Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr17g0546281 Helianthus annuus HOM05D000041 ORTHO05D000146 1.6e-149 532.7 270 100.0
ECA246G2684 Erigeron canadensis HOM05D000041 ORTHO05D000452 1.7e-90 336.7 285 65.6
HanXRQChr01g0030301 Helianthus annuus HOM05D000041 ORTHO05D000452 1.2e-67 260.8 285 52.3
ECA246G4484 Erigeron canadensis HOM05D000041 ORTHO05D000452 8.2e-61 238.0 285 49.5
Lsat_1_v5_gn_1_44000 Lactuca sativa HOM05D000041 ORTHO05D000452 2.6e-59 233.0 287 50.5
ECA248G3694 Erigeron canadensis HOM05D000041 ORTHO05D045257 3.5e-59 232.6 268 48.1
Lsat_1_v5_gn_1_42841 Lactuca sativa HOM05D000041 ORTHO05D000452 1.9e-57 226.9 281 49.5
HanXRQChr01g0030061 Helianthus annuus HOM05D000041 ORTHO05D000452 6.3e-53 211.8 291 42.3
HanXRQChr02g0057341 Helianthus annuus HOM05D000041 ORTHO05D000452 1.7e-50 203.8 278 45.7
HanXRQChr01g0001391 Helianthus annuus HOM05D000041 ORTHO05D000452 1.5e-49 200.7 276 45.3
HanXRQChr11g0347871 Helianthus annuus HOM05D000248 ORTHO05D015639 4.2e-49 199.1 289 43.3
HanXRQChr11g0347381 Helianthus annuus HOM05D000041 ORTHO05D000452 5.5e-49 198.7 286 46.2
HanXRQChr14g0437671 Helianthus annuus HOM05D000041 ORTHO05D000452 5.2e-47 192.2 289 40.8
HanXRQChr14g0439681 Helianthus annuus HOM05D000041 ORTHO05D045248 5.2e-47 192.2 283 44.5
Lsat_1_v5_gn_5_32001 Lactuca sativa HOM05D000041 ORTHO05D000452 9.8e-46 188.0 307 39.4
ECA238G3405 Erigeron canadensis HOM05D000041 ORTHO05D000452 1.3e-45 187.6 288 39.2
ECA248G2291 Erigeron canadensis HOM05D000041 ORTHO05D000452 2.2e-45 186.8 286 43.4
HanXRQChr11g0347721 Helianthus annuus HOM05D000041 ORTHO05D000452 6.3e-45 185.3 290 44.1
HanXRQChr14g0437841 Helianthus annuus HOM05D000041 ORTHO05D000452 1.4e-44 184.1 269 44.2
Lsat_1_v5_gn_1_42681 Lactuca sativa HOM05D000041 ORTHO05D015639 1.4e-44 184.1 301 40.9
ECA236G3795 Erigeron canadensis HOM05D000006 ORTHO05D000452 2.4e-44 183.3 273 43.6
ECA248G3832 Erigeron canadensis HOM05D000041 ORTHO05D000452 1.2e-43 181.0 393 34.1
HanXRQChr14g0433781 Helianthus annuus HOM05D000041 ORTHO05D045257 4.5e-43 179.1 125 70.4
ECA238G4845 Erigeron canadensis HOM05D000041 ORTHO05D000452 1.0e-42 177.9 282 39.7
HanXRQChr01g0001421 Helianthus annuus HOM05D000041 ORTHO05D000452 2.5e-41 173.3 304 41.4
HanXRQChr01g0001411 Helianthus annuus HOM05D000041 ORTHO05D000452 9.5e-41 171.4 319 37.6
ECA238G0060 Erigeron canadensis HOM05D000041 ORTHO05D045248 1.2e-40 171.0 269 40.5
ECA234G3860 Erigeron canadensis HOM05D000041 ORTHO05D015639 1.6e-40 170.6 272 39.7
ECA248G2373 Erigeron canadensis HOM05D000041 ORTHO05D015639 4.0e-39 166.0 279 40.9
ECA248G3439 Erigeron canadensis HOM05D000191 ORTHO05D000452 1.2e-38 164.5 276 36.2
ECA238G2692 Erigeron canadensis HOM05D000041 ORTHO05D000452 2.0e-38 163.7 282 38.3
ECA246G4144 Erigeron canadensis HOM05D000041 ORTHO05D000452 4.4e-38 162.5 277 41.9
