Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr17g0547951 Helianthus annuus HOM05D001111 ORTHO05D000939 5.9e-186 654.1 332 100.0
Lsat_1_v5_gn_0_13280 Lactuca sativa HOM05D001111 ORTHO05D000939 3.5e-45 186.4 243 51.9
Lsat_1_v5_gn_0_15161 Lactuca sativa HOM05D001111 ORTHO05D000939 1.1e-38 164.9 249 47.8
Lsat_1_v5_gn_0_15001 Lactuca sativa HOM05D001111 ORTHO05D000939 2.1e-37 160.6 249 48.2
HanXRQChr15g0474571 Helianthus annuus HOM05D001111 ORTHO05D000939 5.1e-36 156.0 293 42.3
Lsat_1_v5_gn_0_13361 Lactuca sativa HOM05D001111 ORTHO05D000939 1.1e-35 154.8 262 46.9
Lsat_1_v5_gn_0_14901 Lactuca sativa HOM05D001111 ORTHO05D000939 2.8e-34 150.2 248 47.2
ECA246G4016 Erigeron canadensis HOM05D001111 ORTHO05D000939 5.4e-30 136.0 255 43.9
ECA246G2993 Erigeron canadensis HOM05D001111 ORTHO05D000939 1.5e-24 117.9 246 41.1
ECA246G0343 Erigeron canadensis HOM05D001111 ORTHO05D000939 5.4e-22 109.4 262 37.4
Lsat_1_v5_gn_2_91940 Lactuca sativa HOM05D001111 ORTHO05D000939 2.1e-21 107.5 246 38.2
Lsat_1_v5_gn_4_182581 Lactuca sativa HOM05D001111 ORTHO05D000939 2.1e-21 107.5 267 37.8
CSS0035264 Camellia sinensis var. sinensis HOM05D001111 ORTHO05D000939 3.6e-18 96.7 286 34.3
Rhsim10G0021000 Rhododendron simsii HOM05D001111 ORTHO05D000939 1.1e-17 95.1 273 36.3
CSS0041696 Camellia sinensis var. sinensis HOM05D001111 ORTHO05D000939 1.4e-17 94.7 273 34.1
Lsat_1_v5_gn_0_13340 Lactuca sativa HOM05D001111 ORTHO05D000939 1.8e-17 94.4 219 42.0
Lsat_1_v5_gn_0_15021 Lactuca sativa HOM05D001111 ORTHO05D000939 4.0e-17 93.2 175 45.1
HanXRQChr14g0450341 Helianthus annuus HOM05D001111 ORTHO05D000939 2.0e-16 90.9 219 38.4
Peaxi162Scf00700g00066 Petunia axillaris HOM05D001111 ORTHO05D000939 2.0e-16 90.9 243 34.6
Peaxi162Scf00129g00116 Petunia axillaris HOM05D001111 ORTHO05D000939 2.6e-16 90.5 229 35.8
Dinv00507 Davidia involucrata HOM05D001111 ORTHO05D000939 3.4e-16 90.1 267 32.6
DCAR_021689 Daucus carota HOM05D001111 ORTHO05D000939 5.8e-16 89.4 250 36.0
Oeu043052.2 Olea europaea HOM05D001111 ORTHO05D000939 1.7e-15 87.8 249 34.9
Lsat_1_v5_gn_4_182601 Lactuca sativa HOM05D001111 ORTHO05D000939 2.9e-15 87.0 223 34.5
Peaxi162Scf00700g00061 Petunia axillaris HOM05D001111 ORTHO05D000939 2.9e-15 87.0 236 35.2
MSTRG.15514 Avicennia marina HOM05D001111 ORTHO05D000939 8.4e-15 85.5 254 34.6
Dinv33484 Davidia involucrata HOM05D001111 ORTHO05D000939 1.4e-14 84.7 147 40.1
SalBow1G0495 Salvia bowleyana HOM05D001111 ORTHO05D000939 3.2e-14 83.6 235 34.9
vmacro18253 Vaccinium macrocarpon HOM05D001111 ORTHO05D000939 5.4e-14 82.8 301 33.9
Migut.H00111 Erythranthe guttata HOM05D001111 ORTHO05D000939 7.1e-14 82.4 255 34.1
