Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr17g0547501 Helianthus annuus HOM05D002474 ORTHO05D006727 2.0e-283 978.4 488 100.0
Lsat_1_v5_gn_3_102300 Lactuca sativa HOM05D002474 ORTHO05D006727 3.5e-235 818.1 487 83.8
ECA246G0556 Erigeron canadensis HOM05D002474 ORTHO05D006727 2.5e-233 812.0 491 83.7
Atru.chr8.2476 Acer truncatum HOM05D002474 ORTHO05D006727 1.6e-195 686.4 475 71.8
Migut.K01338 Erythranthe guttata HOM05D002474 ORTHO05D006727 6.0e-195 684.5 491 69.2
Nn4g23008 Nelumbo nucifera HOM05D002474 ORTHO05D006727 1.1e-193 680.2 487 69.2
Solyc02g067480.3 Solanum lycopersicum HOM05D002474 ORTHO05D006727 2.5e-193 679.1 476 71.4
Sopen02g016630 Solanum pennellii HOM05D002474 ORTHO05D006727 1.3e-192 676.8 476 71.4
Nitab4.5_0006062g0010 Nicotiana tabacum HOM05D002474 ORTHO05D006727 4.0e-191 671.8 477 70.0
PGSC0003DMG400006940 Solanum tuberosum HOM05D002474 ORTHO05D006727 9.0e-191 670.6 476 70.8
CSS0021046 Camellia sinensis var. sinensis HOM05D002474 ORTHO05D006727 2.0e-190 669.5 419 77.1
QL02p080225 Quercus lobata HOM05D002474 ORTHO05D006727 2.0e-190 669.5 475 69.1
Oeu033341.3 Olea europaea HOM05D002474 ORTHO05D006727 4.5e-190 668.3 516 65.9
Hma1.2p1_0449F.1_g154950 Hydrangea macrophylla HOM05D002474 ORTHO05D006727 5.8e-190 667.9 430 75.1
CAN.G1128.5 Capsicum annuum HOM05D002474 ORTHO05D006727 1.3e-189 666.8 476 69.5
Gorai.013G255100 Gossypium raimondii HOM05D002474 ORTHO05D006727 3.2e-188 662.1 480 69.6
Thecc.09G254500 Theobroma cacao HOM05D002474 ORTHO05D006727 3.5e-187 658.7 482 67.4
Nitab4.5_0002699g0040 Nicotiana tabacum HOM05D002474 ORTHO05D006727 3.0e-186 655.6 462 70.8
PSO478G4089 Papaver somniferum HOM05D002474 ORTHO05D006727 3.0e-186 655.6 430 74.2
Gohir.A13G220300 Gossypium hirsutum HOM05D002474 ORTHO05D006727 6.7e-186 654.4 480 69.0
Eucgr.J02138 Eucalyptus grandis HOM05D002474 ORTHO05D006727 1.3e-184 650.2 479 66.8
FvH4_6g49390 Fragaria vesca HOM05D002474 ORTHO05D006727 1.6e-184 649.8 482 66.2
MELO3C021965.2 Cucumis melo HOM05D002474 ORTHO05D006727 2.8e-184 649.0 435 72.4
GSVIVG01032597001 Vitis vinifera HOM05D002474 ORTHO05D006727 2.8e-184 649.0 416 75.2
Ciclev10011620m.g Citrus clementina HOM05D002474 ORTHO05D006727 1.1e-183 647.1 477 68.8
CsaV3_5G037800 Cucumis sativus L. HOM05D002474 ORTHO05D006727 1.1e-183 647.1 435 72.2
PSO161G0033 Papaver somniferum HOM05D002474 ORTHO05D006727 5.8e-182 641.3 430 73.0
Phvul.004G025500 Phaseolus vulgaris HOM05D002474 ORTHO05D006727 1.7e-181 639.8 450 68.4
RcHm_v2.0_Chr2g0169251 Rosa chinensis HOM05D002474 ORTHO05D006727 1.7e-181 639.8 479 64.9
Psat1g077640 Pisum sativum HOM05D002474 ORTHO05D006727 2.9e-181 639.0 429 70.9
RhsimUnG0054500 Rhododendron simsii HOM05D002474 ORTHO05D006727 1.1e-180 637.1 499 65.5
Aqoxy3G00804 Aquilegia oxysepala HOM05D002474 ORTHO05D006727 5.5e-180 634.8 418 72.5
Sc11g0006920 Simmondsia chinensis HOM05D002474 ORTHO05D006727 1.2e-179 633.6 446 69.3
