0_Chr2g0085671 Rosa chinensis HOM05D005809 ORTHO05D007259 9.0e-71 270.8 220 66.8
TAR636G3217 Trochodendron aralioides HOM05D005809 ORTHO05D007259 1.2e-70 270.4 232 65.5
CiPaw.15G168900 Carya illinoinensis HOM05D005809 ORTHO05D007259 2.0e-70 269.6 231 65.4
SalBow1G5910 Salvia bowleyana HOM05D005809 ORTHO05D007259 2.0e-70 269.6 215 68.4
GSVIVG01023603001 Vitis vinifera HOM05D005809 ORTHO05D007259 3.4e-70 268.9 231 62.8
CANSAT11G2656 Cannabis sativa HOM05D005809 ORTHO05D007259 7.6e-70 267.7 226 63.7
Solyc07g005640.3 Solanum lycopersicum HOM05D005809 ORTHO05D007259 1.0e-69 267.3 225 64.9
Sopen07g001740 Solanum pennellii HOM05D005809 ORTHO05D007259 2.9e-69 265.8 225 64.0
FAN23G2666 Fragaria x ananassa HOM05D005809 ORTHO05D007259 3.2e-68 262.3 220 65.0
TWI34G1090 Tripterygium wilfordii HOM05D005809 ORTHO05D007259 3.2e-68 262.3 233 62.2
Oeu052197.1 Olea europaea HOM05D005809 ORTHO05D007259 7.1e-68 261.2 226 62.4
Ca_03733_v3 Cicer arietinum L. HOM05D005809 ORTHO05D007259 1.6e-67 260.0 233 62.2
Sabra06G0140200 Salix brachista HOM05D005809 ORTHO05D007259 1.6e-67 260.0 227 63.9
PGSC0003DMG401011139 Solanum tuberosum HOM05D005809 ORTHO05D007259 1.6e-67 260.0 230 62.2
Aqoxy2G02328 Aquilegia oxysepala HOM05D005809 ORTHO05D007259 2.7e-67 259.2 215 63.7
Ciclev10009378m.g Citrus clementina HOM05D005809 ORTHO05D007259 3.5e-67 258.8 231 61.5
MELO3C004136.2 Cucumis melo HOM05D005809 ORTHO05D007259 7.9e-67 257.7 230 58.3
CsaV3_2G007490 Cucumis sativus L. HOM05D005809 ORTHO05D007259 1.0e-66 257.3 231 59.3
Manes.06G033951 Manihot esculenta HOM05D005809 ORTHO05D007259 1.0e-66 257.3 231 64.1
Phvul.009G195100 Phaseolus vulgaris HOM05D005809 ORTHO05D007259 1.3e-66 256.9 223 62.3
Sed0001225 Sechium edule HOM05D005809 ORTHO05D007259 1.3e-66 256.9 230 58.3
Lj6g0016819 Lotus japonicus HOM05D005809 ORTHO05D007259 2.3e-66 256.1 229 59.4
Psat1g021800 Pisum sativum HOM05D005809 ORTHO05D007259 2.3e-66 256.1 220 63.2
CARHR271730 Cardamine hirsuta HOM05D005809 ORTHO05D007259 3.0e-66 255.8 227 60.4
FvH4_1g00940 Fragaria vesca HOM05D005809 ORTHO05D007259 3.0e-66 255.8 212 64.2
Duzib168G0271 Durio zibethinus HOM05D005809 ORTHO05D007259 3.9e-66 255.4 218 65.6
Medtr2g460780 Medicago truncatula HOM05D005809 ORTHO05D007259 5.1e-66 255.0 228 61.8
Glyma.06G219400 Glycine max HOM05D005809 ORTHO05D007259 6.7e-66 254.6 224 63.8
PGR102G1797 Punica granatum HOM05D005809 ORTHO05D007259 6.7e-66 254.6 227 62.6
Haze_19206 Corylus avellana HOM05D005809 ORTHO05D007259 8.7e-66 254.2 209 65.6
Lalb_Chr23g0275681 Lupinus albus HOM05D005809 ORTHO05D007259 8.7e-66 254.2 231 58.9
THA.LOC104817821 Tarenaya hassleriana HOM05D005809 ORTHO05D007259 1.1e-65 253.8 222 60.8
AL8G34030 Arabidopsis lyrata HOM05D005809 ORTHO05D007259 1.5e-65 253.4 227 61.7
TPR.G20735 Trifolium pratense HOM05D005809 ORTHO05D007259 1.5e-65 253.4 230 60.4
unitig_746.g26584 Utricularia gibba HOM05D005809 ORTHO05D007259 1.5e-65 253.4 220 60.5
Ah.02g128190 Amaranthus hybridus HOM05D005809 ORTHO05D007259 1.9e-65 253.1 214 65.0
Carub.0008s1848 Capsella rubella HOM05D005809 ORTHO05D007259 2.5e-65 252.7 227 59.5
TWI32G0918 Tripterygium wilfordii HOM05D005809 ORTHO05D007259 3.3e-65 252.3 228 59.6