Peaxi162Scf00700g00062 Petunia axillaris HOM05D001111 ORTHO05D000939 7.1e-14 82.4 237 34.6
Thecc.04G010500 Theobroma cacao HOM05D001111 ORTHO05D000939 7.1e-14 82.4 262 32.4
Solyc02g086810.1 Solanum lycopersicum HOM05D001111 ORTHO05D000939 1.2e-13 81.6 275 32.4
Lju41C35T12 Lonicera japonica HOM05D001111 ORTHO05D000939 2.1e-13 80.9 254 35.4
Nitab4.5_0007208g0010 Nicotiana tabacum HOM05D001111 ORTHO05D000939 3.5e-13 80.1 256 35.2
Oeu048646.1 Olea europaea HOM05D001111 ORTHO05D000939 1.0e-12 78.6 186 37.6
PGSC0003DMG400000492 Solanum tuberosum HOM05D001111 ORTHO05D000939 1.0e-12 78.6 277 31.8
Atru.chr6.2310 Acer truncatum HOM05D001111 ORTHO05D000939 1.3e-12 78.2 239 34.7
Nitab4.5_0006281g0050 Nicotiana tabacum HOM05D001111 ORTHO05D000939 2.3e-12 77.4 280 33.6
Oeu037698.1 Olea europaea HOM05D001111 ORTHO05D000939 2.3e-12 77.4 148 42.6
VMungo1383G2935 Vigna mungo HOM05D001111 ORTHO05D000939 2.3e-12 77.4 83 54.2
Sopen02g031580 Solanum pennellii HOM05D001111 ORTHO05D000939 3.0e-12 77.0 272 32.4
PGR142G1453 Punica granatum HOM05D001111 ORTHO05D000939 3.9e-12 76.6 121 41.3
CAN.G464.40 Capsicum annuum HOM05D001111 ORTHO05D000939 5.1e-12 76.3 118 44.1
CAN.G4822.1 Capsicum annuum HOM05D001111 ORTHO05D000939 5.1e-12 76.3 118 44.1
Lj7P592T34 Lonicera japonica HOM05D001111 ORTHO05D000939 5.1e-12 76.3 150 44.0
Nitab4.5_0004348g0010 Nicotiana tabacum HOM05D001111 ORTHO05D000939 6.7e-12 75.9 258 34.5
Peaxi162Scf00700g00055 Petunia axillaris HOM05D001111 ORTHO05D000939 6.7e-12 75.9 131 41.2
SalBow7G3341 Salvia bowleyana HOM05D001111 ORTHO05D000939 6.7e-12 75.9 245 34.3
Dinv35071 Davidia involucrata HOM05D005823 ORTHO05D007536 8.7e-12 75.5 159 36.5
CAN.G464.41 Capsicum annuum HOM05D001111 ORTHO05D000939 1.1e-11 75.1 117 43.6
Oeu037699.1 Olea europaea HOM05D001111 ORTHO05D000939 1.1e-11 75.1 148 41.9
Oeu062983.1 Olea europaea HOM05D001111 ORTHO05D000939 1.5e-11 74.7 158 41.1
GSVIVG01032463001 Vitis vinifera HOM05D001111 ORTHO05D000939 1.5e-11 74.7 120 40.0
MSTRG.3168 Avicennia marina HOM05D001111 ORTHO05D000939 1.9e-11 74.3 175 34.9
SGA_v2.0_scaffold135G34879 Striga asiatica HOM05D001111 ORTHO05D000939 1.9e-11 74.3 221 34.4
TWI36G0293 Tripterygium wilfordii HOM05D001111 ORTHO05D000939 1.9e-11 74.3 98 46.9
TAR629G2362 Trochodendron aralioides HOM05D001111 ORTHO05D000939 1.9e-11 74.3 331 28.4
Gohir.D10G087500 Gossypium hirsutum HOM05D001111 ORTHO05D000939 3.3e-11 73.6 252 31.3
Gorai.011G095800 Gossypium raimondii HOM05D001111 ORTHO05D000939 3.3e-11 73.6 252 31.3
CANSAT64G1643 Cannabis sativa HOM05D001111 ORTHO05D000939 4.3e-11 73.2 395 26.1