THA.LOC104805441 Tarenaya hassleriana HOM05D002474 ORTHO05D006727 4.6e-179 631.7 453 68.0
Gohir.D13G224300 Gossypium hirsutum HOM05D002474 ORTHO05D006727 7.9e-179 630.9 489 66.7
Potri.004G130000 Populus trichocarpa HOM05D002474 ORTHO05D006727 7.9e-179 630.9 466 66.5
SGA_v2.0_scaffold224G42953 Striga asiatica HOM05D002474 ORTHO05D006727 1.0e-178 630.6 437 70.0
unitig_748.g8621 Utricularia gibba HOM05D002474 ORTHO05D006727 1.8e-178 629.8 432 69.9
Nitab4.5_0023901g0010 Nicotiana tabacum HOM05D002474 ORTHO05D006727 3.9e-178 628.6 409 74.3
TPR.G4252 Trifolium pratense HOM05D002474 ORTHO05D006727 6.7e-178 627.9 429 69.2
Medtr6g011270 Medicago truncatula HOM05D002474 ORTHO05D006727 1.1e-177 627.1 452 66.6
Lalb_Chr06g0175531 Lupinus albus HOM05D002474 ORTHO05D006727 5.7e-177 624.8 448 66.3
TAR629G1594 Trochodendron aralioides HOM05D002474 ORTHO05D006727 2.8e-176 622.5 439 70.2
arahy.Tifrunner.gnm1.ann1.B2F8E8 Arachis hypogaea HOM05D002474 ORTHO05D006727 1.4e-175 620.2 467 66.2
Ca_04259_v3 Cicer arietinum L. HOM05D002474 ORTHO05D006727 3.1e-175 619.0 419 70.9
CiPaw.04G020500 Carya illinoinensis HOM05D002474 ORTHO05D006727 9.0e-175 617.5 476 66.2
Carub.0007s3579 Capsella rubella HOM05D002474 ORTHO05D006727 5.9e-174 614.8 431 68.4
Lj2g0026556 Lotus japonicus HOM05D002474 ORTHO05D006727 2.9e-173 612.5 419 70.6
CDE08G1502 Ceratophyllum demersum HOM05D002474 ORTHO05D006727 8.4e-173 610.9 448 65.0
HanXRQChr16g0519921 Helianthus annuus HOM05D002474 ORTHO05D006727 1.4e-172 610.1 329 93.9
COL.COLO4_24935 Corchorus olitorius HOM05D002474 ORTHO05D006727 5.5e-172 608.2 420 71.4
Hund13252 Selenicereus undatus HOM05D002474 ORTHO05D006727 7.2e-172 607.8 520 60.8
CARHR262240 Cardamine hirsuta HOM05D002474 ORTHO05D006727 9.3e-172 607.4 427 69.1
Duzib168G1861 Durio zibethinus HOM05D002474 ORTHO05D006727 1.6e-171 606.7 415 71.8
Cfa007503 Carpinus fangiana HOM05D002474 ORTHO05D006727 1.3e-170 603.6 508 61.6
AL7G50200 Arabidopsis lyrata HOM05D002474 ORTHO05D006727 3.0e-170 602.4 452 65.7
PGR083G0251 Punica granatum HOM05D002474 ORTHO05D006727 1.5e-169 600.1 429 69.2
BraA04t16928Z Brassica rapa HOM05D002474 ORTHO05D006727 4.3e-169 598.6 448 66.1
Haze_14590 Corylus avellana HOM05D002474 ORTHO05D006727 5.7e-169 598.2 476 64.5
Aa31LG9G1670 Aethionema arabicum HOM05D002474 ORTHO05D006727 9.7e-169 597.4 430 68.4
Thhalv10028129m.g Eutrema salsugineum HOM05D002474 ORTHO05D006727 1.1e-167 594.0 451 66.1
Os12g0638800 Oryza sativa ssp. japonica HOM05D002474 ORTHO05D006727 1.4e-167 593.6 450 64.2
AT5G39940 Arabidopsis thaliana HOM05D002474 ORTHO05D006727 6.9e-167 591.3 458 64.8
Ah.12g065360 Amaranthus hybridus HOM05D002474 ORTHO05D006727 4.5e-166 588.6 460 64.8
FAN02G0112 Fragaria x ananassa HOM05D002474 ORTHO05D006727 7.7e-166 587.8 479 61.2
Cpa.g.sc14.49 Carica papaya HOM05D002474 ORTHO05D006727 2.2e-165 586.3 437 67.7
Sabra04G0087600 Salix brachista HOM05D002474 ORTHO05D006727 8.5e-165 584.3 462 64.7
