Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr17g0550951 Helianthus annuus HOM05D006071 ORTHO05D007462 4.0e-145 518.1 259 100.0
HanXRQChr17g0550941 Helianthus annuus HOM05D006071 ORTHO05D007462 5.1e-108 394.8 230 88.7
Lsat_1_v5_gn_0_22580 Lactuca sativa HOM05D006071 ORTHO05D007462 4.5e-72 275.4 238 66.0
ECA246G2252 Erigeron canadensis HOM05D006071 ORTHO05D007462 3.4e-64 249.2 238 63.9
Dinv33279 Davidia involucrata HOM05D006071 ORTHO05D007462 5.1e-44 182.2 256 52.3
Lju41A60G26 Lonicera japonica HOM05D006071 ORTHO05D007462 2.9e-39 166.4 257 44.7
PSO478G4855 Papaver somniferum HOM05D006071 ORTHO05D007462 1.1e-38 164.5 243 45.7
ClCG05G012640 Citrullus lanatus HOM05D006071 ORTHO05D007462 1.6e-37 160.6 247 48.6
TWI32G0148 Tripterygium wilfordii HOM05D006071 ORTHO05D007462 1.6e-37 160.6 243 50.6
GSVIVG01032990001 Vitis vinifera HOM05D006071 ORTHO05D007462 1.6e-37 160.6 245 48.6
Hma1.2p1_0421F.1_g149970 Hydrangea macrophylla HOM05D006071 ORTHO05D007462 2.1e-37 160.2 253 46.2
TPR.G10339 Trifolium pratense HOM05D006071 ORTHO05D007462 2.1e-37 160.2 249 48.6
Ah.03g136370 Amaranthus hybridus HOM05D006071 ORTHO05D007462 2.7e-37 159.8 242 49.6
DCAR_014471 Daucus carota HOM05D006071 ORTHO05D007462 3.6e-37 159.5 181 53.6
Duzib187G0315 Durio zibethinus HOM05D006071 ORTHO05D007462 4.7e-37 159.1 237 46.8
PSO017G0597 Papaver somniferum HOM05D006071 ORTHO05D007462 1.4e-36 157.5 243 44.9
Thecc.04G047500 Theobroma cacao HOM05D006071 ORTHO05D007462 2.3e-36 156.8 238 48.7
Manes.11G077000 Manihot esculenta HOM05D006071 ORTHO05D007462 3.9e-36 156.0 245 47.3
Sed0023591 Sechium edule HOM05D006071 ORTHO05D007462 5.2e-36 155.6 256 47.3
CsaV3_3G027770 Cucumis sativus L. HOM05D006071 ORTHO05D007462 8.8e-36 154.8 247 47.0
Actinidia36244 Actinidia chinensis HOM05D000877 ORTHO05D001509 1.1e-35 154.5 224 46.0
Rhsim10G0001400 Rhododendron simsii HOM05D006071 ORTHO05D007462 1.5e-35 154.1 251 44.2
Ciclev10014332m.g Citrus clementina HOM05D006071 ORTHO05D007462 2.0e-35 153.7 242 45.9
Hma1.2p1_0421F.1_g149975 Hydrangea macrophylla HOM05D006071 ORTHO05D007462 3.3e-35 152.9 112 68.8
MELO3C014817.2 Cucumis melo HOM05D006071 ORTHO05D007462 7.4e-35 151.8 247 46.6
Hma1.2p1_0033F.1_g021090 Hydrangea macrophylla HOM05D006071 ORTHO05D007462 7.4e-35 151.8 254 46.5
Nitab4.5_0000519g0320 Nicotiana tabacum HOM05D006071 ORTHO05D007462 7.4e-35 151.8 235 46.4
Sopen02g039190 Solanum pennellii HOM05D006071 ORTHO05D007462 9.7e-35 151.4 111 67.6
Hund04198 Selenicereus undatus HOM05D006071 ORTHO05D007462 3.7e-34 149.4 249 46.2
QL02p069613 Quercus lobata HOM05D006071 ORTHO05D007462 6.3e-34 148.7 203 50.2
Nitab4.5_0002172g0120 Nicotiana tabacum HOM05D006071 ORTHO05D007462 1.1e-33 147.9 235 45.1
Medtr7g084020 Medicago truncatula HOM05D006071 ORTHO05D007462 1.4e-33 147.5 246 46.7
Peaxi162Scf00420g00836 Petunia axillaris HOM05D006071 ORTHO05D007462 1.8e-33 147.1 170 52.9
PGR142G0457 Punica granatum HOM05D006071 ORTHO05D007462 1.8e-33 147.1 233 45.9
EL10Ac6g13395 Beta vulgaris HOM05D006071 ORTHO05D007462 2.4e-33 146.7 251 45.0