AT5G57950 Arabidopsis thaliana HOM05D005809 ORTHO05D007259 2.1e-64 249.6 228 59.2
Glyma.06G219200 Glycine max HOM05D005809 ORTHO05D007259 2.1e-64 249.6 224 61.6
Sc08g0005640 Simmondsia chinensis HOM05D005809 ORTHO05D007259 2.8e-64 249.2 224 58.9
arahy.Tifrunner.gnm1.ann1.46B1EJ Arachis hypogaea HOM05D005809 ORTHO05D007259 3.7e-64 248.8 225 60.9
A10p16200 Brassica napus HOM05D005809 ORTHO05D007259 3.7e-64 248.8 220 60.0
C09p49790 Brassica napus HOM05D005809 ORTHO05D007259 3.7e-64 248.8 219 59.4
BolC9t57830H Brassica oleracea HOM05D005809 ORTHO05D007259 3.7e-64 248.8 219 59.4
BraA10t43609Z Brassica rapa HOM05D005809 ORTHO05D007259 4.8e-64 248.4 224 58.5
Atru.chr7.51 Acer truncatum HOM05D005809 ORTHO05D007259 6.2e-64 248.1 228 61.4
Sp6g19620 Schrenkiella parvula HOM05D005809 ORTHO05D007259 8.2e-64 247.7 227 59.9
Actinidia04301 Actinidia chinensis HOM05D005809 ORTHO05D007259 1.4e-63 246.9 213 64.3
Cpa.g.sc46.154 Carica papaya HOM05D005809 ORTHO05D007259 4.1e-63 245.4 220 63.2
arahy.Tifrunner.gnm1.ann1.Z5GGTZ Arachis hypogaea HOM05D005809 ORTHO05D007259 1.7e-61 240.0 224 58.9
PSO782G1751 Papaver somniferum HOM05D005809 ORTHO05D007259 1.7e-61 240.0 216 60.2
vmacro16802 Vaccinium macrocarpon HOM05D005809 ORTHO05D007259 1.7e-61 240.0 281 52.3
PSO063G2086 Papaver somniferum HOM05D005809 ORTHO05D007259 2.9e-61 239.2 216 60.2
SGA_v2.0_scaffold265G46107 Striga asiatica HOM05D005809 ORTHO05D007259 3.8e-61 238.8 207 62.8
Thhalv10014592m.g Eutrema salsugineum HOM05D005809 ORTHO05D007259 1.4e-60 236.9 221 60.2
CAN.G160.58 Capsicum annuum HOM05D005809 ORTHO05D007259 1.9e-60 236.5 228 57.9
DCAR_017909 Daucus carota HOM05D005809 ORTHO05D007259 3.2e-60 235.7 245 57.1
Zm00001eb312980 Zea mays HOM05D005809 ORTHO05D007259 7.9e-59 231.1 214 57.9
Gohir.A05G055000 Gossypium hirsutum HOM05D005809 ORTHO05D007259 2.3e-58 229.6 230 59.1
HPP92_016019 Vanilla planifolia HOM05D005809 ORTHO05D007259 3.9e-58 228.8 216 56.5
Aa31LG3G13770 Aethionema arabicum HOM05D000853 ORTHO05D000723 5.1e-58 228.4 223 55.2
Rhsim01G0033400 Rhododendron simsii HOM05D005809 ORTHO05D007259 5.1e-58 228.4 225 59.6
ATR0739G206 Amborella trichopoda HOM05D005809 ORTHO05D007259 1.5e-57 226.9 227 55.5
Peaxi162Scf00401g00082 Petunia axillaris HOM05D005809 ORTHO05D007259 2.2e-56 223.0 216 58.8
Os09g0420600 Oryza sativa ssp. japonica HOM05D005809 ORTHO05D007259 2.8e-56 222.6 214 56.1
ClCG02G014530 Citrullus lanatus HOM05D005809 ORTHO05D007259 1.4e-55 220.3 211 56.9
Hund01517 Selenicereus undatus HOM05D005809 ORTHO05D007259 9.0e-55 217.6 205 58.0
Nitab4.5_0005653g0040 Nicotiana tabacum HOM05D005809 ORTHO05D007259 1.5e-54 216.9 223 57.0
Nitab4.5_0001571g0010 Nicotiana tabacum HOM05D005809 ORTHO05D007259 4.5e-54 215.3 237 54.0
Lj9C717G7 Lonicera japonica HOM05D005809 ORTHO05D007259 2.2e-53 213.0 206 58.7
SEGI_31268 Sequoiadendron giganteum HOM05D005809 ORTHO05D007259 2.2e-53 213.0 231 52.4
CDE12G0564 Ceratophyllum demersum HOM05D005809 ORTHO05D007259 2.9e-53 212.6 238 52.5
HPP92_016035 Vanilla planifolia HOM05D005809 ORTHO05D007259 8.5e-53 211.1 195 57.9
AUR62035200 Chenopodium quinoa HOM05D005809 ORTHO05D007259 2.1e-51 206.5 212 55.2