ECA248G3842 Erigeron canadensis HOM05D000041 ORTHO05D000452 1.1e-36 157.9 349 35.0
HanXRQChr11g0347731 Helianthus annuus HOM05D000248 ORTHO05D015639 1.8e-36 157.1 271 40.6
ECA240G2908 Erigeron canadensis HOM05D000041 ORTHO05D000452 1.6e-35 154.1 270 38.9
ECA233G3668 Erigeron canadensis HOM05D000041 ORTHO05D035163 2.7e-35 153.3 309 34.0
ECA248G1289 Erigeron canadensis HOM05D000041 ORTHO05D015639 7.8e-35 151.8 284 37.0
ECA234G3463 Erigeron canadensis HOM05D000041 ORTHO05D015639 1.3e-34 151.0 278 37.4
ECA248G2777 Erigeron canadensis HOM05D004140 ORTHO05D000452 1.1e-33 147.9 280 37.1
ECA246G1402 Erigeron canadensis HOM05D000041 ORTHO05D000452 3.3e-33 146.4 282 39.4
HanXRQChr01g0030341 Helianthus annuus HOM05D000041 ORTHO05D000452 4.3e-33 146.0 316 35.4
ECA247G3370 Erigeron canadensis HOM05D000041 ORTHO05D000452 2.2e-29 133.7 287 35.2
ECA248G3709 Erigeron canadensis HOM05D000041 ORTHO05D000452 9.2e-28 128.3 269 34.6
Lsat_1_v5_gn_6_17600 Lactuca sativa HOM05D000041 ORTHO05D035163 3.9e-26 122.9 142 44.4
ECA234G2515 Erigeron canadensis HOM05D000041 ORTHO05D015639 1.8e-23 114.0 229 35.4
HanXRQChr07g0201141 Helianthus annuus HOM05D063110 ORTHO05D225272 1.9e-20 104.0 240 34.2
ECA248G3497 Erigeron canadensis HOM05D000041 ORTHO05D015639 1.3e-18 97.8 226 34.5
ECA246G1126 Erigeron canadensis HOM05D000041 ORTHO05D000452 4.3e-17 92.8 147 44.9
Lsat_1_v5_gn_1_42621 Lactuca sativa HOM05D000041 ORTHO05D000452 5.2e-15 85.9 113 47.8
Lsat_1_v5_gn_1_42641 Lactuca sativa HOM05D000041 ORTHO05D000452 1.2e-14 84.7 115 47.8
Lsat_1_v5_gn_5_32021 Lactuca sativa HOM05D000041 ORTHO05D000452 1.5e-14 84.3 94 47.9
Lsat_1_v5_gn_3_38200 Lactuca sativa HOM05D000041 ORTHO05D000452 3.7e-13 79.7 315 27.0
ECA247G1207 Erigeron canadensis HOM05D000041 ORTHO05D000452 1.0e-10 71.6 110 40.0
ECA247G2178 Erigeron canadensis HOM05D000041 ORTHO05D035134 1.0e-10 71.6 213 28.2
ECA240G0011 Erigeron canadensis HOM05D000041 ORTHO05D000452 1.3e-10 71.2 293 28.0
ECA240G1707 Erigeron canadensis HOM05D000026 ORTHO05D000127 1.3e-10 71.2 51 60.8
HanXRQChr03g0082621 Helianthus annuus HOM05D000041 ORTHO05D000452 2.3e-10 70.5 94 38.3
ECA234G2247 Erigeron canadensis HOM05D000041 ORTHO05D000452 3.9e-10 69.7 49 63.3
HanXRQChr11g0347801 Helianthus annuus HOM05D000248 ORTHO05D015639 3.9e-10 69.7 104 48.1
HanXRQChr03g0081541 Helianthus annuus HOM05D000041 ORTHO05D000452 1.9e-09 67.4 303 27.7
Lsat_1_v5_gn_6_116861 Lactuca sativa HOM05D000041 ORTHO05D000452 3.3e-09 66.6 112 33.0
HanXRQChr13g0404731 Helianthus annuus HOM05D000041 ORTHO05D000452 4.3e-09 66.2 86 40.7
TAR365G0542 Trochodendron aralioides HOM05D000248 ORTHO05D000146 7.3e-09 65.5 98 39.8
Lsat_1_v5_gn_1_42601 Lactuca sativa HOM05D000479 ORTHO05D000452 1.2e-08 64.7 88 47.7
ECA240G4469 Erigeron canadensis HOM05D000041 ORTHO05D015639 1.6e-08 64.3 276 27.2