CAN.G206.25 Capsicum annuum HOM05D001111 ORTHO05D000939 4.3e-11 73.2 175 36.0
Aqoxy3G02945 Aquilegia oxysepala HOM05D001111 ORTHO05D000939 5.6e-11 72.8 284 29.6
Phvul.008G155400 Phaseolus vulgaris HOM05D001111 ORTHO05D000939 5.6e-11 72.8 71 57.7
SGA_v2.0_scaffold224G42977 Striga asiatica HOM05D001111 ORTHO05D000939 5.6e-11 72.8 216 34.3
MELO3C002262.2 Cucumis melo HOM05D001111 ORTHO05D000939 9.6e-11 72.0 160 36.2
PGSC0003DMG400030091 Solanum tuberosum HOM05D001111 ORTHO05D000939 9.6e-11 72.0 132 36.4
Duzib264G1045 Durio zibethinus HOM05D001111 ORTHO05D000939 1.6e-10 71.2 241 30.7
Actinidia35745 Actinidia chinensis HOM05D001111 ORTHO05D000939 2.1e-10 70.9 111 43.2
Dinv20655 Davidia involucrata HOM05D001111 ORTHO05D000939 2.1e-10 70.9 92 45.7
Duzib187G0831 Durio zibethinus HOM05D001111 ORTHO05D000939 2.1e-10 70.9 364 25.0
Glyma.16G073400 Glycine max HOM05D001111 ORTHO05D000939 2.1e-10 70.9 79 54.4
Gohir.D07G227700 Gossypium hirsutum HOM05D001111 ORTHO05D000939 2.1e-10 70.9 232 34.9
MSTRG.24021 Avicennia marina HOM05D001111 ORTHO05D000939 2.8e-10 70.5 245 31.8
CAN.G781.10 Capsicum annuum HOM05D001111 ORTHO05D000939 2.8e-10 70.5 90 50.0
ClCG01G013130 Citrullus lanatus HOM05D001111 ORTHO05D000939 2.8e-10 70.5 181 33.1
Glyma.19G065000 Glycine max HOM05D001111 ORTHO05D000939 2.8e-10 70.5 75 58.7
Nn4g22768 Nelumbo nucifera HOM05D001111 ORTHO05D000939 2.8e-10 70.5 94 53.2
Sed0027867 Sechium edule HOM05D001111 ORTHO05D000939 3.7e-10 70.1 72 54.2
VMungo0464G0972 Vigna mungo HOM05D001111 ORTHO05D000939 3.7e-10 70.1 111 43.2
Thhalv10004779m.g Eutrema salsugineum HOM05D001111 ORTHO05D000939 4.8e-10 69.7 112 42.0
Nitab4.5_0001017g0090 Nicotiana tabacum HOM05D001111 ORTHO05D000939 4.8e-10 69.7 90 46.7
Gorai.001G262600 Gossypium raimondii HOM05D001111 ORTHO05D000939 6.2e-10 69.3 232 34.1
TWI56G0447 Tripterygium wilfordii HOM05D001111 ORTHO05D000939 6.2e-10 69.3 192 33.3
Peaxi162Scf00017g00246 Petunia axillaris HOM05D000306 ORTHO05D016879 8.1e-10 68.9 202 34.7
CSS0041124 Camellia sinensis var. sinensis HOM05D001111 ORTHO05D000939 1.1e-09 68.6 95 46.3
Glyma.19G007600 Glycine max HOM05D001111 ORTHO05D000939 1.1e-09 68.6 139 37.4
TAR622G0132 Trochodendron aralioides HOM05D001111 ORTHO05D000939 1.1e-09 68.6 153 34.0
ECA232G3488 Erigeron canadensis HOM05D001111 ORTHO05D000939 1.8e-09 67.8 268 30.2
Gohir.A10G103400 Gossypium hirsutum HOM05D001111 ORTHO05D000939 1.8e-09 67.8 252 30.6
Oeu062980.1 Olea europaea HOM05D001111 ORTHO05D000939 1.8e-09 67.8 134 35.8
PGSC0003DMG400030093 Solanum tuberosum HOM05D001111 ORTHO05D000939 1.8e-09 67.8 120 42.5