AagrBONN_evm.TU.Sc2ySwM_117.3948 Anthoceros agrestis HOM05D005809 ORTHO05D007259 8.8e-50 201.1 233 49.4
SMO361G0343 Selaginella moellendorffii HOM05D005809 ORTHO05D007259 2.0e-49 199.9 226 49.1
SMO361G0248 Selaginella moellendorffii HOM05D005809 ORTHO05D007259 2.8e-48 196.1 220 50.0
Mapoly0003s0072 Marchantia polymorpha HOM05D005809 ORTHO05D007259 4.8e-48 195.3 234 47.4
FAN28G0834 Fragaria x ananassa HOM05D005809 ORTHO05D007259 1.1e-47 194.1 220 51.8
Pp3c8_2960 Physcomitrium patens HOM05D005809 ORTHO05D007259 9.1e-47 191.0 230 46.1
Pp3c16_13530 Physcomitrium patens HOM05D005809 ORTHO05D007259 2.2e-45 186.4 218 45.9
Actinidia38322 Actinidia chinensis HOM05D005809 ORTHO05D007259 3.2e-44 182.6 191 57.6
vmacro05441 Vaccinium macrocarpon HOM05D005809 ORTHO05D007259 9.4e-44 181.0 206 51.9
Dinv42856 Davidia involucrata HOM05D005809 ORTHO05D007259 1.6e-43 180.3 165 64.2
SHI02853 Sapria himalayana HOM05D005809 ORTHO05D007259 2.1e-43 179.9 204 52.0
Hma1.2p1_0010F.1_g006710 Hydrangea macrophylla HOM05D005809 ORTHO05D007259 1.0e-37 161.0 154 57.8
Sed0002126 Sechium edule HOM05D005809 ORTHO05D007259 1.9e-36 156.8 159 55.3
CBR_g38078 Chara braunii HOM05D000019 ORTHO05D000048 9.1e-31 137.9 261 34.1
MCO13G469 Micromonas commoda HOM05D005809 ORTHO05D007259 3.8e-29 132.5 205 38.0
FAN21G3780 Fragaria x ananassa HOM05D005809 ORTHO05D007259 3.2e-28 129.4 179 46.9
Cc06_g14980 Coffea canephora HOM05D005809 ORTHO05D007259 2.7e-27 126.3 104 63.5
Cc06_g14990 Coffea canephora HOM05D005809 ORTHO05D007259 2.7e-27 126.3 96 64.6
EL10As1g23143 Beta vulgaris HOM05D005809 ORTHO05D007259 1.5e-25 120.6 116 58.6
FAN25G0559 Fragaria x ananassa HOM05D005809 ORTHO05D007259 5.7e-25 118.6 116 57.8
RcHm_v2.0_Chr5g0031291 Rosa chinensis HOM05D005809 ORTHO05D007259 7.5e-25 118.2 134 53.7
Aa31LG1G19310 Aethionema arabicum HOM05D005809 ORTHO05D007259 3.7e-24 115.9 97 61.9
Hma1.2p1_0222F.1_g093570 Hydrangea macrophylla HOM05D005809 ORTHO05D007259 7.0e-23 111.7 75 77.3
Cre04.g226950 Chlamydomonas reinhardtii HOM05D005809 ORTHO05D007259 1.6e-22 110.5 274 29.6
PRCOL_00000214 Prasinoderma coloniale HOM05D005809 ORTHO05D007259 8.0e-19 98.2 196 34.7
EL10As1g23140 Beta vulgaris HOM05D005809 ORTHO05D007259 1.0e-18 97.8 73 64.4
Oeu007777.1 Olea europaea HOM05D005809 ORTHO05D007259 1.4e-18 97.4 91 56.0
FvH4_3g18530 Fragaria vesca HOM05D005809 ORTHO05D007259 3.0e-18 96.3 148 43.2
FAN11G2737 Fragaria x ananassa HOM05D005809 ORTHO05D007259 3.0e-18 96.3 148 43.2
Oeu038698.1 Olea europaea HOM05D005809 ORTHO05D007259 5.2e-18 95.5 91 54.9
Oeu049715.1 Olea europaea HOM05D005809 ORTHO05D007259 1.2e-17 94.4 82 56.1
Oeu017561.1 Olea europaea HOM05D005809 ORTHO05D007259 9.8e-17 91.3 91 52.7
FAN26G2229 Fragaria x ananassa HOM05D005809 ORTHO05D007259 5.0e-13 79.0 61 63.9
vmacro11582 Vaccinium macrocarpon HOM05D005809 ORTHO05D010075 1.2e-11 74.3 61 63.9
Oeu029241.1 Olea europaea HOM05D005809 ORTHO05D007259 2.1e-11 73.6 77 48.1
MD09G1175000 Malus domestica HOM05D005809 ORTHO05D007259 2.9e-08 63.2 85 52.9
CSS0015204 Camellia sinensis var. sinensis HOM05D000853 ORTHO05D000723 2.4e-07 60.1 82 51.2


User provided reference genes

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