VMungo1383G1903 Vigna mungo HOM05D006071 ORTHO05D007462 3.1e-33 146.4 218 48.6
Potri.014G145300 Populus trichocarpa HOM05D006071 ORTHO05D007462 4.1e-33 146.0 242 44.6
vmacro22244 Vaccinium macrocarpon HOM05D006071 ORTHO05D007462 4.1e-33 146.0 109 64.2
Migut.K01485 Erythranthe guttata HOM05D006071 ORTHO05D007462 7.0e-33 145.2 242 45.0
Phvul.001G084800 Phaseolus vulgaris HOM05D006071 ORTHO05D007462 7.0e-33 145.2 203 48.3
Gohir.D10G081100 Gossypium hirsutum HOM05D006071 ORTHO05D007462 2.0e-32 143.7 232 45.7
Haze_14947 Corylus avellana HOM05D006071 ORTHO05D007462 2.6e-32 143.3 255 44.3
CANSAT64G2805 Cannabis sativa HOM05D006071 ORTHO05D007462 3.5e-32 142.9 195 49.7
FvH4_6g54271 Fragaria vesca HOM05D006071 ORTHO05D007462 3.5e-32 142.9 242 43.8
RcHm_v2.0_Chr2g0176461 Rosa chinensis HOM05D006071 ORTHO05D007462 3.5e-32 142.9 202 49.5
FAN09G3006 Fragaria x ananassa HOM05D006071 ORTHO05D007462 4.5e-32 142.5 246 45.1
Gorai.011G088400 Gossypium raimondii HOM05D006071 ORTHO05D007462 5.9e-32 142.1 234 45.3
Nn4g22141 Nelumbo nucifera HOM05D006071 ORTHO05D007462 5.9e-32 142.1 198 49.5
MD17G1007100 Malus domestica HOM05D006071 ORTHO05D007462 1.0e-31 141.4 217 46.5
Glyma.19G103000 Glycine max HOM05D006071 ORTHO05D007462 2.9e-31 139.8 219 45.2
Sc07g0003750 Simmondsia chinensis HOM05D006071 ORTHO05D007462 2.9e-31 139.8 201 47.8
Aqoxy5G03151 Aquilegia oxysepala HOM05D006071 ORTHO05D007462 3.8e-31 139.4 202 45.5
Lalb_Chr24g0403151 Lupinus albus HOM05D006071 ORTHO05D007462 5.0e-31 139.0 246 47.2
Prupe.3G313200 Prunus persica HOM05D006071 ORTHO05D007462 5.0e-31 139.0 209 46.4
SGA_v2.0_scaffold47G17632 Striga asiatica HOM05D006071 ORTHO05D007462 6.5e-31 138.7 241 45.6
TAR629G1421 Trochodendron aralioides HOM05D006071 ORTHO05D007462 8.5e-31 138.3 253 42.7
arahy.Tifrunner.gnm1.ann1.FR25D6 Arachis hypogaea HOM05D006071 ORTHO05D007462 1.1e-30 137.9 263 44.1
arahy.Tifrunner.gnm1.ann1.FMKW1Y Arachis hypogaea HOM05D006071 ORTHO05D007462 1.5e-30 137.5 263 43.7
Ca_08138_v3 Cicer arietinum L. HOM05D006071 ORTHO05D007462 1.5e-30 137.5 213 46.5
FAN14G4217 Fragaria x ananassa HOM05D006071 ORTHO05D007462 1.9e-30 137.1 244 43.9
MSTRG.15572 Avicennia marina HOM05D006071 ORTHO05D007462 5.5e-30 135.6 245 43.7
Zm00001eb242020 Zea mays HOM05D006071 ORTHO05D007462 7.2e-30 135.2 105 65.7
CSS0001742 Camellia sinensis var. sinensis HOM05D006071 ORTHO05D007462 1.6e-29 134.0 95 67.4
ATR0582G122 Amborella trichopoda HOM05D006071 ORTHO05D007462 2.1e-29 133.7 254 40.9
MBI07_g41894_MAGBIO Magnolia biondii HOM05D006071 ORTHO05D007462 3.6e-29 132.9 164 50.0
Cc07_g01250 Coffea canephora HOM05D006071 ORTHO05D007462 4.7e-29 132.5 261 42.1
Glyma.16G048700 Glycine max HOM05D006071 ORTHO05D007462 6.1e-29 132.1 142 52.1
BcaB07g30217 Brassica carinata HOM05D006071 ORTHO05D007462 8.0e-29 131.7 148 47.3
MD09G1003000 Malus domestica HOM05D006071 ORTHO05D007462 8.0e-29 131.7 264 42.4
Gohir.A10G070000 Gossypium hirsutum HOM05D006071 ORTHO05D007462 1.8e-28 130.6 232 44.0
AL5G15580 Arabidopsis lyrata HOM05D006071 ORTHO05D007462 2.3e-28 130.2 103 60.2