TAR371G1086 Trochodendron aralioides HOM05D001111 ORTHO05D000939 1.8e-09 67.8 76 55.3
Gohir.A07G221000 Gossypium hirsutum HOM05D001111 ORTHO05D000939 2.4e-09 67.4 236 31.8
Nitab4.5_0007719g0040 Nicotiana tabacum HOM05D001111 ORTHO05D000939 2.4e-09 67.4 99 42.4
Phvul.004G013400 Phaseolus vulgaris HOM05D001111 ORTHO05D000939 2.4e-09 67.4 179 33.5
Sabra15G0101500 Salix brachista HOM05D001111 ORTHO05D000939 2.4e-09 67.4 96 44.8
CsaV3_1G008460 Cucumis sativus L. HOM05D001111 ORTHO05D000939 3.1e-09 67.0 140 35.7
HanXRQChr09g0272191 Helianthus annuus HOM05D001111 ORTHO05D000939 3.1e-09 67.0 76 52.6
Sc07g0003050 Simmondsia chinensis HOM05D001111 ORTHO05D000939 3.1e-09 67.0 108 39.8
DCAR_026134 Daucus carota HOM05D001111 ORTHO05D000939 4.0e-09 66.6 129 41.9
Lj9P449T21 Lonicera japonica HOM05D001111 ORTHO05D000939 4.0e-09 66.6 96 45.8
PGSC0003DMG400024504 Solanum tuberosum HOM05D001111 ORTHO05D000939 4.0e-09 66.6 141 34.8
vmacro18254 Vaccinium macrocarpon HOM05D001111 ORTHO05D000939 4.0e-09 66.6 253 34.8
Manes.06G104800 Manihot esculenta HOM05D001111 ORTHO05D000939 5.3e-09 66.2 112 38.4
Potri.015G076400 Populus trichocarpa HOM05D001111 ORTHO05D000939 5.3e-09 66.2 90 45.6
MSTRG.3297 Avicennia marina HOM05D001111 ORTHO05D000939 6.9e-09 65.9 132 35.6
CsaV3_5G027360 Cucumis sativus L. HOM05D001111 ORTHO05D000939 6.9e-09 65.9 154 34.4
Sabra12G0057900 Salix brachista HOM05D001111 ORTHO05D000939 6.9e-09 65.9 110 39.1
Sed0001479 Sechium edule HOM05D001111 ORTHO05D000939 6.9e-09 65.9 89 48.3
Solyc03g114350.1 Solanum lycopersicum HOM05D001111 ORTHO05D000939 6.9e-09 65.9 141 34.8
Migut.K01372 Erythranthe guttata HOM05D001111 ORTHO05D000939 9.0e-09 65.5 381 25.2
Manes.14G065800 Manihot esculenta HOM05D001111 ORTHO05D000939 1.2e-08 65.1 172 30.8
Nitab4.5_0009783g0040 Nicotiana tabacum HOM05D001111 ORTHO05D000939 1.2e-08 65.1 99 42.4
PGSC0003DMG400045223 Solanum tuberosum HOM05D001111 ORTHO05D000939 1.2e-08 65.1 95 46.3
Cc07_g02140 Coffea canephora HOM05D001111 ORTHO05D000939 1.5e-08 64.7 175 31.4
Oeu040830.1 Olea europaea HOM05D001111 ORTHO05D000939 1.5e-08 64.7 95 44.2
Oeu040831.1 Olea europaea HOM05D001111 ORTHO05D000939 1.5e-08 64.7 95 44.2
SGA_v2.0_scaffold205G41690 Striga asiatica HOM05D001111 ORTHO05D000939 1.5e-08 64.7 247 33.6
Duzib147G1636 Durio zibethinus HOM05D001111 ORTHO05D000939 2.0e-08 64.3 257 29.2
Lsat_1_v5_gn_8_82121 Lactuca sativa HOM05D001111 ORTHO05D000939 2.0e-08 64.3 133 39.8
Manes.15G167300 Manihot esculenta HOM05D001111 ORTHO05D000939 2.0e-08 64.3 114 39.5
QL10p011670 Quercus lobata HOM05D001111 ORTHO05D000939 2.0e-08 64.3 76 48.7
