Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr17g0549011 Helianthus annuus HOM05D007051 ORTHO05D008842 2.5e-120 435.6 246 100.0
Lsat_1_v5_gn_3_2541 Lactuca sativa HOM05D007051 ORTHO05D008842 5.7e-93 344.7 246 74.0
ECA246G0398 Erigeron canadensis HOM05D007051 ORTHO05D008842 3.8e-89 332.0 243 80.7
PGR031G0283 Punica granatum HOM05D007051 ORTHO05D008842 1.5e-77 293.5 244 66.0
CSS0034738 Camellia sinensis var. sinensis HOM05D007051 ORTHO05D008842 4.4e-77 292.0 249 63.1
CSS0029957 Camellia sinensis var. sinensis HOM05D007051 ORTHO05D008842 7.5e-77 291.2 249 62.7
DCAR_006807 Daucus carota HOM05D007051 ORTHO05D008842 1.7e-76 290.0 245 63.3
Manes.01G074700 Manihot esculenta HOM05D007051 ORTHO05D008842 4.8e-76 288.5 243 65.4
CiPaw.12G105800 Carya illinoinensis HOM05D007051 ORTHO05D008842 1.1e-75 287.3 243 63.4
Glyma.11G030400 Glycine max HOM05D007051 ORTHO05D008842 2.4e-75 286.2 243 63.4
Duzib205G0440 Durio zibethinus HOM05D007051 ORTHO05D008842 3.1e-75 285.8 243 62.6
Hma1.2p1_1868F.1_g305950 Hydrangea macrophylla HOM05D007051 ORTHO05D008842 4.1e-75 285.4 246 62.2
QL12p014185 Quercus lobata HOM05D007051 ORTHO05D008842 4.1e-75 285.4 241 61.0
Eucgr.D02017 Eucalyptus grandis HOM05D007051 ORTHO05D008842 2.0e-74 283.1 243 63.0
TWI60G1677 Tripterygium wilfordii HOM05D007051 ORTHO05D008842 2.7e-74 282.7 242 66.1
Prupe.5G077000 Prunus persica HOM05D007051 ORTHO05D008842 1.3e-73 280.4 242 60.3
arahy.Tifrunner.gnm1.ann1.2BY1CI Arachis hypogaea HOM05D007051 ORTHO05D008842 1.7e-73 280.0 242 62.0
Actinidia27438 Actinidia chinensis HOM05D007051 ORTHO05D008842 3.8e-73 278.9 211 67.8
MD04G1081100 Malus domestica HOM05D007051 ORTHO05D008842 6.5e-73 278.1 243 60.1
Gorai.007G021000 Gossypium raimondii HOM05D007051 ORTHO05D008842 8.5e-73 277.7 243 61.7
ClCG01G003730 Citrullus lanatus HOM05D007051 ORTHO05D008842 1.1e-72 277.3 242 61.6
Gohir.A11G020000 Gossypium hirsutum HOM05D007051 ORTHO05D008842 1.1e-72 277.3 243 61.3
arahy.Tifrunner.gnm1.ann1.BK8PZK Arachis hypogaea HOM05D007051 ORTHO05D008842 1.5e-72 276.9 242 61.6
Ciclev10021945m.g Citrus clementina HOM05D007051 ORTHO05D008842 1.5e-72 276.9 242 62.8
MELO3C005568.2 Cucumis melo HOM05D007051 ORTHO05D008842 1.5e-72 276.9 242 62.8
GSVIVG01006029001 Vitis vinifera HOM05D007051 ORTHO05D008842 1.5e-72 276.9 237 62.4
Cc08_g13070 Coffea canephora HOM05D007051 ORTHO05D008842 1.9e-72 276.6 216 66.2
Dinv21586 Davidia involucrata HOM05D007051 ORTHO05D008842 1.9e-72 276.6 249 60.2
Atru.chr9.1399 Acer truncatum HOM05D007051 ORTHO05D008842 2.5e-72 276.2 243 61.3
Gohir.D11G019700 Gossypium hirsutum HOM05D007051 ORTHO05D008842 2.5e-72 276.2 241 61.4
CANSAT21G0170 Cannabis sativa HOM05D007051 ORTHO05D008842 3.2e-72 275.8 242 62.8
VMungo1215G1548 Vigna mungo HOM05D007051 ORTHO05D008842 3.2e-72 275.8 244 65.6
FAN04G1713 Fragaria x ananassa HOM05D007051 ORTHO05D008842 4.2e-72 275.4 242 59.5
Lj2g0024450 Lotus japonicus HOM05D007051 ORTHO05D008842 4.2e-72 275.4 243 61.3
FAN08G0417 Fragaria x ananassa HOM05D007051 ORTHO05D008842 1.2e-71 273.9 242 59.1
FAN18G1307 Fragaria x ananassa HOM05D007051 ORTHO05D008842 1.2e-71 273.9 242 59.1
SGA_v2.0_scaffold120G32840 Striga asiatica HOM05D007051 ORTHO05D008842 1.6e-71 273.5 246 60.6