ATR0609G116 Amborella trichopoda HOM05D002474 ORTHO05D006727 1.9e-164 583.2 415 68.4
Zm00001eb033100 Zea mays HOM05D002474 ORTHO05D006727 3.2e-164 582.4 461 62.7
TWI60G0106 Tripterygium wilfordii HOM05D002474 ORTHO05D006727 1.4e-162 577.0 452 64.2
EL10Ac2g02929 Beta vulgaris HOM05D002474 ORTHO05D006727 5.1e-162 575.1 447 64.7
Peaxi162Scf00059g00319 Petunia axillaris HOM05D002474 ORTHO05D006727 5.1e-162 575.1 461 64.0
VMungo0464G0136 Vigna mungo HOM05D002474 ORTHO05D006727 5.1e-162 575.1 492 59.8
arahy.Tifrunner.gnm1.ann1.DRNA5E Arachis hypogaea HOM05D002474 ORTHO05D006727 5.7e-161 571.6 467 61.9
FAN14G2185 Fragaria x ananassa HOM05D002474 ORTHO05D006727 1.7e-160 570.1 514 57.8
Glyma.19G019000 Glycine max HOM05D002474 ORTHO05D006727 1.1e-159 567.4 477 60.4
Rhsim10G0032000 Rhododendron simsii HOM05D002474 ORTHO05D006727 1.5e-158 563.5 479 62.0
DCAR_011168 Daucus carota HOM05D002474 ORTHO05D006727 7.7e-158 561.2 409 68.5
CANSAT64G2711 Cannabis sativa HOM05D002474 ORTHO05D006727 1.9e-156 556.6 472 61.4
AUR62031654 Chenopodium quinoa HOM05D002474 ORTHO05D006727 3.2e-156 555.8 460 61.3
Sed0010242 Sechium edule HOM05D002474 ORTHO05D006727 8.8e-154 547.7 380 70.0
ClCG09G018440 Citrullus lanatus HOM05D002474 ORTHO05D006727 7.4e-153 544.7 561 52.6
BcaB06g27397 Brassica carinata HOM05D002474 ORTHO05D006727 1.7e-152 543.5 406 66.3
CSS0037906 Camellia sinensis var. sinensis HOM05D002474 ORTHO05D006727 2.2e-152 543.1 350 75.1
Dinv33713 Davidia involucrata HOM05D002474 ORTHO05D006727 1.1e-151 540.8 347 75.2
FAN05G2709 Fragaria x ananassa HOM05D002474 ORTHO05D006727 3.1e-151 539.3 478 58.8
C04p46420 Brassica napus HOM05D002474 ORTHO05D006727 9.1e-151 537.7 406 65.0
FAN09G4837 Fragaria x ananassa HOM05D002474 ORTHO05D006727 3.5e-150 535.8 514 55.4
vmacro05750 Vaccinium macrocarpon HOM05D002474 ORTHO05D006727 5.7e-145 518.5 459 59.3
A04p12710 Brassica napus HOM05D002474 ORTHO05D006727 1.2e-142 510.8 406 62.1
Pp3c23_2270 Physcomitrium patens HOM05D002474 ORTHO05D006727 5.9e-142 508.4 427 58.5
AagrBONN_evm.TU.Sc2ySwM_369.199 Anthoceros agrestis HOM05D002474 ORTHO05D006727 5.0e-141 505.4 438 55.7
SalBow1G0883 Salvia bowleyana HOM05D002474 ORTHO05D006727 2.2e-133 479.9 494 54.5
Mapoly0035s0063 Marchantia polymorpha HOM05D002474 ORTHO05D006727 5.0e-133 478.8 417 57.6
AUR62018296 Chenopodium quinoa HOM05D002474 ORTHO05D006727 4.2e-132 475.7 435 57.2
Prupe.3G272800 Prunus persica HOM05D002474 ORTHO05D006727 5.2e-130 468.8 377 62.1
SMO137G0254 Selaginella moellendorffii HOM05D002474 ORTHO05D006727 1.4e-122 444.1 466 49.4
Hma1.2p1_0449F.1_g154940 Hydrangea macrophylla HOM05D002474 ORTHO05D006727 4.9e-120 435.6 327 66.7
HPP92_014139 Vanilla planifolia HOM05D002474 ORTHO05D006727 2.7e-110 403.3 418 50.7
Manes.S095220 Manihot esculenta HOM05D002474 ORTHO05D006727 2.3e-106 390.2 283 67.1
Cc07_g02920 Coffea canephora HOM05D002474 ORTHO05D006727 3.1e-98 363.2 256 69.1
QL02p080117 Quercus lobata HOM05D002474 ORTHO05D006727 3.4e-89 333.2 277 60.3
