Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr17g0550941 Helianthus annuus HOM05D006071 ORTHO05D007462 0.0e+00 1393.6 705 100.0
ECA246G2252 Erigeron canadensis HOM05D006071 ORTHO05D007462 1.0e-288 996.5 727 73.3
Lsat_1_v5_gn_0_22580 Lactuca sativa HOM05D006071 ORTHO05D007462 2.2e-286 988.8 729 72.7
Dinv33279 Davidia involucrata HOM05D006071 ORTHO05D007462 1.4e-229 800.0 778 59.5
Lju41A60G26 Lonicera japonica HOM05D006071 ORTHO05D007462 1.9e-210 736.5 772 56.5
DCAR_014471 Daucus carota HOM05D006071 ORTHO05D007462 4.0e-208 728.8 675 60.9
Rhsim10G0001400 Rhododendron simsii HOM05D006071 ORTHO05D007462 3.4e-207 725.7 754 55.7
Hma1.2p1_0421F.1_g149970 Hydrangea macrophylla HOM05D006071 ORTHO05D007462 1.7e-206 723.4 766 54.8
Thecc.04G047500 Theobroma cacao HOM05D006071 ORTHO05D007462 1.5e-202 710.3 754 55.4
Gohir.D10G081100 Gossypium hirsutum HOM05D006071 ORTHO05D007462 4.0e-200 702.2 746 55.8
vmacro22244 Vaccinium macrocarpon HOM05D006071 ORTHO05D007462 4.0e-200 702.2 714 55.6
Gorai.011G088400 Gossypium raimondii HOM05D006071 ORTHO05D007462 2.2e-198 696.4 746 55.6
Gohir.A10G070000 Gossypium hirsutum HOM05D006071 ORTHO05D007462 7.1e-197 691.4 753 54.7
Manes.11G077000 Manihot esculenta HOM05D006071 ORTHO05D007462 7.9e-196 688.0 744 55.5
CSS0001742 Camellia sinensis var. sinensis HOM05D006071 ORTHO05D007462 8.7e-195 684.5 591 62.3
RcHm_v2.0_Chr2g0176461 Rosa chinensis HOM05D006071 ORTHO05D007462 1.9e-194 683.3 705 54.9
Duzib187G0315 Durio zibethinus HOM05D006071 ORTHO05D007462 3.6e-193 679.1 759 53.8
QL02p069613 Quercus lobata HOM05D006071 ORTHO05D007462 3.6e-193 679.1 766 54.3
TPR.G10339 Trifolium pratense HOM05D006071 ORTHO05D007462 4.8e-193 678.7 757 52.3
Potri.014G145300 Populus trichocarpa HOM05D006071 ORTHO05D007462 8.1e-193 677.9 751 53.3
Cc07_g01250 Coffea canephora HOM05D006071 ORTHO05D007462 1.5e-191 673.7 758 54.1
FAN09G3006 Fragaria x ananassa HOM05D006071 ORTHO05D007462 1.5e-191 673.7 759 51.9
MSTRG.15572 Avicennia marina HOM05D006071 ORTHO05D007462 9.9e-191 671.0 750 53.6
Ciclev10014332m.g Citrus clementina HOM05D006071 ORTHO05D007462 3.8e-190 669.1 803 50.7
Prupe.3G313200 Prunus persica HOM05D006071 ORTHO05D007462 3.8e-190 669.1 769 52.1
Ah.03g136370 Amaranthus hybridus HOM05D006071 ORTHO05D007462 4.9e-190 668.7 746 53.8
Haze_14947 Corylus avellana HOM05D006071 ORTHO05D007462 7.1e-189 664.8 811 51.0
MD17G1007100 Malus domestica HOM05D006071 ORTHO05D007462 6.0e-188 661.8 777 50.8
EL10Ac6g13395 Beta vulgaris HOM05D006071 ORTHO05D007462 5.6e-186 655.2 756 52.6
FAN14G4217 Fragaria x ananassa HOM05D006071 ORTHO05D007462 9.6e-186 654.4 792 50.0
SGA_v2.0_scaffold47G17632 Striga asiatica HOM05D006071 ORTHO05D007462 1.3e-185 654.1 741 53.8