Sopen03g033450 Solanum pennellii HOM05D001111 ORTHO05D000939 2.0e-08 64.3 99 44.4
Manes.17G116400 Manihot esculenta HOM05D001111 ORTHO05D000939 2.6e-08 63.9 109 42.2
Lj5P124T59 Lonicera japonica HOM05D001111 ORTHO05D000939 3.4e-08 63.5 120 39.2
Potri.012G081000 Populus trichocarpa HOM05D001111 ORTHO05D000939 3.4e-08 63.5 76 48.7
RcHm_v2.0_Chr2g0172191 Rosa chinensis HOM05D001111 ORTHO05D000939 3.4e-08 63.5 247 31.2
Thhalv10027885m.g Eutrema salsugineum HOM05D001111 ORTHO05D000939 4.5e-08 63.2 142 37.3
SalBow2G0497 Salvia bowleyana HOM05D001111 ORTHO05D000939 4.5e-08 63.2 150 36.0
AL5G17370 Arabidopsis lyrata HOM05D001111 ORTHO05D000939 5.8e-08 62.8 96 43.8
vmacro18255 Vaccinium macrocarpon HOM05D001111 ORTHO05D000939 7.6e-08 62.4 145 37.9
CiPaw.11G026300 Carya illinoinensis HOM05D001111 ORTHO05D000939 9.9e-08 62.0 78 52.6
FvH4_6g50800 Fragaria vesca HOM05D001111 ORTHO05D000939 9.9e-08 62.0 174 33.3
TWI39G0739 Tripterygium wilfordii HOM05D001111 ORTHO05D000939 9.9e-08 62.0 166 31.9
Actinidia33068 Actinidia chinensis HOM05D001111 ORTHO05D000939 1.3e-07 61.6 79 48.1
CDE06G1645 Ceratophyllum demersum HOM05D000875 ORTHO05D000939 1.3e-07 61.6 123 38.2
FAN14G5221 Fragaria x ananassa HOM05D001111 ORTHO05D000939 1.3e-07 61.6 174 33.3
THA.LOC104825335 Tarenaya hassleriana HOM05D001111 ORTHO05D000939 1.3e-07 61.6 116 40.5
Psat1g057280 Pisum sativum HOM05D001111 ORTHO05D000939 1.7e-07 61.2 68 51.5
SGA_v2.0_scaffold30G12462 Striga asiatica HOM05D001111 ORTHO05D000939 1.7e-07 61.2 227 32.6
COL.COLO4_30037 Corchorus olitorius HOM05D001111 ORTHO05D000939 2.2e-07 60.8 109 40.4
Lsat_1_v5_gn_5_14521 Lactuca sativa HOM05D001111 ORTHO05D000939 2.2e-07 60.8 162 32.7
Oeu060136.1 Olea europaea HOM05D001111 ORTHO05D000939 2.2e-07 60.8 86 46.5
CARHR149390 Cardamine hirsuta HOM05D001111 ORTHO05D000939 3.8e-07 60.1 253 28.9
CDE06G0264 Ceratophyllum demersum HOM05D001111 ORTHO05D000939 3.8e-07 60.1 65 53.8
Duzib205G1255 Durio zibethinus HOM05D001111 ORTHO05D000939 3.8e-07 60.1 105 41.0
Atru.chr9.2477 Acer truncatum HOM05D001111 ORTHO05D000939 4.9e-07 59.7 120 38.3
CAN.G628.80 Capsicum annuum HOM05D001111 ORTHO05D000939 4.9e-07 59.7 94 43.6
Cpa.g.sc76.61 Carica papaya HOM05D001111 ORTHO05D000939 4.9e-07 59.7 157 40.1
Ciclev10021025m.g Citrus clementina HOM05D001111 ORTHO05D000939 4.9e-07 59.7 82 46.3
HanXRQChr07g0198761 Helianthus annuus HOM05D001111 ORTHO05D000939 4.9e-07 59.7 92 44.6
Lalb_Chr06g0176001 Lupinus albus HOM05D001111 ORTHO05D000939 4.9e-07 59.7 191 29.3
MBI16_g32208_MAGBIO Magnolia biondii HOM05D001111 ORTHO05D000939 4.9e-07 59.7 195 33.3