Oeu003415.3 Olea europaea HOM05D006071 ORTHO05D007462 2.3e-28 130.2 247 44.1
Sp2g15850 Schrenkiella parvula HOM05D006071 ORTHO05D007462 5.2e-28 129.0 253 40.3
AUR62037834 Chenopodium quinoa HOM05D006071 ORTHO05D007462 6.8e-28 128.6 109 63.3
Lj1g0026027 Lotus japonicus HOM05D006071 ORTHO05D007462 6.8e-28 128.6 213 44.6
THA.LOC104805300 Tarenaya hassleriana HOM05D006071 ORTHO05D007462 8.8e-28 128.3 244 43.0
CDE05G0431 Ceratophyllum demersum HOM05D000877 ORTHO05D001509 2.0e-27 127.1 113 53.1
CSS0035612 Camellia sinensis var. sinensis HOM05D006071 ORTHO05D007462 4.4e-27 125.9 157 47.8
Sabra14G0109500 Salix brachista HOM05D006071 ORTHO05D007462 4.4e-27 125.9 243 42.0
BolC2t11398H Brassica oleracea HOM05D006071 ORTHO05D007462 9.7e-27 124.8 247 40.1
Aa31LG2G5830 Aethionema arabicum HOM05D006071 ORTHO05D007462 2.2e-26 123.6 253 41.9
AUR62041072 Chenopodium quinoa HOM05D006071 ORTHO05D007462 2.2e-26 123.6 250 41.2
BcaC03g17381 Brassica carinata HOM05D006071 ORTHO05D007462 2.8e-26 123.2 250 38.8
C02p53260 Brassica napus HOM05D006071 ORTHO05D007462 2.8e-26 123.2 250 38.8
CARHR147750 Cardamine hirsuta HOM05D006071 ORTHO05D007462 3.7e-26 122.9 258 39.5
Atru.chr6.2690 Acer truncatum HOM05D006071 ORTHO05D007462 4.8e-26 122.5 201 49.3
Os02g0516600 Oryza sativa ssp. japonica HOM05D006071 ORTHO05D007462 4.8e-26 122.5 161 45.3
Thhalv10003691m.g Eutrema salsugineum HOM05D006071 ORTHO05D007462 1.4e-25 120.9 245 39.6
BraA02t08478Z Brassica rapa HOM05D006071 ORTHO05D007462 7.0e-25 118.6 252 38.1
A02p34700 Brassica napus HOM05D006071 ORTHO05D007462 2.0e-24 117.1 253 37.2
AT3G26730 Arabidopsis thaliana HOM05D006071 ORTHO05D007462 2.7e-24 116.7 246 38.2
SHI11389 Sapria himalayana HOM05D006071 ORTHO05D007462 1.0e-23 114.8 187 43.9
Eucgr.I01601 Eucalyptus grandis HOM05D006071 ORTHO05D007462 1.7e-23 114.0 241 40.2
Carub.0005s0473 Capsella rubella HOM05D006071 ORTHO05D007462 2.5e-22 110.2 257 37.4
HPP92_024403 Vanilla planifolia HOM05D006071 ORTHO05D007462 7.2e-22 108.6 218 40.4
CiPaw.03G002300 Carya illinoinensis HOM05D006071 ORTHO05D007462 1.6e-21 107.5 82 65.9
unitig_0.g2406 Utricularia gibba HOM05D006071 ORTHO05D007462 5.2e-20 102.4 244 38.9
Mapoly0006s0082 Marchantia polymorpha HOM05D006071 ORTHO05D007462 2.6e-19 100.1 213 37.6
COL.COLO4_13369 Corchorus olitorius HOM05D006071 ORTHO05D007462 2.2e-18 97.1 194 41.2
SMO141G0304 Selaginella moellendorffii HOM05D006071 ORTHO05D007462 4.8e-18 95.9 112 47.3
Pp3c20_8910 Physcomitrium patens HOM05D006071 ORTHO05D007462 7.7e-16 88.6 241 32.8
FAN02G4165 Fragaria x ananassa HOM05D006071 ORTHO05D007462 2.9e-15 86.7 66 63.6
SEGI_23511 Sequoiadendron giganteum HOM05D006071 ORTHO05D007462 1.5e-14 84.3 272 31.2
AagrBONN_evm.TU.Sc2ySwM_344.4297 Anthoceros agrestis HOM05D006071 ORTHO05D007462 3.3e-14 83.2 156 36.5
CBR_g4363 Chara braunii HOM05D006071 ORTHO05D007462 2.0e-11 73.9 91 41.8
MCO15G395 Micromonas commoda HOM05D006071 ORTHO05D007462 5.6e-06 55.8 74 35.1


User provided reference genes

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