CBR_g50657 Chara braunii HOM05D002474 ORTHO05D006727 4.8e-83 312.8 302 50.7
QL02p080121 Quercus lobata HOM05D002474 ORTHO05D006727 1.3e-80 304.7 184 78.3
Cc07_g02930 Coffea canephora HOM05D002474 ORTHO05D006727 1.0e-77 295.0 194 72.2
Rhsim10G0031600 Rhododendron simsii HOM05D002474 ORTHO05D006727 5.6e-76 289.3 235 64.3
Lj7A402G46 Lonicera japonica HOM05D002474 ORTHO05D006727 3.3e-68 263.5 296 52.7
Hund13251 Selenicereus undatus HOM05D002474 ORTHO05D006727 2.0e-65 254.2 204 62.7
BolC4t26228H Brassica oleracea HOM05D002474 ORTHO05D006727 1.0e-64 251.9 192 65.6
Lsat_1_v5_gn_6_77521 Lactuca sativa HOM05D002474 ORTHO05D006727 6.0e-62 242.7 265 54.3
HanXRQChr09g0265421 Helianthus annuus HOM05D002474 ORTHO05D006727 3.2e-55 220.3 126 87.3
Lsat_1_v5_gn_2_107941 Lactuca sativa HOM05D002474 ORTHO05D005260 6.3e-43 179.5 236 45.8
SpUN0485_0010 Schrenkiella parvula HOM05D002474 ORTHO05D006727 2.4e-42 177.6 132 66.7
Lj7A402G47 Lonicera japonica HOM05D002474 ORTHO05D006727 1.4e-39 168.3 96 81.2
CBR_g59258 Chara braunii HOM05D002474 ORTHO05D006727 1.6e-38 164.9 120 64.2
SEGI_13584 Sequoiadendron giganteum HOM05D002474 ORTHO05D006727 2.7e-38 164.1 151 52.3
Actinidia35021 Actinidia chinensis HOM05D002474 ORTHO05D006727 3.1e-34 150.6 317 36.0
SEGI_37465 Sequoiadendron giganteum HOM05D002474 ORTHO05D006727 3.5e-33 147.1 127 55.1
MCO07G529 Micromonas commoda HOM05D002474 ORTHO05D006727 6.5e-32 142.9 452 28.5
Sp7g01810 Schrenkiella parvula HOM05D002474 ORTHO05D006727 1.9e-31 141.4 134 55.2
C09p60950 Brassica napus HOM05D002474 ORTHO05D006727 1.2e-30 138.7 111 60.4
BolC9t56457H Brassica oleracea HOM05D002474 ORTHO05D006727 4.1e-26 123.6 103 59.2
MBI04_g20672_MAGBIO Magnolia biondii HOM05D002474 ORTHO05D006727 8.5e-24 115.9 228 35.1
C09p36190 Brassica napus HOM05D002474 ORTHO05D006727 1.6e-22 111.7 96 57.3
PRCOL_00006911 Prasinoderma coloniale HOM05D002474 ORTHO05D006727 9.1e-18 95.9 496 24.4
MBI04_g20673_MAGBIO Magnolia biondii HOM05D002474 ORTHO05D006727 2.0e-17 94.7 77 55.8
FAN10G3970 Fragaria x ananassa HOM05D002474 ORTHO05D006727 6.5e-16 89.7 48 85.4
BcaC04g18910 Brassica carinata HOM05D002474 ORTHO05D006727 1.1e-15 89.0 109 45.0
Rhsim10G0031800 Rhododendron simsii HOM05D002474 ORTHO05D006727 2.8e-14 84.3 47 76.6
Cre09.g389400 Chlamydomonas reinhardtii HOM05D002474 ORTHO05D006727 1.4e-13 82.0 284 27.8
FAN10G3068 Fragaria x ananassa HOM05D002474 ORTHO05D006727 1.8e-13 81.6 43 86.0
Peaxi162Scf00036g01918 Petunia axillaris HOM05D002474 ORTHO05D006727 1.4e-10 72.0 52 59.6
Peaxi162Scf00781g00210 Petunia axillaris HOM05D002474 ORTHO05D006727 5.4e-10 70.1 52 57.7
vmacro03926 Vaccinium macrocarpon HOM05D002474 ORTHO05D006727 7.8e-09 66.2 38 73.7
vmacro05749 Vaccinium macrocarpon HOM05D002474 ORTHO05D006727 2.3e-08 64.7 37 75.7
Glyma.13G065601 Glycine max HOM05D002474 ORTHO05D006727 1.1e-07 62.4 49 65.3


User provided reference genes

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