HanXRQChr13g0411691 Helianthus annuus HOM05D000041 ORTHO05D000452 2.8e-08 63.5 296 29.1
AT2G02240 Arabidopsis thaliana HOM05D000248 ORTHO05D000146 4.7e-08 62.8 88 43.2
AL5G11590 Arabidopsis lyrata HOM05D000248 ORTHO05D000146 6.2e-08 62.4 86 44.2
HanXRQChr01g0001341 Helianthus annuus HOM05D000041 ORTHO05D015639 6.2e-08 62.4 175 30.9
Peaxi162Scf00037g01716 Petunia axillaris HOM05D000248 ORTHO05D000146 1.1e-07 61.6 91 41.8
RcHm_v2.0_Chr6g0255241 Rosa chinensis HOM05D000248 ORTHO05D000146 1.4e-07 61.2 100 43.0
RcHm_v2.0_Chr3g0450281 Rosa chinensis HOM05D000248 ORTHO05D000146 1.8e-07 60.8 89 44.9
Thecc.04G208000 Theobroma cacao HOM05D000248 ORTHO05D000146 1.8e-07 60.8 135 35.6
HanXRQChr05g0136981 Helianthus annuus HOM05D000041 ORTHO05D000452 2.4e-07 60.5 150 34.7
TAR365G0987 Trochodendron aralioides HOM05D000248 ORTHO05D000146 2.4e-07 60.5 98 38.8
Lsat_1_v5_gn_5_58101 Lactuca sativa HOM05D000041 ORTHO05D000452 3.1e-07 60.1 302 24.2
ECA247G0698 Erigeron canadensis HOM05D000041 ORTHO05D035134 4.0e-07 59.7 130 30.0
AL5G11510 Arabidopsis lyrata HOM05D000248 ORTHO05D000146 5.2e-07 59.3 88 43.2
Duzib106G1323 Durio zibethinus HOM05D000248 ORTHO05D000146 5.2e-07 59.3 88 39.8
TAR365G0442 Trochodendron aralioides HOM05D000248 ORTHO05D000146 5.2e-07 59.3 69 44.9
ECA240G1671 Erigeron canadensis HOM05D000041 ORTHO05D000452 6.8e-07 58.9 112 42.0
Actinidia11401 Actinidia chinensis HOM05D000248 ORTHO05D000146 8.9e-07 58.5 313 25.9
Actinidia16834 Actinidia chinensis HOM05D000248 ORTHO05D000146 8.9e-07 58.5 87 40.2
Carub.0005s0130 Capsella rubella HOM05D000248 ORTHO05D000146 8.9e-07 58.5 88 40.9
Dinv28029 Davidia involucrata HOM05D000248 ORTHO05D000146 8.9e-07 58.5 150 29.3
Sopen04g022290 Solanum pennellii HOM05D000248 ORTHO05D000146 8.9e-07 58.5 84 42.9
MD04G1236300 Malus domestica HOM05D000248 ORTHO05D000146 1.2e-06 58.2 85 41.2
Prupe.6G356300 Prunus persica HOM05D000248 ORTHO05D000146 1.2e-06 58.2 85 42.4
Sp2g13630 Schrenkiella parvula HOM05D000248 ORTHO05D000146 1.2e-06 58.2 87 41.4
Solyc04g050990.3 Solanum lycopersicum HOM05D000248 ORTHO05D000146 1.2e-06 58.2 84 42.9
COL.COLO4_20294 Corchorus olitorius HOM05D000248 ORTHO05D000146 1.5e-06 57.8 104 35.6
FvH4_6g01110 Fragaria vesca HOM05D000248 ORTHO05D000146 1.5e-06 57.8 87 44.8
FAN05G5517 Fragaria x ananassa HOM05D000248 ORTHO05D000146 1.5e-06 57.8 87 43.7
Duzib177G0977 Durio zibethinus HOM05D000248 ORTHO05D000146 2.0e-06 57.4 88 39.8
HanXRQChr13g0414981 Helianthus annuus HOM05D000041 ORTHO05D019105 2.0e-06 57.4 310 24.8
RcHm_v2.0_Chr3g0448621 Rosa chinensis HOM05D000248 ORTHO05D000146 2.0e-06 57.4 85 42.4
Sopen01g043520 Solanum pennellii HOM05D000248 ORTHO05D000146 2.0e-06 57.4 88 39.8
Lj6C617T1 Lonicera japonica HOM05D000248 ORTHO05D000146 2.6e-06 57.0 88 40.9