TWI32G0148 Tripterygium wilfordii HOM05D006071 ORTHO05D007462 2.8e-185 652.9 764 53.0
Hund04198 Selenicereus undatus HOM05D006071 ORTHO05D007462 4.8e-185 652.1 756 52.2
GSVIVG01032990001 Vitis vinifera HOM05D006071 ORTHO05D007462 6.2e-185 651.7 750 53.1
ClCG05G012640 Citrullus lanatus HOM05D006071 ORTHO05D007462 8.1e-185 651.4 751 53.3
Nn4g22141 Nelumbo nucifera HOM05D006071 ORTHO05D007462 5.3e-184 648.7 677 55.5
CANSAT64G2805 Cannabis sativa HOM05D006071 ORTHO05D007462 6.9e-184 648.3 771 51.6
Sc07g0003750 Simmondsia chinensis HOM05D006071 ORTHO05D007462 1.2e-183 647.5 742 53.9
MELO3C014817.2 Cucumis melo HOM05D006071 ORTHO05D007462 1.5e-183 647.1 747 51.8
CsaV3_3G027770 Cucumis sativus L. HOM05D006071 ORTHO05D007462 2.9e-182 642.9 754 51.1
Peaxi162Scf00420g00836 Petunia axillaris HOM05D006071 ORTHO05D007462 4.9e-182 642.1 686 54.2
Sed0023591 Sechium edule HOM05D006071 ORTHO05D007462 6.5e-182 641.7 755 52.2
Migut.K01485 Erythranthe guttata HOM05D006071 ORTHO05D007462 8.4e-182 641.3 750 51.6
Medtr7g084020 Medicago truncatula HOM05D006071 ORTHO05D007462 8.4e-182 641.3 756 51.5
Ca_08138_v3 Cicer arietinum L. HOM05D006071 ORTHO05D007462 1.9e-181 640.2 726 51.4
Nitab4.5_0000519g0320 Nicotiana tabacum HOM05D006071 ORTHO05D007462 4.2e-181 639.0 742 52.2
VMungo1383G1903 Vigna mungo HOM05D006071 ORTHO05D007462 5.5e-181 638.6 757 51.3
Lalb_Chr24g0403151 Lupinus albus HOM05D006071 ORTHO05D007462 6.0e-180 635.2 759 51.5
PGR142G0457 Punica granatum HOM05D006071 ORTHO05D007462 7.9e-180 634.8 742 50.8
CiPaw.03G002300 Carya illinoinensis HOM05D006071 ORTHO05D007462 1.0e-179 634.4 603 58.9
AUR62037834 Chenopodium quinoa HOM05D006071 ORTHO05D007462 1.0e-179 634.4 708 52.8
MD09G1003000 Malus domestica HOM05D006071 ORTHO05D007462 1.8e-179 633.6 719 52.3
Nitab4.5_0002172g0120 Nicotiana tabacum HOM05D006071 ORTHO05D007462 1.8e-179 633.6 740 51.5
arahy.Tifrunner.gnm1.ann1.FMKW1Y Arachis hypogaea HOM05D006071 ORTHO05D007462 2.3e-179 633.3 765 50.1
arahy.Tifrunner.gnm1.ann1.FR25D6 Arachis hypogaea HOM05D006071 ORTHO05D007462 1.9e-178 630.2 769 49.8
Phvul.001G084800 Phaseolus vulgaris HOM05D006071 ORTHO05D007462 9.6e-178 627.9 715 52.0
Glyma.19G103000 Glycine max HOM05D006071 ORTHO05D007462 2.8e-177 626.3 725 51.3
Lj1g0026027 Lotus japonicus HOM05D006071 ORTHO05D007462 1.1e-176 624.4 722 52.4
Glyma.16G048700 Glycine max HOM05D006071 ORTHO05D007462 3.1e-176 622.9 655 54.0
PSO478G4855 Papaver somniferum HOM05D006071 ORTHO05D007462 6.9e-176 621.7 768 50.4
Actinidia36244 Actinidia chinensis HOM05D000877 ORTHO05D001509 1.2e-175 620.9 670 53.4
PSO017G0597 Papaver somniferum HOM05D006071 ORTHO05D007462 3.2e-173 612.8 768 49.6
MBI07_g41894_MAGBIO Magnolia biondii HOM05D006071 ORTHO05D007462 1.2e-172 610.9 818 48.4