Migut.I00012 Erythranthe guttata HOM05D001111 ORTHO05D000939 6.4e-07 59.3 95 45.3
QL03p060170 Quercus lobata HOM05D001111 ORTHO05D000939 6.4e-07 59.3 97 43.3
Lsat_1_v5_gn_4_10481 Lactuca sativa HOM05D001111 ORTHO05D000939 8.4e-07 58.9 101 44.6
TWI31G0459 Tripterygium wilfordii HOM05D001111 ORTHO05D000939 8.4e-07 58.9 128 40.6
CDE07G0471 Ceratophyllum demersum HOM05D001111 ORTHO05D000939 1.1e-06 58.5 65 52.3
MD09G1032200 Malus domestica HOM05D001111 ORTHO05D000939 1.1e-06 58.5 76 51.3
Oeu022162.1 Olea europaea HOM05D001111 ORTHO05D000939 1.1e-06 58.5 89 44.9
Peaxi162Scf00017g02910 Petunia axillaris HOM05D001111 ORTHO05D000939 1.1e-06 58.5 94 42.6
Sed0011422 Sechium edule HOM05D001111 ORTHO05D000939 1.1e-06 58.5 245 31.8
Aqoxy3G01035 Aquilegia oxysepala HOM05D001111 ORTHO05D000939 1.4e-06 58.2 240 28.3
BcaB07g30140 Brassica carinata HOM05D001111 ORTHO05D000939 1.4e-06 58.2 134 34.3
CiPaw.12G026500 Carya illinoinensis HOM05D001111 ORTHO05D000939 1.4e-06 58.2 86 45.3
FAN02G0682 Fragaria x ananassa HOM05D001111 ORTHO05D000939 1.9e-06 57.8 174 32.2
MBI10_g14555_MAGBIO Magnolia biondii HOM05D001111 ORTHO05D000939 1.9e-06 57.8 144 32.6
BcaC06g30955 Brassica carinata HOM05D001111 ORTHO05D000939 2.5e-06 57.4 110 38.2
A06p40830 Brassica napus HOM05D001111 ORTHO05D000939 2.5e-06 57.4 107 37.4
BraA06t27004Z Brassica rapa HOM05D001111 ORTHO05D000939 2.5e-06 57.4 107 37.4
CDE02G3744 Ceratophyllum demersum HOM05D001111 ORTHO05D000939 2.5e-06 57.4 76 46.1
SalBow5G0542 Salvia bowleyana HOM05D001111 ORTHO05D000939 2.5e-06 57.4 74 45.9
SalBow5G1950 Salvia bowleyana HOM05D001111 ORTHO05D000939 2.5e-06 57.4 74 45.9
Medtr6g006950 Medicago truncatula HOM05D001111 ORTHO05D000939 4.2e-06 56.6 90 45.6
Thecc.03G012600 Theobroma cacao HOM05D001111 ORTHO05D000939 4.2e-06 56.6 81 46.9
TWI23G0219 Tripterygium wilfordii HOM05D001111 ORTHO05D000939 4.2e-06 56.6 245 29.0
ECA246G3140 Erigeron canadensis HOM05D001111 ORTHO05D000939 5.5e-06 56.2 75 45.3
Potri.008G156901 Populus trichocarpa HOM05D001111 ORTHO05D000939 5.5e-06 56.2 83 41.0
VMungo0251G0973 Vigna mungo HOM05D001111 ORTHO05D000939 5.5e-06 56.2 140 31.4
FAN05G2415 Fragaria x ananassa HOM05D001111 ORTHO05D000939 7.1e-06 55.8 251 33.1
Lj1g0001602 Lotus japonicus HOM05D001111 ORTHO05D000939 7.1e-06 55.8 215 28.8
Lalb_Chr10g0093891 Lupinus albus HOM05D001111 ORTHO05D000939 7.1e-06 55.8 120 41.7
MSTRG.23129 Avicennia marina HOM05D001111 ORTHO05D000939 9.3e-06 55.5 105 40.0
CDE04G3478 Ceratophyllum demersum HOM05D000875 ORTHO05D000684 9.3e-06 55.5 214 29.9


User provided reference genes

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