Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr17g0551521 Helianthus annuus HOM05D002793 ORTHO05D002965 1.3e-165 586.3 292 100.0
ECA246G1978 Erigeron canadensis HOM05D002793 ORTHO05D002965 6.2e-54 215.3 319 43.6
ECA246G3663 Erigeron canadensis HOM05D002793 ORTHO05D002965 3.2e-50 203.0 318 41.8
Dinv33324 Davidia involucrata HOM05D002793 ORTHO05D002965 3.9e-16 89.7 371 29.4
Nitab4.5_0000559g0300 Nicotiana tabacum HOM05D002793 ORTHO05D002965 3.9e-16 89.7 366 28.1
CSS0004091 Camellia sinensis var. sinensis HOM05D002793 ORTHO05D002965 4.3e-15 86.3 376 29.0
Dinv25648 Davidia involucrata HOM05D002793 ORTHO05D002965 1.8e-13 80.9 369 28.2
Actinidia30867 Actinidia chinensis HOM05D002793 ORTHO05D002965 4.1e-13 79.7 329 28.9
GSVIVG01010528001 Vitis vinifera HOM05D002793 ORTHO05D002965 1.2e-12 78.2 391 26.9
Dinv11689 Davidia involucrata HOM05D002793 ORTHO05D002965 2.0e-12 77.4 393 26.0
CSS0013139 Camellia sinensis var. sinensis HOM05D002793 ORTHO05D002965 7.6e-12 75.5 403 26.3
Haze_14896 Corylus avellana HOM05D002793 ORTHO05D002965 3.8e-11 73.2 384 27.6
Thecc.04G040100 Theobroma cacao HOM05D002793 ORTHO05D002965 8.5e-11 72.0 394 27.9
Thecc.02G201800 Theobroma cacao HOM05D002793 ORTHO05D002965 1.4e-10 71.2 393 27.5
MELO3C014898.2 Cucumis melo HOM05D002793 ORTHO05D002965 1.9e-10 70.9 382 26.4
COL.COLO4_13290 Corchorus olitorius HOM05D002793 ORTHO05D002965 3.2e-10 70.1 391 26.6
Gorai.005G164100 Gossypium raimondii HOM05D002793 ORTHO05D002965 3.2e-10 70.1 399 26.3
Potri.001G327500 Populus trichocarpa HOM05D002793 ORTHO05D002965 4.2e-10 69.7 389 28.3
ECA233G4400 Erigeron canadensis HOM05D002793 ORTHO05D002965 9.3e-10 68.6 358 26.3
Gohir.D02G146600 Gossypium hirsutum HOM05D002793 ORTHO05D002965 9.3e-10 68.6 399 27.1
Duzib147G0228 Durio zibethinus HOM05D002793 ORTHO05D002965 6.1e-09 65.9 396 25.5
Medtr7g028590 Medicago truncatula HOM05D002793 ORTHO05D002965 6.1e-09 65.9 367 26.7
Duzib268G1080 Durio zibethinus HOM05D002793 ORTHO05D002965 7.9e-09 65.5 397 27.5
ECA246G3465 Erigeron canadensis HOM05D002793 ORTHO05D002965 7.9e-09 65.5 379 24.0
HanXRQChr08g0209951 Helianthus annuus HOM05D002793 ORTHO05D002965 7.9e-09 65.5 341 27.0
MD13G1122400 Malus domestica HOM05D002793 ORTHO05D002965 1.8e-08 64.3 398 23.9
MSTRG.484 Avicennia marina HOM05D002793 ORTHO05D002965 3.9e-08 63.2 150 32.7
Actinidia39798 Actinidia chinensis HOM05D002793 ORTHO05D002965 8.7e-08 62.0 393 26.5
CiPaw.06G105000 Carya illinoinensis HOM05D002793 ORTHO05D002965 1.1e-07 61.6 411 23.6
Sp6g29910 Schrenkiella parvula HOM05D002793 ORTHO05D002965 1.1e-07 61.6 371 25.3
Sed0007037 Sechium edule HOM05D002793 ORTHO05D002965 1.1e-07 61.6 138 37.7
Cc00_g14540 Coffea canephora HOM05D002793 ORTHO05D002965 1.5e-07 61.2 366 24.9
Glyma.19G094600 Glycine max HOM05D002793 ORTHO05D002965 1.5e-07 61.2 390 24.4
Gohir.A03G124200 Gossypium hirsutum HOM05D002793 ORTHO05D002965 1.5e-07 61.2 393 26.2
Manes.13G009000 Manihot esculenta HOM05D002793 ORTHO05D002965 1.5e-07 61.2 401 22.9
AL6G24750 Arabidopsis lyrata HOM05D002793 ORTHO05D002965 1.9e-07 60.8 373 26.5
Glyma.16G054300 Glycine max HOM05D002793 ORTHO05D002965 1.9e-07 60.8 390 24.1
GSVIVG01033059001 Vitis vinifera HOM05D002793 ORTHO05D002965 2.5e-07 60.5 367 24.0
ClCG05G013700 Citrullus lanatus HOM05D002793 ORTHO05D002965 3.3e-07 60.1 137 37.2
CSS0031398 Camellia sinensis var. sinensis HOM05D002793 ORTHO05D002965 4.3e-07 59.7 149 32.9
Ciclev10018081m.g Citrus clementina HOM05D002793 ORTHO05D002965 5.7e-07 59.3 383 27.4
Carub.0006s1228 Capsella rubella HOM05D002793 ORTHO05D002965 7.4e-07 58.9 363 24.5
QL03p051728 Quercus lobata HOM05D002793 ORTHO05D002965 7.4e-07 58.9 404 23.8
Aa31LG11G14890 Aethionema arabicum HOM05D002793 ORTHO05D002965 2.2e-06 57.4 150 31.3
Gohir.D05G311000 Gossypium hirsutum HOM05D002793 ORTHO05D002965 2.2e-06 57.4 400 26.0
HanXRQChr06g0174781 Helianthus annuus HOM05D002793 ORTHO05D002965 2.2e-06 57.4 149 30.9
TPR.G8576 Trifolium pratense HOM05D002793 ORTHO05D002965 2.8e-06 57.0 373 26.0
Eucgr.I01630 Eucalyptus grandis HOM05D002793 ORTHO05D002965 3.7e-06 56.6 316 28.2
Nitab4.5_0000542g0010 Nicotiana tabacum HOM05D002793 ORTHO05D002965 3.7e-06 56.6 324 23.5
Prupe.1G222800 Prunus persica HOM05D002793 ORTHO05D002965 3.7e-06 56.6 401 23.2
Gohir.A05G310200 Gossypium hirsutum HOM05D002793 ORTHO05D002965 4.8e-06 56.2 401 24.4
Lj6A830G30 Lonicera japonica HOM05D002793 ORTHO05D002965 4.8e-06 56.2 140 32.1
Nitab4.5_0027193g0010 Nicotiana tabacum HOM05D002793 ORTHO05D002965 4.8e-06 56.2 308 26.0
TWI60G1054 Tripterygium wilfordii HOM05D002793 ORTHO05D002965 6.3e-06 55.8 379 24.5
Thhalv10013936m.g Eutrema salsugineum HOM05D002793 ORTHO05D002965 8.2e-06 55.5 369 24.7
Lsat_1_v5_gn_3_31200 Lactuca sativa HOM05D002793 ORTHO05D002965 8.2e-06 55.5 146 30.1


User provided reference genes

Program Settings