Sopen02g039190 Solanum pennellii HOM05D006071 ORTHO05D007462 2.1e-172 610.1 637 54.3
FAN02G4165 Fragaria x ananassa HOM05D006071 ORTHO05D007462 3.0e-171 606.3 577 56.7
Aa31LG2G5830 Aethionema arabicum HOM05D006071 ORTHO05D007462 8.7e-171 604.7 770 49.0
Sabra14G0109500 Salix brachista HOM05D006071 ORTHO05D007462 1.1e-170 604.4 709 50.5
TAR629G1421 Trochodendron aralioides HOM05D006071 ORTHO05D007462 5.7e-170 602.1 757 49.9
Hma1.2p1_0421F.1_g149975 Hydrangea macrophylla HOM05D006071 ORTHO05D007462 1.1e-168 597.8 455 64.2
THA.LOC104805300 Tarenaya hassleriana HOM05D006071 ORTHO05D007462 2.4e-168 596.7 754 49.2
Aqoxy5G03151 Aquilegia oxysepala HOM05D006071 ORTHO05D007462 6.9e-168 595.1 732 49.6
FvH4_6g54271 Fragaria vesca HOM05D006071 ORTHO05D007462 6.9e-168 595.1 644 52.6
Oeu003415.3 Olea europaea HOM05D006071 ORTHO05D007462 1.2e-167 594.3 808 47.4
BcaB07g30217 Brassica carinata HOM05D006071 ORTHO05D007462 2.3e-163 580.1 671 50.1
CARHR147750 Cardamine hirsuta HOM05D006071 ORTHO05D007462 2.6e-162 576.6 765 47.1
Sp2g15850 Schrenkiella parvula HOM05D006071 ORTHO05D007462 3.3e-162 576.2 770 47.0
Thhalv10003691m.g Eutrema salsugineum HOM05D006071 ORTHO05D007462 4.4e-162 575.9 764 47.5
Eucgr.I01601 Eucalyptus grandis HOM05D006071 ORTHO05D007462 2.8e-161 573.2 732 48.4
Os02g0516600 Oryza sativa ssp. japonica HOM05D006071 ORTHO05D007462 4.5e-159 565.8 666 50.3
Carub.0005s0473 Capsella rubella HOM05D006071 ORTHO05D007462 1.0e-158 564.7 773 46.1
BraA02t08478Z Brassica rapa HOM05D006071 ORTHO05D007462 1.3e-158 564.3 769 46.3
Zm00001eb242020 Zea mays HOM05D006071 ORTHO05D007462 1.3e-158 564.3 638 51.6
AL5G15580 Arabidopsis lyrata HOM05D006071 ORTHO05D007462 1.7e-158 563.9 625 50.9
A02p34700 Brassica napus HOM05D006071 ORTHO05D007462 5.0e-158 562.4 769 46.2
C02p53260 Brassica napus HOM05D006071 ORTHO05D007462 1.6e-156 557.4 759 45.1
AT3G26730 Arabidopsis thaliana HOM05D006071 ORTHO05D007462 2.1e-156 557.0 773 45.4
BolC2t11398H Brassica oleracea HOM05D006071 ORTHO05D007462 3.6e-156 556.2 759 45.6
BcaC03g17381 Brassica carinata HOM05D006071 ORTHO05D007462 1.8e-155 553.9 755 44.9
ATR0582G122 Amborella trichopoda HOM05D006071 ORTHO05D007462 8.8e-155 551.6 781 45.7
CDE05G0431 Ceratophyllum demersum HOM05D000877 ORTHO05D001509 3.2e-149 533.1 618 48.4
HPP92_024403 Vanilla planifolia HOM05D006071 ORTHO05D007462 4.1e-144 516.2 654 48.9
Hma1.2p1_0033F.1_g021090 Hydrangea macrophylla HOM05D006071 ORTHO05D007462 2.6e-130 470.3 556 51.1
unitig_0.g2406 Utricularia gibba HOM05D006071 ORTHO05D007462 1.8e-128 464.2 603 46.8
Atru.chr6.2689 Acer truncatum HOM05D006071 ORTHO05D007462 4.3e-125 453.0 412 58.3
SEGI_23511 Sequoiadendron giganteum HOM05D006071 ORTHO05D007462 7.5e-122 442.2 831 40.7
AUR62041072 Chenopodium quinoa HOM05D006071 ORTHO05D007462 2.0e-119 434.1 532 49.4