MD12G1255400 Malus domestica HOM05D000248 ORTHO05D000146 2.6e-06 57.0 85 41.2
PGR031G1037 Punica granatum HOM05D000248 ORTHO05D000146 2.6e-06 57.0 87 39.1
RcHm_v2.0_Chr3g0450261 Rosa chinensis HOM05D000248 ORTHO05D000146 2.6e-06 57.0 90 42.2
AT2G02360 Arabidopsis thaliana HOM05D000248 ORTHO05D000146 3.4e-06 56.6 89 40.4
FAN05G1446 Fragaria x ananassa HOM05D000248 ORTHO05D000146 3.4e-06 56.6 87 43.7
Lsat_1_v5_gn_5_62941 Lactuca sativa HOM05D000041 ORTHO05D000452 3.4e-06 56.6 83 38.6
Lsat_1_v5_gn_6_77540 Lactuca sativa HOM05D000041 ORTHO05D000452 3.4e-06 56.6 304 26.0
Thecc.04G207900 Theobroma cacao HOM05D000248 ORTHO05D000146 3.4e-06 56.6 135 31.1
FAN09G3355 Fragaria x ananassa HOM05D000248 ORTHO05D000146 4.4e-06 56.2 87 44.8
HanXRQChr06g0184831 Helianthus annuus HOM05D000041 ORTHO05D222641 4.4e-06 56.2 311 24.1
Lsat_1_v5_gn_1_42741 Lactuca sativa HOM05D000041 ORTHO05D000452 4.4e-06 56.2 177 28.8
PGSC0003DMG400011993 Solanum tuberosum HOM05D000248 ORTHO05D000146 4.4e-06 56.2 69 42.0
AL2G41420 Arabidopsis lyrata HOM05D000248 ORTHO05D000146 5.8e-06 55.8 89 40.4
A02p32730 Brassica napus HOM05D000248 ORTHO05D000146 5.8e-06 55.8 85 41.2
Haze_04110 Corylus avellana HOM05D000248 ORTHO05D000146 5.8e-06 55.8 88 40.9
ECA232G3405 Erigeron canadensis HOM05D000041 ORTHO05D000001 5.8e-06 55.8 96 42.7
HanXRQChr13g0412391 Helianthus annuus HOM05D000041 ORTHO05D019105 5.8e-06 55.8 86 36.0
MD12G1255500 Malus domestica HOM05D000248 ORTHO05D000146 5.8e-06 55.8 85 40.0
Medtr1g026510 Medicago truncatula HOM05D000248 ORTHO05D000146 5.8e-06 55.8 108 33.3
Nn3g19935 Nelumbo nucifera HOM05D000248 ORTHO05D000146 5.8e-06 55.8 76 42.1
GSVIVG01031160001 Vitis vinifera HOM05D000248 ORTHO05D000146 5.8e-06 55.8 73 41.1
COL.COLO4_14834 Corchorus olitorius HOM05D000248 ORTHO05D000146 7.6e-06 55.5 88 37.5
FAN14G2708 Fragaria x ananassa HOM05D000248 ORTHO05D000146 7.6e-06 55.5 87 43.7
Lsat_1_v5_gn_5_58161 Lactuca sativa HOM05D000041 ORTHO05D000452 7.6e-06 55.5 87 37.9
TPR.G14652 Trifolium pratense HOM05D000248 ORTHO05D000146 7.6e-06 55.5 91 41.8
TAR636G3458 Trochodendron aralioides HOM05D000248 ORTHO05D000146 7.6e-06 55.5 73 41.1
BraA02t08288Z Brassica rapa HOM05D000248 ORTHO05D000146 9.9e-06 55.1 85 41.2
HanXRQChr11g0351481 Helianthus annuus HOM05D000041 ORTHO05D000452 9.9e-06 55.1 89 36.0
Lj5g0021023 Lotus japonicus HOM05D000248 ORTHO05D000146 9.9e-06 55.1 84 39.3
Nitab4.5_0006355g0030 Nicotiana tabacum HOM05D000248 ORTHO05D000146 9.9e-06 55.1 73 41.1
Oeu048882.1 Olea europaea HOM05D000248 ORTHO05D000146 9.9e-06 55.1 93 36.6
Solyc01g100000.3 Solanum lycopersicum HOM05D000248 ORTHO05D000146 9.9e-06 55.1 88 37.5
TWI23G0538 Tripterygium wilfordii HOM05D000248 ORTHO05D000146 9.9e-06 55.1 90 40.0


User provided reference genes

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