Phvul.002G060700 Phaseolus vulgaris HOM05D007051 ORTHO05D008842 2.1e-71 273.1 244 65.6
Ca_06694_v3 Cicer arietinum L. HOM05D007051 ORTHO05D008842 3.6e-71 272.3 243 61.7
TAR629G3399 Trochodendron aralioides HOM05D007051 ORTHO05D008842 3.6e-71 272.3 229 62.9
CsaV3_5G003870 Cucumis sativus L. HOM05D007051 ORTHO05D008842 1.4e-70 270.4 242 61.2
FAN13G2377 Fragaria x ananassa HOM05D007051 ORTHO05D008842 1.4e-70 270.4 251 57.8
Migut.A00866 Erythranthe guttata HOM05D007051 ORTHO05D008842 1.8e-70 270.0 238 59.2
Hund11573 Selenicereus undatus HOM05D007051 ORTHO05D008842 1.8e-70 270.0 246 63.0
vmacro14055 Vaccinium macrocarpon HOM05D007051 ORTHO05D008842 3.0e-70 269.2 208 66.8
ATR0665G189 Amborella trichopoda HOM05D007051 ORTHO05D008842 8.8e-70 267.7 215 62.8
Potri.001G119100 Populus trichocarpa HOM05D007051 ORTHO05D008842 2.6e-69 266.2 227 63.0
Sc01g0009270 Simmondsia chinensis HOM05D007051 ORTHO05D008842 2.6e-69 266.2 216 63.4
Medtr5g011990 Medicago truncatula HOM05D007051 ORTHO05D008842 3.4e-69 265.8 253 60.5
unitig_699.g19761 Utricularia gibba HOM05D001703 ORTHO05D007194 4.4e-69 265.4 207 63.8
THA.LOC104809449 Tarenaya hassleriana HOM05D007051 ORTHO05D008842 8.3e-68 261.2 243 58.8
PSO675G3044 Papaver somniferum HOM05D007051 ORTHO05D008842 1.1e-67 260.8 225 60.4
PSO717G0094 Papaver somniferum HOM05D007051 ORTHO05D008842 1.1e-67 260.8 225 60.4
SalBow6G1069 Salvia bowleyana HOM05D007051 ORTHO05D008842 2.4e-67 259.6 227 59.0
Haze_08593 Corylus avellana HOM05D007051 ORTHO05D008842 3.1e-67 259.2 224 60.7
MSTRG.12072 Avicennia marina HOM05D007051 ORTHO05D008842 5.4e-67 258.5 214 63.1
Lalb_Chr09g0324461 Lupinus albus HOM05D007051 ORTHO05D008842 7.0e-67 258.1 238 57.1
Nitab4.5_0004482g0060 Nicotiana tabacum HOM05D007051 ORTHO05D008842 9.2e-67 257.7 250 58.0
CDE02G0603 Ceratophyllum demersum HOM05D007051 ORTHO05D008842 1.2e-66 257.3 238 58.4
Aqoxy7G00687 Aquilegia oxysepala HOM05D007051 ORTHO05D008842 1.6e-66 256.9 214 67.8
Psat2g179120 Pisum sativum HOM05D007051 ORTHO05D008842 1.6e-66 256.9 215 60.5
Sopen08g027680 Solanum pennellii HOM05D007051 ORTHO05D008842 1.6e-66 256.9 247 58.3
Sabra01G0092000 Salix brachista HOM05D007051 ORTHO05D008842 2.0e-66 256.5 232 59.5
Solyc08g079240.4 Solanum lycopersicum HOM05D007051 ORTHO05D008842 2.7e-66 256.1 247 58.3
RcHm_v2.0_Chr7g0202061 Rosa chinensis HOM05D007051 ORTHO05D008842 5.9e-66 255.0 242 55.4
Sed0010491 Sechium edule HOM05D007051 ORTHO05D008842 7.7e-66 254.6 230 60.4
Nitab4.5_0010733g0020 Nicotiana tabacum HOM05D007051 ORTHO05D008842 1.0e-65 254.2 250 57.2
MBI04_g42034_MAGBIO Magnolia biondii HOM05D007051 ORTHO05D008842 1.3e-65 253.8 214 61.7
Aa31LG2G320 Aethionema arabicum HOM05D007051 ORTHO05D008842 1.7e-65 253.4 243 56.0
FvH4_5g00440 Fragaria vesca HOM05D007051 ORTHO05D008842 1.7e-65 253.4 204 63.7
CAN.G1337.17 Capsicum annuum HOM05D007051 ORTHO05D008842 3.8e-65 252.3 247 57.5
Peaxi162Scf00002g00416 Petunia axillaris HOM05D007051 ORTHO05D008842 5.0e-65 251.9 217 59.4
Nn6g34078 Nelumbo nucifera HOM05D007051 ORTHO05D008842 6.6e-65 251.5 208 61.5
AUR62007459 Chenopodium quinoa HOM05D007051 ORTHO05D008842 3.3e-64 249.2 216 62.5
PGSC0003DMG400004734 Solanum tuberosum HOM05D007051 ORTHO05D008842 3.3e-64 249.2 247 57.1
AL2G13010 Arabidopsis lyrata HOM05D007051 ORTHO05D008842 5.6e-64 248.4 243 55.6