Psat3g093480 Pisum sativum HOM05D006071 ORTHO05D007462 8.9e-115 418.7 483 51.3
HanXRQChr17g0550951 Helianthus annuus HOM05D006071 ORTHO05D007462 1.6e-108 397.9 230 88.7
SMO141G0304 Selaginella moellendorffii HOM05D006071 ORTHO05D007462 2.1e-108 397.5 645 41.2
Mapoly0006s0082 Marchantia polymorpha HOM05D006071 ORTHO05D007462 1.7e-105 387.9 703 37.7
COL.COLO4_13369 Corchorus olitorius HOM05D006071 ORTHO05D007462 1.4e-104 384.8 675 40.4
Pp3c20_8910 Physcomitrium patens HOM05D006071 ORTHO05D007462 1.0e-102 378.6 837 34.4
HanXRQChr17g0550971 Helianthus annuus HOM05D006071 ORTHO05D007462 2.2e-97 360.9 189 96.8
CSS0035612 Camellia sinensis var. sinensis HOM05D006071 ORTHO05D007462 7.3e-93 345.9 416 49.0
Duzib147G1044 Durio zibethinus HOM05D006071 ORTHO05D007462 3.6e-92 343.6 586 41.3
SHI11389 Sapria himalayana HOM05D006071 ORTHO05D007462 1.1e-85 322.0 481 41.8
CBR_g4363 Chara braunii HOM05D006071 ORTHO05D007462 7.9e-71 272.7 800 28.9
Solyc02g094510.4 Solanum lycopersicum HOM05D006071 ORTHO05D007462 1.1e-67 262.3 296 51.0
AagrBONN_evm.TU.Sc2ySwM_344.4297 Anthoceros agrestis HOM05D006071 ORTHO05D007462 9.7e-61 239.2 685 29.9
AUR62041071 Chenopodium quinoa HOM05D006071 ORTHO05D007462 1.7e-52 211.8 222 57.2
Psat2g052360 Pisum sativum HOM05D006071 ORTHO05D007462 6.7e-46 189.9 450 34.2
Psat2g087400 Pisum sativum HOM05D006071 ORTHO05D007462 5.7e-45 186.8 318 40.6
CDE05G1324 Ceratophyllum demersum HOM05D006071 ORTHO05D007462 5.0e-41 173.7 237 44.3
MCO15G395 Micromonas commoda HOM05D006071 ORTHO05D007462 1.8e-30 138.7 640 24.4
Atru.chr6.2690 Acer truncatum HOM05D006071 ORTHO05D007462 4.1e-27 127.5 200 50.5
Cre03.g144687 Chlamydomonas reinhardtii HOM05D006071 ORTHO05D007462 2.7e-26 124.8 621 22.5
Psat0s2046g0080 Pisum sativum HOM05D006071 ORTHO05D007462 2.9e-25 121.3 127 54.3
Sc07g0003760 Simmondsia chinensis HOM05D006071 ORTHO05D007462 8.0e-23 113.2 177 41.8
Psat0s2046g0120 Pisum sativum HOM05D006071 ORTHO05D007462 3.5e-18 97.8 94 54.3
Lj1g0013684 Lotus japonicus HOM05D006071 ORTHO05D007462 3.6e-15 87.8 105 48.6
Atru.chr6.2688 Acer truncatum HOM05D006071 ORTHO05D007462 3.0e-14 84.7 93 60.2
Psat2g087520 Pisum sativum HOM05D006071 ORTHO05D007462 2.0e-13 82.0 142 42.3
Actinidia09845 Actinidia chinensis HOM05D006071 ORTHO05D007462 7.5e-13 80.1 94 45.7
CDE05G2071 Ceratophyllum demersum HOM05D006071 ORTHO05D007462 8.6e-09 66.6 110 41.8
Cre16.g681251 Chlamydomonas reinhardtii HOM05D006071 ORTHO05D007462 1.1e-08 66.2 172 25.6
Actinidia09844 Actinidia chinensis HOM05D006071 ORTHO05D007462 3.3e-08 64.7 77 50.6
unitig_0.g2405 Utricularia gibba HOM05D006071 ORTHO05D007462 4.7e-07 60.8 94 43.6


User provided reference genes

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