AUR62039918 Chenopodium quinoa HOM05D007051 ORTHO05D008842 9.5e-64 247.7 216 62.5
Thhalv10023664m.g Eutrema salsugineum HOM05D007051 ORTHO05D008842 9.5e-64 247.7 243 55.1
BcaB07g31359 Brassica carinata HOM05D007051 ORTHO05D008842 1.2e-63 247.3 243 56.4
Oeu024055.1 Olea europaea HOM05D007051 ORTHO05D008842 1.6e-63 246.9 230 60.4
Sp2g01860 Schrenkiella parvula HOM05D007051 ORTHO05D008842 2.1e-63 246.5 243 56.0
AT1G62780 Arabidopsis thaliana HOM05D007051 ORTHO05D008842 2.8e-63 246.1 243 53.9
C09p19230 Brassica napus HOM05D007051 ORTHO05D008842 4.7e-63 245.4 243 56.0
BcaC04g22447 Brassica carinata HOM05D007051 ORTHO05D008842 1.0e-62 244.2 243 55.6
A09p15970 Brassica napus HOM05D007051 ORTHO05D008842 3.0e-62 242.7 243 56.0
BraA09t37232Z Brassica rapa HOM05D007051 ORTHO05D008842 3.0e-62 242.7 243 56.0
CARHR049060 Cardamine hirsuta HOM05D007051 ORTHO05D008842 3.0e-62 242.7 243 53.5
BolC9t54830H Brassica oleracea HOM05D007051 ORTHO05D008842 6.8e-62 241.5 243 55.6
Os04g0105700 Oryza sativa ssp. japonica HOM05D007051 ORTHO05D008842 9.2e-59 231.1 214 54.2
MBI04_g32270_MAGBIO Magnolia biondii HOM05D007051 ORTHO05D008842 1.6e-58 230.3 233 54.9
Zm00001eb300480 Zea mays HOM05D007051 ORTHO05D008842 7.8e-58 228.0 213 55.4
SEGI_34604 Sequoiadendron giganteum HOM05D007051 ORTHO05D008842 1.3e-57 227.3 215 55.8
Carub.0002s0220 Capsella rubella HOM05D007051 ORTHO05D008842 1.7e-57 226.9 253 49.8
Thecc.03G259200 Theobroma cacao HOM05D007051 ORTHO05D008842 3.0e-57 226.1 192 60.9
HPP92_015062 Vanilla planifolia HOM05D007051 ORTHO05D008842 3.0e-57 226.1 195 60.5
AagrBONN_evm.TU.Sc2ySwM_362.1892 Anthoceros agrestis HOM05D007051 ORTHO05D008842 6.8e-54 214.9 206 58.3
Pp3c10_11840 Physcomitrium patens HOM05D007051 ORTHO05D008842 3.4e-53 212.6 213 50.7
TPR.G820 Trifolium pratense HOM05D007051 ORTHO05D008842 4.6e-50 202.2 246 54.1
Hma1.2p1_1868F.1_g305940 Hydrangea macrophylla HOM05D007051 ORTHO05D008842 3.0e-49 199.5 176 60.2
SMO367G0716 Selaginella moellendorffii HOM05D007051 ORTHO05D008842 2.3e-46 189.9 227 45.4
Glyma.01G211400 Glycine max HOM05D007051 ORTHO05D008842 1.5e-40 170.6 157 63.7
Mapoly0062s0102 Marchantia polymorpha HOM05D007051 ORTHO05D008842 8.1e-39 164.9 234 44.0
Duzib084G0812 Durio zibethinus HOM05D007051 ORTHO05D008842 3.0e-33 146.4 149 54.4
Cre13.g579550 Chlamydomonas reinhardtii HOM05D007051 ORTHO05D008842 4.0e-30 136.0 218 38.1
Hma1.2p1_2244F.1_g317930 Hydrangea macrophylla HOM05D007051 ORTHO05D008842 1.7e-28 130.6 99 68.7
Cpa.g.sc29.111 Carica papaya HOM05D007051 ORTHO05D008842 1.7e-25 120.6 119 55.5
vmacro16051 Vaccinium macrocarpon HOM05D007051 ORTHO05D008842 1.7e-20 104.0 78 67.9
EL10Ac5g12994 Beta vulgaris HOM05D007051 ORTHO05D008842 1.3e-17 94.4 118 44.1
PRCOL_00000809 Prasinoderma coloniale HOM05D007051 ORTHO05D008842 1.1e-16 91.3 210 30.0
MCO02G329 Micromonas commoda HOM05D007051 ORTHO05D008842 2.5e-16 90.1 155 34.8
arahy.Tifrunner.gnm1.ann1.VE7KXP Arachis hypogaea HOM05D007051 ORTHO05D008842 2.2e-12 77.0 64 65.6
Oeu056087.1 Olea europaea HOM05D007051 ORTHO05D008842 1.3e-07 61.2 52 61.5
Glyma.05G077300 Glycine max HOM05D007051 ORTHO05D008842 3.1e-06 56.6 54 55.6


User provided reference genes

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